Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g2184 ATGGTGGCCGGCAGAGGAATCTCTGGGTGCTCCAACATAAGGAGCATAGTCGTCCACGTCATCATCGGAAGGTGGTTCGTGGTGTTCGCTTCGCTCTTAATCATGGCGGCTGCCGGAGCAACGTACATGTTTGGCCTATATTCGAACGACATAAAATCTGTTTTGGGTTATGACCAAACAACGTTGAATTTGCTGAGTTTTTTCAAAGATTTGGGTGCAAACGTCGGTGTTTTGTCTGGACTGATTAACGAGGTTACGCCGCCATGGGTGGTTTTGTCCATCGGTGCTGTTTTGAATTTTTTTGGTTACTTCATGATTTGGCTGGCTGTTACTAAGCGGATCTCTACCCCCAAAGTTTGGCAAATGTGTCTCTATATTTGTATTGGAGCCAATTCTCAATCTTTTGCTAATACGGGTTCTCTTGTTACCTGTGTCAAAAACTTTCCTGAAAGTCGTGGCGTAGTTCTCGGTATCTTGAAGGGATACGTCGGACTGAGCGGCGCCATAATCACACAACTCTTCCATGCATTTTACGGCAACGACACCAAATCCTTAATTCTCCTCATCGGATGGCTCCCGGCGGCAATTTCCTTCGCATTTTTACGAACAATTCGTATTATGAAAGTTATCCGACAGCCAAACGAGCTTAAAGTCTTCTACAATTTCCTTTACATTTCTCTTGGCCTCGCCGGATTCCTAATGCTAATGATCATCGTAGAGAGCAAAACAGAGTTCACTCAAAGCGAATACGGTGGCAGCGCCGCTGTCGTCCTTCTCCTCCTCTTCCTCCCACTCGCCGCCGTCATCATTGAAGAATACAATCTCTGGAAACTCAAAACCGTCCTCATTAAATCCCCAAATCCCTCTGTTCAAATCGTAACAGAGAAACTCCCAAAAACCGAGCAACTCCATAAGACAGAGCATCCAAAACAACAACCAAAAGAACCATCTTGTTGGACAACAATTTTCAACCCACCAGCGCGCGGCGAGGATTTCACAATTCTCCAAGCTCTCTTCAGTGTCGACATGCTGATTCTATTCCTCTCTGCAATTTGCGGCGTCGGCGGAACATTAACGGCAATAGACAATTTGGGTCAAATCGGAATGTCTTTGGGGTACCCAAAAAGAAGCATTAGCACATTTGTAACATTAGTCAGCATTTGGAATTACCTCGGCCGAGTTGCCTCTGGTTTCATCTCAGAAATAGTTTTGACAAAATACAAATTCCCTCGTCCTCTAATGCTCTCTCTGACCCTTCTTTTTTCCTGCATTGGCCATTTGATGATCGCATTTGATGTCCCAAATGGGCTTTATGTGGCTTCCATCGTAATTGGATTCTGCTTTGGAGCACAGTGGCCATTGATTTTCGCCATAATTTCAGAGCTTTTTGGGTTGAAATATTACTCCACACTATACAATTTTGGGGCAGTGGCAAGCCCAGTTGGGCTTTATGTTCTGAATGTGAAAGTGGCTGGGAATTTCTACGACAGAGAAGCAGAGAAGCAACTGAGAGCAAAAGGGATGATCAGAAAAGCAGGGGAAGAATTAAAGTGCTTTGGAGGGGAATGCTTCAAGCTTTCGTTCATTGTAATTACTGCAGTTACTTTGTTGGGTATGTTTGTTTCGTTGATTTTAGTGATTAGAACGAGGAGTTTTTACAAGAGTGATATTTATCAGAAGTTCCGAGATGAAGCTAAAACAGAGGTGGCCGGAAATGGATGTTTGGCGGCGGCCACAGCAACAGAAGAGACAAGAAAATGA 1761 44.35 MVAGRGISGCSNIRSIVVHVIIGRWFVVFASLLIMAAAGATYMFGLYSNDIKSVLGYDQTTLNLLSFFKDLGANVGVLSGLINEVTPPWVVLSIGAVLNFFGYFMIWLAVTKRISTPKVWQMCLYICIGANSQSFANTGSLVTCVKNFPESRGVVLGILKGYVGLSGAIITQLFHAFYGNDTKSLILLIGWLPAAISFAFLRTIRIMKVIRQPNELKVFYNFLYISLGLAGFLMLMIIVESKTEFTQSEYGGSAAVVLLLLFLPLAAVIIEEYNLWKLKTVLIKSPNPSVQIVTEKLPKTEQLHKTEHPKQQPKEPSCWTTIFNPPARGEDFTILQALFSVDMLILFLSAICGVGGTLTAIDNLGQIGMSLGYPKRSISTFVTLVSIWNYLGRVASGFISEIVLTKYKFPRPLMLSLTLLFSCIGHLMIAFDVPNGLYVASIVIGFCFGAQWPLIFAIISELFGLKYYSTLYNFGAVASPVGLYVLNVKVAGNFYDREAEKQLRAKGMIRKAGEELKCFGGECFKLSFIVITAVTLLGMFVSLILVIRTRSFYKSDIYQKFRDEAKTEVAGNGCLAAATATEETRK 586
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 31288056 31290287 + CmPI595203_05g021840.1 Cmu05g2184 417098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g2184 586 Pfam Major Facilitator Superfamily 310 478 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Cmu05g2184 586 CDD MFS_Mch1p_like 23 539 - -
Cmu05g2184 586 FunFam Nodulin family protein 334 555 - -
Cmu05g2184 586 Gene3D MFS general substrate transporter like domains 332 554 IPR036259 -
Cmu05g2184 586 SUPERFAMILY MFS general substrate transporter 23 551 IPR036259 -
Cmu05g2184 586 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 24 561 - GO:0016020(PANTHER)
Cmu05g2184 586 Pfam Nodulin-like 24 268 IPR010658 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g0870 Cmu-Chr3:3217614 Cmu05g2184 Cmu-Chr5:31288056 4.20E-52 dispersed
Cmu03g0879 Cmu-Chr3:3260375 Cmu05g2184 Cmu-Chr5:31288056 2.20E-141 dispersed
Cmu03g0880 Cmu-Chr3:3268369 Cmu05g2184 Cmu-Chr5:31288056 4.40E-193 dispersed
Cmu05g2184 Cmu-Chr5:31288056 Cmu05g2186 Cmu-Chr5:31309409 1.40E-207 dispersed
Cmu05g2184 Cmu-Chr5:31288056 Cmu05g2185 Cmu-Chr5:31299360 1.30E-192 tandem
Cmu10g2720 Cmu-Chr10:33885032 Cmu05g2184 Cmu-Chr5:31288056 1.30E-144 wgd
Cmu05g2184 Cmu-Chr5:31288056 Cmu08g0725 Cmu-Chr8:19602125 5.20E-186 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g2184 - - - 0.0