Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g2129 ATGCCCACCGCCGTCTTCCGCGTCTCTGTTCTGTTCGTCTCTGTTTTTCAAATCATCTCCGCCGCCGGGTCGTCGCGCTGGACGGTGGAGTATCTGCCGGGATTTGCAGGCCGTCTCCCATTCGAACTGGAAACAGGATATGTGGGTGTTGGGGATTTGGAGGAAGTGCAATTGTTTTATTATTTTGTGAAATCGGAAGGAAATCCAAAGACGGATCCTCTGCTTTTTTGGCTCACCGGAGGCCCCGGTTGCTCTGCTTTAACTGCACTTGCCTTTGAAGTTGGTCCCATAAATTTTAAGATTGAGCGATACAATGGGAGCTTACCTAAAATAATCTTGAACCCTTATTCGTGGACGAAGAAATCCAGTATAATAATGGTAGATTTGCCGGTGGGAACAGGGTTTTCATATGGTAAAACTCCACAATCTCTTAAGACTGGAGATTTTAATCAAGTTCATCATTCTATTCAATTTTTTAAAAAGTGGTTGACTAATCATCCAGAATTTATATCTAATCCATTTTATGTGGGTGGAGATTCATACTCGGGTATTATCATTCCGGTTATTGCTCAAGAAATTTTGGAAGAAAATAAGTATGCTCCCTATGTAAATCTTCAGGGATACATATTGGGAAATCCAGTCACCATTCGCGACACGTATCAAAATTTTGCAATTCCTTTTGCTCATAAAATGACTCTTATCTCTGATGAGTTATTTGAGTCATTGACCTCTAGTTGCAAGGGAGAATATATAAATATTGATCCGAGCAATGTGGATTGTTTAAGACATTATAATACGTACCAAAAGTGTGTTTCAAAGATAGAAAAGTCAAGTATTTTGTTGCCAAAATGTTCGTTTCATTCTCCAAAGAAACAAAAAGATGCATTTGATCGAAGATCTCTTTACAATACCCCCAAAGTGCTTCTTGATCCCGAGCCAGCACTTCCTTCTCTTGATTGTCCTGGAAGCATTGGAGAATGGACAAGATGTAGAGATCGGCAAAATTACAACTTTGATGTTGAGAGTGCTTTTCCTTATCATGTCAACCTTAGTTCGAAAGGTTACAAGTCTTTGATTTATAGTGGGGATCATGATATGATTGTATCGCATTTGGACACTCAAGCATGGATTAAATCTTTAAATTATTCCATTGTTGAGGATTGGAGACCTTGGTTTATTGCAGATCAAGTAGCTGGATATACAAGAAGCTATGCAAATAAGATGACATTTGCCACTATAAAAGGTGGAGGGCACACGGCAGAATATACACAAAAAGAATGCAGTGTAGTATTTAGTAGATGGATAACTGGAGAACCCTTATAA 1323 39.23 MPTAVFRVSVLFVSVFQIISAAGSSRWTVEYLPGFAGRLPFELETGYVGVGDLEEVQLFYYFVKSEGNPKTDPLLFWLTGGPGCSALTALAFEVGPINFKIERYNGSLPKIILNPYSWTKKSSIIMVDLPVGTGFSYGKTPQSLKTGDFNQVHHSIQFFKKWLTNHPEFISNPFYVGGDSYSGIIIPVIAQEILEENKYAPYVNLQGYILGNPVTIRDTYQNFAIPFAHKMTLISDELFESLTSSCKGEYINIDPSNVDCLRHYNTYQKCVSKIEKSSILLPKCSFHSPKKQKDAFDRRSLYNTPKVLLDPEPALPSLDCPGSIGEWTRCRDRQNYNFDVESAFPYHVNLSSKGYKSLIYSGDHDMIVSHLDTQAWIKSLNYSIVEDWRPWFIADQVAGYTRSYANKMTFATIKGGGHTAEYTQKECSVVFSRWITGEPL 440
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 30777488 30781068 - CmPI595203_05g021290.1 Cmu05g2129 417043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g2129 440 Gene3D - 314 440 - -
Cmu05g2129 440 FunFam Serine carboxypeptidase-like 19 22 290 - -
Cmu05g2129 440 PRINTS Carboxypeptidase C serine protease (S10) family signature 408 421 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cmu05g2129 440 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 137 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cmu05g2129 440 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 187 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cmu05g2129 440 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cmu05g2129 440 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 28 434 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)|GO:0016747(PANTHER)|GO:0019748(PANTHER)
Cmu05g2129 440 Pfam Serine carboxypeptidase 33 436 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cmu05g2129 440 SUPERFAMILY alpha/beta-Hydrolases 29 438 IPR029058 -
Cmu05g2129 440 Gene3D alpha/beta hydrolase 24 295 IPR029058 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g2127 Cmu-Chr5:30754177 Cmu05g2129 Cmu-Chr5:30777488 8.50E-170 dispersed
Cmu05g2129 Cmu-Chr5:30777488 Cmu05g2714 Cmu-Chr5:35606322 6.50E-181 dispersed
Cmu05g2128 Cmu-Chr5:30762808 Cmu05g2129 Cmu-Chr5:30777488 8.00E-174 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g2129 K16296 - csv:101210918 553.903