Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmu05g2010 | ATGGTGAAAACAGCAACCAAAAACGAAAAACTCAACAAACTGGGGACCATTCCAATGGGGATCGGCTATATTCGGAAAACAACCATCGGCCACGGCGAAAAAGCCTCTCGAGCACCGAACCGACCAACCCCAGTCCGGTATAAAACCCCGCCGGAGTCCCCATTCATCTTCATCCCTTCCAAACAGCCCTTGGCGTATCCAAGCCCCAGGCTCCGACGGGCTTTCATTGCTCTTCAAGCCTGGAAGCTTGCTATTTATTCAGACCCTTTAAACACCACCGCCGATTGGGTCTGCGCCGATGTCCGCTCCTACACCAGAGTTTTCTGCTCCCCTGCTCTCGACGATCCCAAACTCGAAGTCGTCGTCGGAATTGACCTTAACCATGCTGACATCGCCGGTTACTTGCCCGTCGAGCTCAATTTGCTGACCGACATTGCTCTATTTCACATCAACAACAACAGATTCTGCAGCATTGTCCCATCGAGCTTCTCCAAGCTTACTCTACTCCACGAGCTTGACATTAGCAACAACAGATTTGTAGGGCATTTCCCTAGAGTGGTTGTGAGAATCCCTAATTTGAAATATATGGACATCAAATACAATGATTTCGAAGTCAAATTGCCTCCTAAGCTTTTTACTAAGGAACTCGATGTCATTTTCCTAAACAATAATAGATTCACTTCTTACATTCTTGAAAATTTTGGGGAATCGACAGCGTCAGTGATTGTGATTGCCGACAACAATTTTACAGGATGTATTATAATGGACATTTCTTTGAATTTGTTGACTAGCGTTATGCAGGATGGTTTGTGCAATTTAGCCAAATTAGTTAATTTCACATTTTCTTACAATTTCTTCAATGGCAAGTGCATTCCCCACCACCACTGGTCCACTCTCCCCCCAGTTTCATCATCCCCACCACCAGTTCACTCAGTTTCATCACCCCCACCACCAGTTCCTTCTCCACCACCACAGGGTTTCATCATCCCCACCACCGATTCACTCTCCACCACCATCGGTTTCATCACCCCACCACCAGTTCACTCTCCACCGCCACCAGTTTTCTCACCTCCCCCACCGGTTTACTCACCACCAGTTTTCTCACCACTGGTGTACGTACTCACCCCCACCATCAGTGCACTCACCTCTACCTCTAGTCCCGTCACTTTCACCTCCAGTATTCTCTCTCCCACCACCTTCCCCATCTTCATCTCCTCCTCCTTCGGTCGCATCTTCGCCGCCTCCACTGTAAGACATCATTCTTCCACCAAACTTAGGTTTCCAATACTCTTCACCACCTCCACCAATATTCCTGGGATATTGATCAGCAAATCATTGAACTCTCATCTTTATTTTAATATTTTTATTTTGAAAACACATACTTTTGAATCTCCGCCTCCTCCTCCTCCTCCTCCTTCTTCTTCTTCTTCTTCTTCTTCTGATACTGCAACTTCCTCTGTTTTCAGTAACCTTCAGAATTTGAAAATGGCGGTTGTCACTGATCCTCTTGCTTCCATGCAGCTTCTCGCCAATACCCTTCAGGCTCCGCCCTATGCGGCAGCCGCCGTTCTGGGTGGCGTCTCTTTAATGCTTTCGGTGTTTCTTGTCGCTGATTGTAGAAAGAAACGTCGGAAATTTCTCCCTCCAGTGCCGGCGATTCCGGGGGTGCCGCTGTTGGGAAATCTGTTGCAGTTGAAGGAGAAGAAGCCTCACATGACGTTTGCACGGTGGGCCGAGACGTACGGTCCGGTTTATTCCATAAGAACCGGCGCTTCCACTGTGATTGTTCTCAACACCGCCGAAGTTGCCAAAGAGGCTATGGTGACGAGATACGCTTCTATTTCTAGTAGAAAGCTAAGCAAAGCCCTCACCATCTTGACTGCTGATAAATGCATGGTTGCTATGAGTGATTACAATGACTTTCACAAGATGGTGAAGAGATACATATTGGCGAATGTCTTGGGGGCTAATGCTCAGAAGAAACACAGACAAAGGAGAGACACCATGATAGAGAATATTTCTAGGGAGTTGTTTGCTCATCTGAAGGATTTTCCATCAGAAACTGTTAATTTTCGAAAAATCTTCGAAGCAGAACTCTTTCGACTGGCTCTTAAAGAAACACTTGGGAAAGATGTTGAGTCGATATATGTCGATGGGCTCGGTACCACACTGCCAAGGGAAGTTCTGTTTAGGGTTTTAGTGATAGATCCAATGGAGGGTGCAATTGAGGTTGATTGGAGGGATTTCTTCCCATATCTGAGATGGATTCCCAACAAGAGTGTGGAGAATAGAATAAAGAATATGGATTTTCGAAGGCGAATGACAATGAAAAGCCTACTTGAGGAGCAGAAGAAACGAATTGCAGCAGGGGAGGAAACGAATTGCTATGCTGATTTCCTGTTATCTGAAGCAAAAACACTTACAGAGGATCAGATATCGATGTTACTTTGGGAGACGATCATTGAAACCTCAGACACGACTCTGGTTGTAACAGAATGGGCTATGTATGAACTTGCAAAAGATCCGAAACGACAGGACTATCTGTATCAGCATATACTGAATGTCTGTGGATCTGCAAAGCTTACTGAAGAAAACCTGTCACAGCTTCCATATTTAACTGCTGTTTTTCATGAAACTCTTCGGAGGCATAGTCCAGTCCCGGTCGTCCCATTGCGATATGCACATGAAGATACCCAGTTAGGTGGGTACTTTGTTCCTGCAGGGAGTGAGATCGCTGTGAACATTTACGCGTGCAACATGGACAAGAATCATTGGGAAAGCCCTGAGGAATGGAAGCCAGAGAGGTTTCTGGATGAGAAGTATGATCCAATGGATCTCCACAAAACCATGGCCTTTGGAGGAGGGAAGAGGGTGTGTGCAGGTGCTCTTAAGGCAATGCTGATAGCTTGCACAACCATTGGAAGGATGGTTCAAGAGTTTGAGTGGAGGCTAAGGGACGGGGAAGAGGACAAAGTGGACACTCTCGGCCTCACGGCTCGCAAGCTCCAGCCTCTGCACGTAGTCGTAAAGCCAAGAATCAACTAA | 3045 | 46.5 | MVKTATKNEKLNKLGTIPMGIGYIRKTTIGHGEKASRAPNRPTPVRYKTPPESPFIFIPSKQPLAYPSPRLRRAFIALQAWKLAIYSDPLNTTADWVCADVRSYTRVFCSPALDDPKLEVVVGIDLNHADIAGYLPVELNLLTDIALFHINNNRFCSIVPSSFSKLTLLHELDISNNRFVGHFPRVVVRIPNLKYMDIKYNDFEVKLPPKLFTKELDVIFLNNNRFTSYILENFGESTASVIVIADNNFTGCIIMDISLNLLTSVMQDGLCNLAKLVNFTFSYNFFNGKCIPHHHWSTLPPVSSSPPPVHSVSSPPPPVPSPPPQGFIIPTTDSLSTTIGFITPPPVHSPPPPVFSPPPPVYSPPVFSPLVYVLTPTISALTSTSSPVTFTSSILSPTTFPIFISSSFGRIFAASTVRHHSSTKLRFPILFTTSTNIPGILISKSLNSHLYFNIFILKTHTFESPPPPPPPPSSSSSSSSDTATSSVFSNLQNLKMAVVTDPLASMQLLANTLQAPPYAAAAVLGGVSLMLSVFLVADCRKKRRKFLPPVPAIPGVPLLGNLLQLKEKKPHMTFARWAETYGPVYSIRTGASTVIVLNTAEVAKEAMVTRYASISSRKLSKALTILTADKCMVAMSDYNDFHKMVKRYILANVLGANAQKKHRQRRDTMIENISRELFAHLKDFPSETVNFRKIFEAELFRLALKETLGKDVESIYVDGLGTTLPREVLFRVLVIDPMEGAIEVDWRDFFPYLRWIPNKSVENRIKNMDFRRRMTMKSLLEEQKKRIAAGEETNCYADFLLSEAKTLTEDQISMLLWETIIETSDTTLVVTEWAMYELAKDPKRQDYLYQHILNVCGSAKLTEENLSQLPYLTAVFHETLRRHSPVPVVPLRYAHEDTQLGGYFVPAGSEIAVNIYACNMDKNHWESPEEWKPERFLDEKYDPMDLHKTMAFGGGKRVCAGALKAMLIACTTIGRMVQEFEWRLRDGEEDKVDTLGLTARKLQPLHVVVKPRIN | 1014 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 29829393 | 29837319 | + | CmPI595203_05g020100.1 | Cmu05g2010 | 416924 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmu05g2010 | 1014 | PANTHER | ENT-KAURENE OXIDASE, CHLOROPLASTIC | 519 | 1012 | IPR044225 | GO:0005506(InterPro)|GO:0005783(PANTHER)|GO:0009686(InterPro)|GO:0009686(PANTHER)|GO:0009707(PANTHER)|GO:0010241(PANTHER)|GO:0010241(InterPro)|GO:0016709(PANTHER)|GO:0020037(InterPro)|GO:0052615(InterPro) | |
