Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g2039 ATGTCCACGAGGAGCGAACATCATACAGTCCCGCTCTCTGTGCTCCTAAGGCGTGAATTGGCGATTGAGAAGATTGAGAGACCAGAAATCTTACATGGTCAGGCGAGTCAGAGTAAGAAAGGGGAGGATTTTACATTGCTAAAGACGGAATGCGAGAGAGTGGTAGGAGATGGAGTCTCAACGTATTCGGTTTTTGGGCTTTTTGATGGACATAATGGATCTGCTGCTGCTATTTATGCTAAGGAGAATTTATTGAACAATGTTTTAGCTGCTATTCCATCAGATCTCAACAGAGACGAATGGATTGCAGCATTGCCAAGGGCCTTGGTTGCAGGTTTTGTGAAGACGGACAAAGATTTTCAAGAGAAAGCACAAACATCAGGAACCACTGTTACTTTCATGATTATTGAGGGATGGGTTCTCACTGTTGCTTCTGTTGGTGATTCCCGTTGCACTTTGGAATCAGCTGAAGGTGACATCTACTACTTATCAGCAGATCATAGACTAGAATGCAACGAAGAAGAGAGAGAACGTATAATTGCTAGTGGTGGTGAGGTGGGTCGGCTGAATACTGGTGGTGGTGCAGAGATTGGTCCATTGAGATGCTGGCCTGGTGGCTTATGTCTATCACGATCAATTGGTGATATGGATGTTGGCGAGTTTATAGTGCCTGTTCCCTACGTGAAGCAAGTTAAGCTATCTTCTACTGGTGGTAGGGTTATTATTTCAAGTGATGGTGTTTGGGATGCTTTATCAGCTGAAACTGCCTTTGATTGTTGTCGGGGGATGCCAGTAGAAACTGCTGCCGCACAGATTGTGAAAGAAGCAGTACAGTCAAAGGGACTTCGAGATGATACTACATGTATTGTGATTGACATATTACCAAGGGAGAAACCATCTACTGCTTTGCCGCCACCGAAGAAGCAGGTAAAAGGAATGTTTAAATCAATGTTCCGCAAAAAGTCTTCTGAATCATCTTCTCATTTTGAGAAAGAATATAATGAGCCAGATGTTGTCGAGGAATTATTTGAGGAAGGATCGGCTATGCTGTCAGAAAGGTTAGATGCCAAGTATCCTATCTGCAACATGTTTAAGCTATTTGTATGTGCAGTATGCCAAATTGAGATCCAACCTCGGGAGGGTATCTCCATATATGCCGGCTCATCTAACAGAGGAAAATTGCGCGCTTGGGATGGACCTTTTCTATGCTTAAGTTGCACAGAGAAGAAAGAAGCTATGGAAGGGAAAAGACCATCTGGAGATAGACACAGCAGTGGAAGTGACTAG 1287 43.75 MSTRSEHHTVPLSVLLRRELAIEKIERPEILHGQASQSKKGEDFTLLKTECERVVGDGVSTYSVFGLFDGHNGSAAAIYAKENLLNNVLAAIPSDLNRDEWIAALPRALVAGFVKTDKDFQEKAQTSGTTVTFMIIEGWVLTVASVGDSRCTLESAEGDIYYLSADHRLECNEEERERIIASGGEVGRLNTGGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPVPYVKQVKLSSTGGRVIISSDGVWDALSAETAFDCCRGMPVETAAAQIVKEAVQSKGLRDDTTCIVIDILPREKPSTALPPPKKQVKGMFKSMFRKKSSESSSHFEKEYNEPDVVEELFEEGSAMLSERLDAKYPICNMFKLFVCAVCQIEIQPREGISIYAGSSNRGKLRAWDGPFLCLSCTEKKEAMEGKRPSGDRHSSGSD 428
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 30096919 30100317 + CmPI595203_05g020390.1 Cmu05g2039 416953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g2039 428 Gene3D - 32 301 IPR036457 -
Cmu05g2039 428 Pfam Protein phosphatase 2C 54 278 IPR001932 -
Cmu05g2039 428 PANTHER PROTEIN PHOSPHATASE 32 292 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cmu05g2039 428 SMART PP2C_4 26 291 IPR001932 -
Cmu05g2039 428 SUPERFAMILY PP2C-like 38 293 IPR036457 -
Cmu05g2039 428 FunFam probable protein phosphatase 2C 12 32 299 - -
Cmu05g2039 428 SMART PP2C_SIG_2 46 293 IPR001932 -
Cmu05g2039 428 CDD PP2Cc 39 293 IPR001932 -
Cmu05g2039 428 ProSiteProfiles PPM-type phosphatase domain profile. 31 293 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g2039 Cmu-Chr5:30096919 Cmu05g2311 Cmu-Chr5:32389715 1.70E-130 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g2039 - - - 0.0