Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g2127 ATGGCCATTCTTGTTTTCCGCTTCTCTATTCTCTCCGTTCTTCTTTTTCAAGTCCTCTCCGCCAACTCTTGGTGGACGGTGAAGTTTCTTCCTGGATTTTCAGGTCCTCTTCCTTTCGTACTCGAAACTGGATACGTGGGAGTTGGGGATAATGAGGAAGTCCAATTGTTTTACTATTTTGTAAAATCACAAGGAAATCCTCAAAAAGATCCTCTCCTTTTGTGGCACACCGGCGGCCCCGGTTGCTCCGGTTTATCTGGACTCGCATTTGAAATTGATTTGCCCGTCGGTACTGGATTTTCGTATGCTAAAACTCCCCAAGCTCTCCAGACGGGAGATTTTGGTCAAGTTCAAACTTCTCATCAATTCTTGAGAAAGTGGTTGGTCGAGTATCATCCAGAATTTATATCTAATCCATTCTATGTTGGTGGAGACTCATATTCTGGTCTTATTGTTCCCGTTGTTACTCATGAAATATTAGAAGGAAATAAACGTGTTTTGCCATTAGTAAATCTTCAGGGATACATATTGGGAAATCCTATCACTATCCGTAATTCACATAAAAATTTTGCAATCCCTTTTGCTCATAGAATGACACTCATCTCTGATGAATTATTCGAGTCTTTGACGACTAGTTGCAATGGAGAGTATGTGAACATTGATCCTACTAATGTTGAGTGCTTGAGACATTATGATACCTACGAAAAGAGTGTTTCAAAAATTTACGATGGGAATATTTTGTTGCCAAAATGTCCCTCGGCATCTTGGAAATTACAAGATATGTCTGCTCGAAGATCTCTCTACAAAACTCCCAAAGTACTCCGTGATCTAAAGCTACCACTTCCAACTCTTGGCTGTCCTACATATAAATACTTACTTTCTCACTACTGGGCTAACGATAATCAAGTTCGAAAAGCGCTTCACATTCAAGAGAGAAGCATTGGAGAATGGACAAGATGTCAGTATAGAGATGATTACAGTTTTGATATTGACAGTTCATTGCCGTATCATGTGAACCTTAGCTCTAAAGGTTATCGATCTTTAATCTATAGTGGAGATCACGATATGGTGGTGTCTCATTTAGACACTCAAGCATGGATTAAATCTTTAAATTATTCCATTGTTGATGACTGGAGGCCATGGTTCGTCATGGATCAAGTAGCGGGATACACGAGAACCTTTGCAAATAAGATGACATTTGCAACAATAAAGGGTGGAGGGCATACAGCAGAATACACACGACAAGAATGTAGCATCATTTTCAATAGATGGATAACTAATAAATCATTGTAA 1293 39.37 MAILVFRFSILSVLLFQVLSANSWWTVKFLPGFSGPLPFVLETGYVGVGDNEEVQLFYYFVKSQGNPQKDPLLLWHTGGPGCSGLSGLAFEIDLPVGTGFSYAKTPQALQTGDFGQVQTSHQFLRKWLVEYHPEFISNPFYVGGDSYSGLIVPVVTHEILEGNKRVLPLVNLQGYILGNPITIRNSHKNFAIPFAHRMTLISDELFESLTTSCNGEYVNIDPTNVECLRHYDTYEKSVSKIYDGNILLPKCPSASWKLQDMSARRSLYKTPKVLRDLKLPLPTLGCPTYKYLLSHYWANDNQVRKALHIQERSIGEWTRCQYRDDYSFDIDSSLPYHVNLSSKGYRSLIYSGDHDMVVSHLDTQAWIKSLNYSIVDDWRPWFVMDQVAGYTRTFANKMTFATIKGGGHTAEYTRQECSIIFNRWITNKSL 430
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 30754177 30757764 - CmPI595203_05g021270.1 Cmu05g2127 417041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g2127 430 Gene3D - 286 430 - -
Cmu05g2127 430 Gene3D alpha/beta hydrolase 22 90 IPR029058 -
Cmu05g2127 430 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 153 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cmu05g2127 430 PRINTS Carboxypeptidase C serine protease (S10) family signature 92 102 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cmu05g2127 430 PRINTS Carboxypeptidase C serine protease (S10) family signature 398 411 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cmu05g2127 430 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 26 92 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)|GO:0016747(PANTHER)|GO:0019748(PANTHER)
Cmu05g2127 430 Pfam Serine carboxypeptidase 92 427 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cmu05g2127 430 FunFam Carboxypeptidase 285 429 - -
Cmu05g2127 430 Gene3D alpha/beta hydrolase 91 253 IPR029058 -
Cmu05g2127 430 SUPERFAMILY alpha/beta-Hydrolases 27 428 IPR029058 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g2127 Cmu-Chr5:30754177 Cmu05g2129 Cmu-Chr5:30777488 8.50E-170 dispersed
Cmu05g2127 Cmu-Chr5:30754177 Cmu05g2128 Cmu-Chr5:30762808 1.00E-167 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g2127 K16296 - csv:101207623 529.25