| Cmu05g2010 | 1014 | PRINTS | E-class P450 group I signature | 914 | 938 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g2010 | 1014 | PRINTS | E-class P450 group I signature | 873 | 891 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g2010 | 1014 | PRINTS | E-class P450 group I signature | 949 | 959 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g2010 | 1014 | PRINTS | E-class P450 group I signature | 959 | 982 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g2010 | 1014 | PRINTS | E-class P450 group I signature | 831 | 857 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g2010 | 1014 | PRINTS | E-class P450 group I signature | 602 | 623 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g2010 | 1014 | PRINTS | E-class P450 group I signature | 578 | 597 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g2010 | 1014 | Gene3D | Cytochrome P450 | 534 | 1010 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g2010 | 1014 | FunFam | Leucine-rich repeat extensin-like protein 1 | 75 | 236 | - | - | |
| Cmu05g2010 | 1014 | FunFam | Ent-kaurene oxidase 2 | 541 | 1014 | - | - | |
| Cmu05g2010 | 1014 | MobiDBLite | consensus disorder prediction | 463 | 484 | - | - | |
| Cmu05g2010 | 1014 | SUPERFAMILY | Cytochrome P450 | 548 | 1012 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g2010 | 1014 | CDD | CYP77_89 | 580 | 1006 | - | - | |
| Cmu05g2010 | 1014 | SUPERFAMILY | L domain-like | 84 | 293 | - | - | |
| Cmu05g2010 | 1014 | Gene3D | Ribonuclease Inhibitor | 76 | 306 | IPR032675 | - | |
| Cmu05g2010 | 1014 | Pfam | Leucine rich repeat | 149 | 203 | IPR001611 | GO:0005515(InterPro) | |
| Cmu05g2010 | 1014 | Pfam | Cytochrome P450 | 554 | 993 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g2010 | 1014 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 952 | 961 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmu05g2010 | Cmu-Chr5:29829393 | Cmu10g2380 | Cmu-Chr10:30224754 | 1.10E-53 | dispersed | |
| Cmu05g2004 | Cmu-Chr5:29775779 | Cmu05g2010 | Cmu-Chr5:29829393 | 1.00E-24 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmu05g2010 | K04122 | - | csv:101209283 | 972.615 |