Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g2048 ATGGGCGAGATTTTTGTATCTGTTTTGGTGTTTTTTCTCACTCTATTATGGTACATTTCTTTAAAGAGAAACAAGAAGGAAGCCATTAAAAATGGAACTAAGCTCCCTCCTGGTTCTTTGGGATGGCCTTATATTGGAGAAACCCTTCAACTCTATTCTCAAGACCCTGAATCTTTCTTCGCCACCAAACAGAAAAGGTATGGGGAGATTTTCAAGACGCATATACTTGGATGTCCTTGTGTGATGTTGGCTAGTCCTGAGGCAGCAAGGTTTGTGCTAATGACACAGGCTCATTTGTTCAAGCCAACTTACCCCAAAAGCAAAGAACTTTTGATTGGCCCCTCTGCTCTGTTTTTTCACCAAGGTGACTACCATTGCCGTCTGAGGAAACTGGTTCAGAACTCTCTTTCTTTGGATGCCATCCGCACCTTAGTCCCCGATATCGACTCCGCCACCGCTTCCGCCCTTGACTCCTGGGCCAGTTCCGTACTCATTAGCACCTTTCATGAAATGAAAAAGATATCATTTGAAGTTGGGATATTGACCATTTTTGGCCATTTGGAAGCGGCTTACAAAGAGGAGCTTAAAAACAACTATAGCATATTGGACGCAGGCTACAATTCTTTTCCCACCAACATTCCCGGAACTCCATACAAAAAGGCACTCTCAGCAAGAAAGCGGCTAAGTAAAATCCTAGGTGACATAATCCATGAGAGAAGAGAAAAAAGACTGGGGGAAAAGGATCTATTGGGAAGCCTTCTAAACTCCATTGATGATGAAGGTGAAGTTAAAATAAGCGATGCCCAAATAGCAGATAACATAATAGGAGTGCTTTTTGCAGCTCAAGACACCACTGCCAGTGTCATGACTTGGATTGTTAAGTACCTCCATGACCAACCTAAGCTTCTTCAATCCGTAAAGGAAGAGCAAGAGGAAATTAAAAAATTAAATTGTGAGAATAATCAAGGGTTGAACTGGGTTCAGACAAGAAACATGCCAATGAGTTACAAGGTGGTATTGGAGAGCTTAAGGATGGCGAGCATTATATCGTTCACTTTTAGAGAGGCTGTAGCTGATGTGGAATACAAAGGATACTTGATTCCAAAAGGTTGGAAAGTGATGCCTTTGTTCAGAAACATCCATCATAGTCCAGAATATTTCCCCGATCCTCACAATTTCGACCCTTCTAGATTTGAGGTTGCACGAAAACCCAATACATTTATGCCGTTTGGCAGTGGAGTTCATGCCTGCCCAGGAAATGAACTTGCAAAGCTGGAGATGTTGATCATGATTCATCATCTAGTCACCAAGTTCAGTTGGCAGGTGGGAATTGGTTGGTACGCAAAACAGGGTTCAACACAGTCCATTTCCCGTTCCCTTGCAAGGCCTTCCAGCCAGATTTTGGAAGATAGGCCATTAGAAAACTGTACACGAGAATATGAGCCCGCACTAAGTGGGCCGATTTGCCATCAATTCAAAGCCCAGTCCAAACCAAAGCCCATGCCCAAGCCCAATCATTTTCTTGTCCTTCCCAACTTACCCCTCCCCCTACTCCTACGCTGTCGTTTCGAGAATCCATTTTCTCCTCTCCCCACATCGATCTTGTTAAAACCCCATTGTATCCCCCATAACTGTAAACGCCAGAGCTTTGTCTACGCTCCATTTTCCTCCATCTCTCTCTCTCCAAGTTTTGCTCTCACGTCGTTGCCAATGGCGAACTCCGCTGATTCTCCCCTCAAATCCGATGCTCTTTTGGAGCAGATGAAGCAGTATCTCACCACCGATGCTGGAAAAGAGATCCTCAAGAAAGTCGGCCATGTTTATCAGATCAATATTTCTCCCAAGAAAATTGGAACTGATGAGGTGGTTTATACCATTGATCTCAAGAAAGGGGAAGTTACCAAAGGTCCATATGAAGGAGGAAAGCCAGACGCTACCTTATCCTTCAAGGACGAAGATTTCGTTAAAATTGCTTTGGGGAAGCTGAATCCTCAGATTGCTTTCTTGAGGGGTGCTCTGAAAATCAAGGGCAGCATCGCCGCGGCACAGAAATTCACTCCCGACATCTTCCCCAAGCCTGCTAAGTTATGA 2091 44.24 MGEIFVSVLVFFLTLLWYISLKRNKKEAIKNGTKLPPGSLGWPYIGETLQLYSQDPESFFATKQKRYGEIFKTHILGCPCVMLASPEAARFVLMTQAHLFKPTYPKSKELLIGPSALFFHQGDYHCRLRKLVQNSLSLDAIRTLVPDIDSATASALDSWASSVLISTFHEMKKISFEVGILTIFGHLEAAYKEELKNNYSILDAGYNSFPTNIPGTPYKKALSARKRLSKILGDIIHERREKRLGEKDLLGSLLNSIDDEGEVKISDAQIADNIIGVLFAAQDTTASVMTWIVKYLHDQPKLLQSVKEEQEEIKKLNCENNQGLNWVQTRNMPMSYKVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVMPLFRNIHHSPEYFPDPHNFDPSRFEVARKPNTFMPFGSGVHACPGNELAKLEMLIMIHHLVTKFSWQVGIGWYAKQGSTQSISRSLARPSSQILEDRPLENCTREYEPALSGPICHQFKAQSKPKPMPKPNHFLVLPNLPLPLLLRCRFENPFSPLPTSILLKPHCIPHNCKRQSFVYAPFSSISLSPSFALTSLPMANSADSPLKSDALLEQMKQYLTTDAGKEILKKVGHVYQINISPKKIGTDEVVYTIDLKKGEVTKGPYEGGKPDATLSFKDEDFVKIALGKLNPQIAFLRGALKIKGSIAAAQKFTPDIFPKPAKL 696
