Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g2128 ATGATCCTCCTCCGCCTCTCTGTTTTCGCTGTTGTTCTTTTTCAGATATCCTCCGCCGTGGGCGCCGGCACAAGGTCTTACTGGACGGTGAAGTCCTTGCCGGGATTGTCGGGGCCTCTGCCTTTCGAGCTGGAAACAGGATACGTAGGAGTGGGAAATTCGGAGGAATTTCAGCTGTTTTATTATTTTATCAAATCTTATGGAAATCCCAAAACGGATCCTCTGATTTTGTGGCTCACTGGAGGCCCCCGTTGCTCTACTCTCTCTGGAATTGCCTTTGAAAGTGGTCCAATAAATTTTGAGGGAGAACCTAAAAATGGGAGCATTCCTCAAATAATCTTGAACCCTTACTCATGGACCAAGAAATCCAGTATAATATATATAGACTTACCGGTTGGCACGGGTTTTTCATATGCTAAAACTTCAAAAGATCATAAATCAGGAGATTATGAACAAGTTCACCATTCCCTTCAATTTTTGAGAAAGTGGTTGGTCAATCATCCAGAATTTATATCAAATCCATTCTATGTTGCTGGAGATTCTTACGCTGGTATGATTGTTCCAGTTGTTGTTAAAGAAATTTTAGAAGGAAATGATAAACATATTTTTCCATTCATAAATTTTCAGGGATACATATTGGGAAATCCTATCACTACCCCTCATTCAAATAAAAATTTTGAAATCCCATTTGCTCATAACATGGCCCTCATCTCGGATGAATTGTTTGAGTCGTTGAAAACTAGTTGCCAAGGAGAATACGTGAACATCGATCCAAATAACGTGGAGTGCTTAAGACATCATGATATGTTTAAAAAGTGTACTTCTACCGTTCTAGATGGATGTATTTTATGGCCCAAGTGTTCATCTTTGAAAGAACCAGATGTGTCTGAACCAAATATGTTTGATACTCATAGATCTCTCTACAACGTTCCTGTTGATCGTAGATGTCGTGTGTATGACTACCTTCTTGCTTATTATTGGGCTAACAATGACCAAGTTCGAAAAGCACTTCATATACGTGAGGGAAGCATTGGAGAATGGATTAGATGTCGTGATAGAGATCATTACAATGTTGAGCATGATAGTGTTTTTCCTTATCACGTGAACCTTAGTTCTAAAGGTTATCGATCACTAGTCTATAGCGGAGACCATGATATGATAGTATCGCATATGGACACTCAAGCATGGATCAAATCTCTAAATTATTCTATAGTAGATGATTGGAGGCCATGGTACATCGATGATGAAGTTGCCGGATACACGAGAAGTTTTGCAAATAAGATGACATTTGCAACTCTAAAAGGTGGAGGACATACAGCAGAATATAAGCGTAAAGAATGCAGCATATTATTTAATAGATGGATAGTGGGAGAATCCTTATAA 1383 38.97 MILLRLSVFAVVLFQISSAVGAGTRSYWTVKSLPGLSGPLPFELETGYVGVGNSEEFQLFYYFIKSYGNPKTDPLILWLTGGPRCSTLSGIAFESGPINFEGEPKNGSIPQIILNPYSWTKKSSIIYIDLPVGTGFSYAKTSKDHKSGDYEQVHHSLQFLRKWLVNHPEFISNPFYVAGDSYAGMIVPVVVKEILEGNDKHIFPFINFQGYILGNPITTPHSNKNFEIPFAHNMALISDELFESLKTSCQGEYVNIDPNNVECLRHHDMFKKCTSTVLDGCILWPKCSSLKEPDVSEPNMFDTHRSLYNVPVDRRCRVYDYLLAYYWANNDQVRKALHIREGSIGEWIRCRDRDHYNVEHDSVFPYHVNLSSKGYRSLVYSGDHDMIVSHMDTQAWIKSLNYSIVDDWRPWYIDDEVAGYTRSFANKMTFATLKGGGHTAEYKRKECSILFNRWIVGESL 460
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 30762808 30768033 - CmPI595203_05g021280.1 Cmu05g2128 417042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g2128 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 138 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cmu05g2128 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 163 188 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cmu05g2128 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 115 127 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cmu05g2128 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 428 441 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cmu05g2128 460 Gene3D alpha/beta hydrolase 33 460 IPR029058 -
Cmu05g2128 460 FunFam Serine carboxypeptidase-like 11 24 460 - -
Cmu05g2128 460 Pfam Serine carboxypeptidase 34 456 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cmu05g2128 460 SUPERFAMILY alpha/beta-Hydrolases 29 457 IPR029058 -
Cmu05g2128 460 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 29 454 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)|GO:0016747(PANTHER)|GO:0019748(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g2128 Cmu-Chr5:30762808 Cmu05g2714 Cmu-Chr5:35606322 2.20E-184 dispersed
Cmu05g2128 Cmu-Chr5:30762808 Cmu05g2130 Cmu-Chr5:30787331 1.70E-06 proximal
Cmu05g2127 Cmu-Chr5:30754177 Cmu05g2128 Cmu-Chr5:30762808 1.00E-167 tandem
Cmu05g2128 Cmu-Chr5:30762808 Cmu05g2129 Cmu-Chr5:30777488 8.00E-174 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g2128 K16296 - csv:101207623 719.924