Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu05g2048 | ATGGGCGAGATTTTTGTATCTGTTTTGGTGTTTTTTCTCACTCTATTATGGTACATTTCTTTAAAGAGAAACAAGAAGGAAGCCATTAAAAATGGAACTAAGCTCCCTCCTGGTTCTTTGGGATGGCCTTATATTGGAGAAACCCTTCAACTCTATTCTCAAGACCCTGAATCTTTCTTCGCCACCAAACAGAAAAGGTATGGGGAGATTTTCAAGACGCATATACTTGGATGTCCTTGTGTGATGTTGGCTAGTCCTGAGGCAGCAAGGTTTGTGCTAATGACACAGGCTCATTTGTTCAAGCCAACTTACCCCAAAAGCAAAGAACTTTTGATTGGCCCCTCTGCTCTGTTTTTTCACCAAGGTGACTACCATTGCCGTCTGAGGAAACTGGTTCAGAACTCTCTTTCTTTGGATGCCATCCGCACCTTAGTCCCCGATATCGACTCCGCCACCGCTTCCGCCCTTGACTCCTGGGCCAGTTCCGTACTCATTAGCACCTTTCATGAAATGAAAAAGATATCATTTGAAGTTGGGATATTGACCATTTTTGGCCATTTGGAAGCGGCTTACAAAGAGGAGCTTAAAAACAACTATAGCATATTGGACGCAGGCTACAATTCTTTTCCCACCAACATTCCCGGAACTCCATACAAAAAGGCACTCTCAGCAAGAAAGCGGCTAAGTAAAATCCTAGGTGACATAATCCATGAGAGAAGAGAAAAAAGACTGGGGGAAAAGGATCTATTGGGAAGCCTTCTAAACTCCATTGATGATGAAGGTGAAGTTAAAATAAGCGATGCCCAAATAGCAGATAACATAATAGGAGTGCTTTTTGCAGCTCAAGACACCACTGCCAGTGTCATGACTTGGATTGTTAAGTACCTCCATGACCAACCTAAGCTTCTTCAATCCGTAAAGGAAGAGCAAGAGGAAATTAAAAAATTAAATTGTGAGAATAATCAAGGGTTGAACTGGGTTCAGACAAGAAACATGCCAATGAGTTACAAGGTGGTATTGGAGAGCTTAAGGATGGCGAGCATTATATCGTTCACTTTTAGAGAGGCTGTAGCTGATGTGGAATACAAAGGATACTTGATTCCAAAAGGTTGGAAAGTGATGCCTTTGTTCAGAAACATCCATCATAGTCCAGAATATTTCCCCGATCCTCACAATTTCGACCCTTCTAGATTTGAGGTTGCACGAAAACCCAATACATTTATGCCGTTTGGCAGTGGAGTTCATGCCTGCCCAGGAAATGAACTTGCAAAGCTGGAGATGTTGATCATGATTCATCATCTAGTCACCAAGTTCAGTTGGCAGGTGGGAATTGGTTGGTACGCAAAACAGGGTTCAACACAGTCCATTTCCCGTTCCCTTGCAAGGCCTTCCAGCCAGATTTTGGAAGATAGGCCATTAGAAAACTGTACACGAGAATATGAGCCCGCACTAAGTGGGCCGATTTGCCATCAATTCAAAGCCCAGTCCAAACCAAAGCCCATGCCCAAGCCCAATCATTTTCTTGTCCTTCCCAACTTACCCCTCCCCCTACTCCTACGCTGTCGTTTCGAGAATCCATTTTCTCCTCTCCCCACATCGATCTTGTTAAAACCCCATTGTATCCCCCATAACTGTAAACGCCAGAGCTTTGTCTACGCTCCATTTTCCTCCATCTCTCTCTCTCCAAGTTTTGCTCTCACGTCGTTGCCAATGGCGAACTCCGCTGATTCTCCCCTCAAATCCGATGCTCTTTTGGAGCAGATGAAGCAGTATCTCACCACCGATGCTGGAAAAGAGATCCTCAAGAAAGTCGGCCATGTTTATCAGATCAATATTTCTCCCAAGAAAATTGGAACTGATGAGGTGGTTTATACCATTGATCTCAAGAAAGGGGAAGTTACCAAAGGTCCATATGAAGGAGGAAAGCCAGACGCTACCTTATCCTTCAAGGACGAAGATTTCGTTAAAATTGCTTTGGGGAAGCTGAATCCTCAGATTGCTTTCTTGAGGGGTGCTCTGAAAATCAAGGGCAGCATCGCCGCGGCACAGAAATTCACTCCCGACATCTTCCCCAAGCCTGCTAAGTTATGA | 2091 | 44.24 | MGEIFVSVLVFFLTLLWYISLKRNKKEAIKNGTKLPPGSLGWPYIGETLQLYSQDPESFFATKQKRYGEIFKTHILGCPCVMLASPEAARFVLMTQAHLFKPTYPKSKELLIGPSALFFHQGDYHCRLRKLVQNSLSLDAIRTLVPDIDSATASALDSWASSVLISTFHEMKKISFEVGILTIFGHLEAAYKEELKNNYSILDAGYNSFPTNIPGTPYKKALSARKRLSKILGDIIHERREKRLGEKDLLGSLLNSIDDEGEVKISDAQIADNIIGVLFAAQDTTASVMTWIVKYLHDQPKLLQSVKEEQEEIKKLNCENNQGLNWVQTRNMPMSYKVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVMPLFRNIHHSPEYFPDPHNFDPSRFEVARKPNTFMPFGSGVHACPGNELAKLEMLIMIHHLVTKFSWQVGIGWYAKQGSTQSISRSLARPSSQILEDRPLENCTREYEPALSGPICHQFKAQSKPKPMPKPNHFLVLPNLPLPLLLRCRFENPFSPLPTSILLKPHCIPHNCKRQSFVYAPFSSISLSPSFALTSLPMANSADSPLKSDALLEQMKQYLTTDAGKEILKKVGHVYQINISPKKIGTDEVVYTIDLKKGEVTKGPYEGGKPDATLSFKDEDFVKIALGKLNPQIAFLRGALKIKGSIAAAQKFTPDIFPKPAKL | 696 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 30172088 | 30178831 | - | CmPI595203_05g020480.1 | Cmu05g2048 | 416962 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu05g2048 | 696 | Gene3D | Cytochrome P450 | 24 | 453 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cmu05g2048 | 696 | FunFam | Abscisic acid 8 | 25 | 452 | - | - | |