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 30172088 30178831 - CmPI595203_05g020480.1 Cmu05g2048 416962
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g2048 696 Gene3D Cytochrome P450 24 453 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2048 696 FunFam Abscisic acid 8 25 452 - -
Cmu05g2048 696 Pfam SCP-2 sterol transfer family 591 686 IPR003033 -
Cmu05g2048 696 PRINTS P450 superfamily signature 408 417 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2048 696 PRINTS P450 superfamily signature 280 297 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2048 696 PRINTS P450 superfamily signature 337 348 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2048 696 PRINTS P450 superfamily signature 417 428 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2048 696 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 410 419 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cmu05g2048 696 Gene3D - 574 695 IPR036527 -
Cmu05g2048 696 PRINTS E-class P450 group I signature 407 417 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2048 696 PRINTS E-class P450 group I signature 289 315 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2048 696 PRINTS E-class P450 group I signature 269 286 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2048 696 PRINTS E-class P450 group I signature 336 354 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2048 696 PRINTS E-class P450 group I signature 417 440 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2048 696 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2048 696 PRINTS E-class P450 group I signature 376 400 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2048 696 Pfam Cytochrome P450 36 442 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2048 696 PANTHER CYTOCHROME P450 26 34 442 - GO:0004497(PANTHER)|GO:0010295(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)
Cmu05g2048 696 FunFam Non-specific lipid-transfer protein-like 1 574 690 - -
Cmu05g2048 696 CDD CYP90-like 64 442 - -
Cmu05g2048 696 SUPERFAMILY Cytochrome P450 33 445 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2048 696 SUPERFAMILY SCP-like 578 693 IPR036527 -
Cmu05g2048 696 Coils Coil 299 319 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g0628 Cmu-Chr2:6130004 Cmu05g2048 Cmu-Chr5:30172088 3.70E-174 dispersed
Cmu05g2048 Cmu-Chr5:30172088 Cmu07g1095 Cmu-Chr7:25998880 1.60E-149 dispersed
Cmu03g0754 Cmu-Chr3:1674895 Cmu05g2048 Cmu-Chr5:30172088 2.40E-142 transposed
Cmu05g2048 Cmu-Chr5:30172088 Cmu08g1530 Cmu-Chr8:27131960 6.00E-173 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g2048 K09843 - csv:101213916 812.757