Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu05g2129 | ATGCCCACCGCCGTCTTCCGCGTCTCTGTTCTGTTCGTCTCTGTTTTTCAAATCATCTCCGCCGCCGGGTCGTCGCGCTGGACGGTGGAGTATCTGCCGGGATTTGCAGGCCGTCTCCCATTCGAACTGGAAACAGGATATGTGGGTGTTGGGGATTTGGAGGAAGTGCAATTGTTTTATTATTTTGTGAAATCGGAAGGAAATCCAAAGACGGATCCTCTGCTTTTTTGGCTCACCGGAGGCCCCGGTTGCTCTGCTTTAACTGCACTTGCCTTTGAAGTTGGTCCCATAAATTTTAAGATTGAGCGATACAATGGGAGCTTACCTAAAATAATCTTGAACCCTTATTCGTGGACGAAGAAATCCAGTATAATAATGGTAGATTTGCCGGTGGGAACAGGGTTTTCATATGGTAAAACTCCACAATCTCTTAAGACTGGAGATTTTAATCAAGTTCATCATTCTATTCAATTTTTTAAAAAGTGGTTGACTAATCATCCAGAATTTATATCTAATCCATTTTATGTGGGTGGAGATTCATACTCGGGTATTATCATTCCGGTTATTGCTCAAGAAATTTTGGAAGAAAATAAGTATGCTCCCTATGTAAATCTTCAGGGATACATATTGGGAAATCCAGTCACCATTCGCGACACGTATCAAAATTTTGCAATTCCTTTTGCTCATAAAATGACTCTTATCTCTGATGAGTTATTTGAGTCATTGACCTCTAGTTGCAAGGGAGAATATATAAATATTGATCCGAGCAATGTGGATTGTTTAAGACATTATAATACGTACCAAAAGTGTGTTTCAAAGATAGAAAAGTCAAGTATTTTGTTGCCAAAATGTTCGTTTCATTCTCCAAAGAAACAAAAAGATGCATTTGATCGAAGATCTCTTTACAATACCCCCAAAGTGCTTCTTGATCCCGAGCCAGCACTTCCTTCTCTTGATTGTCCTGGAAGCATTGGAGAATGGACAAGATGTAGAGATCGGCAAAATTACAACTTTGATGTTGAGAGTGCTTTTCCTTATCATGTCAACCTTAGTTCGAAAGGTTACAAGTCTTTGATTTATAGTGGGGATCATGATATGATTGTATCGCATTTGGACACTCAAGCATGGATTAAATCTTTAAATTATTCCATTGTTGAGGATTGGAGACCTTGGTTTATTGCAGATCAAGTAGCTGGATATACAAGAAGCTATGCAAATAAGATGACATTTGCCACTATAAAAGGTGGAGGGCACACGGCAGAATATACACAAAAAGAATGCAGTGTAGTATTTAGTAGATGGATAACTGGAGAACCCTTATAA | 1323 | 39.23 | MPTAVFRVSVLFVSVFQIISAAGSSRWTVEYLPGFAGRLPFELETGYVGVGDLEEVQLFYYFVKSEGNPKTDPLLFWLTGGPGCSALTALAFEVGPINFKIERYNGSLPKIILNPYSWTKKSSIIMVDLPVGTGFSYGKTPQSLKTGDFNQVHHSIQFFKKWLTNHPEFISNPFYVGGDSYSGIIIPVIAQEILEENKYAPYVNLQGYILGNPVTIRDTYQNFAIPFAHKMTLISDELFESLTSSCKGEYINIDPSNVDCLRHYNTYQKCVSKIEKSSILLPKCSFHSPKKQKDAFDRRSLYNTPKVLLDPEPALPSLDCPGSIGEWTRCRDRQNYNFDVESAFPYHVNLSSKGYKSLIYSGDHDMIVSHLDTQAWIKSLNYSIVEDWRPWFIADQVAGYTRSYANKMTFATIKGGGHTAEYTQKECSVVFSRWITGEPL | 440 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 30777488 | 30781068 | - | CmPI595203_05g021290.1 | Cmu05g2129 | 417043 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu05g2129 | 440 | Gene3D | - | 314 | 440 | - | - | |
Cmu05g2129 | 440 | FunFam | Serine carboxypeptidase-like 19 | 22 | 290 | - | - | |
Cmu05g2129 | 440 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 408 | 421 | IPR001563 | GO:0004185(InterPro)|GO:0006508(InterPro) | |
Cmu05g2129 | 440 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 127 | 137 | IPR001563 | GO:0004185(InterPro)|GO:0006508(InterPro) | |
Cmu05g2129 | 440 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 162 | 187 | IPR001563 | GO:0004185(InterPro)|GO:0006508(InterPro) | |
Cmu05g2129 | 440 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 114 | 126 | IPR001563 | GO:0004185(InterPro)|GO:0006508(InterPro) | |
Cmu05g2129 | 440 | PANTHER | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE | 28 | 434 | IPR001563 | GO:0004185(InterPro)|GO:0006508(InterPro)|GO:0016747(PANTHER)|GO:0019748(PANTHER) | |
Cmu05g2129 | 440 | Pfam | Serine carboxypeptidase | 33 | 436 | IPR001563 | GO:0004185(InterPro)|GO:0006508(InterPro) | |
Cmu05g2129 | 440 | SUPERFAMILY | alpha/beta-Hydrolases | 29 | 438 | IPR029058 | - | |
Cmu05g2129 | 440 | Gene3D | alpha/beta hydrolase | 24 | 295 | IPR029058 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu05g2127 | Cmu-Chr5:30754177 | Cmu05g2129 | Cmu-Chr5:30777488 | 8.50E-170 | dispersed | |
Cmu05g2129 | Cmu-Chr5:30777488 | Cmu05g2714 | Cmu-Chr5:35606322 | 6.50E-181 | dispersed | |
Cmu05g2128 | Cmu-Chr5:30762808 | Cmu05g2129 | Cmu-Chr5:30777488 | 8.00E-174 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu05g2129 | K16296 | - | csv:101210918 | 553.903 |