Cmu05g2048 | 696 | Pfam | SCP-2 sterol transfer family | 591 | 686 | IPR003033 | - | |
Cmu05g2048 | 696 | PRINTS | P450 superfamily signature | 408 | 417 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cmu05g2048 | 696 | PRINTS | P450 superfamily signature | 280 | 297 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cmu05g2048 | 696 | PRINTS | P450 superfamily signature | 337 | 348 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cmu05g2048 | 696 | PRINTS | P450 superfamily signature | 417 | 428 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cmu05g2048 | 696 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 410 | 419 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
Cmu05g2048 | 696 | Gene3D | - | 574 | 695 | IPR036527 | - | |
Cmu05g2048 | 696 | PRINTS | E-class P450 group I signature | 407 | 417 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cmu05g2048 | 696 | PRINTS | E-class P450 group I signature | 289 | 315 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cmu05g2048 | 696 | PRINTS | E-class P450 group I signature | 269 | 286 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cmu05g2048 | 696 | PRINTS | E-class P450 group I signature | 336 | 354 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cmu05g2048 | 696 | PRINTS | E-class P450 group I signature | 417 | 440 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cmu05g2048 | 696 | PRINTS | E-class P450 group I signature | 64 | 83 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cmu05g2048 | 696 | PRINTS | E-class P450 group I signature | 376 | 400 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cmu05g2048 | 696 | Pfam | Cytochrome P450 | 36 | 442 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cmu05g2048 | 696 | PANTHER | CYTOCHROME P450 26 | 34 | 442 | - | GO:0004497(PANTHER)|GO:0010295(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER) | |
Cmu05g2048 | 696 | FunFam | Non-specific lipid-transfer protein-like 1 | 574 | 690 | - | - | |
Cmu05g2048 | 696 | CDD | CYP90-like | 64 | 442 | - | - | |
Cmu05g2048 | 696 | SUPERFAMILY | Cytochrome P450 | 33 | 445 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cmu05g2048 | 696 | SUPERFAMILY | SCP-like | 578 | 693 | IPR036527 | - | |
Cmu05g2048 | 696 | Coils | Coil | 299 | 319 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu02g0628 | Cmu-Chr2:6130004 | Cmu05g2048 | Cmu-Chr5:30172088 | 3.70E-174 | dispersed | |
Cmu05g2048 | Cmu-Chr5:30172088 | Cmu07g1095 | Cmu-Chr7:25998880 | 1.60E-149 | dispersed | |
Cmu03g0754 | Cmu-Chr3:1674895 | Cmu05g2048 | Cmu-Chr5:30172088 | 2.40E-142 | transposed | |
Cmu05g2048 | Cmu-Chr5:30172088 | Cmu08g1530 | Cmu-Chr8:27131960 | 6.00E-173 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu05g2048 | K09843 | - | csv:101213916 | 812.757 |