Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g2186 ATGGAGGGATTGGGCATGAAATCCTTTACACTAAAACTAATCAAAGGGTCATGGTTCATGATGTTTGGGTCGTTCCTAATCATGTCGATGGCAGGCATCCCCTACATGTTCGGCTTGTATTCCAGCACCATAAAATCCGTCTTAGGGTACGACCAAACAACCCTAAACTTCATAAGTTTCTTCAAAGACGTCGGTACAACGGTCGGCGTCGTAGCTGGGTTAATCAACGAAGTAACCCCGCCATGGTCCATCCTAGCCATGGGAGCTCTCCTCAACTTCTTCGGCTACTTCATGATCTGGTTATCCGTCTCCCAGAAAATCCCCACTCACGTCTGGTTAATGTGTCTCTACATCTGTGTCGGCGCCAACGCAACGACGTTCGCCAACACGGGCGCGTTAGTTACGTGCGTAAAGAACTACCCGCAACGGCGTGGCGTCGTGATCGGGATTTTGAAAGGGTATATGGGATTGAGTGGGGCAATTGTGACGCAATTGTATCATGCTATATATGGGAAAGATGAGAAGTCGTTGATATTGTTGTTGGGGTGGTTGCCTGCGGTGGTGTCGTTCGTGTTTTTGCCGACGGTACGGCGGATGAAGGTGGAGCATGAGGAGGATGAGTTGAAGGTTTTTTATAGGTTTTTGTATATATCGTTGGGATTGGCAGGGTTTTTGATGATGATGATAATTTTGCAACAAAAGTTTAGTTTTGATAGAGGGGAATATGGAGGGAGTGCGGCGGTGGTTACTATTTTGTTGCTTTTTCCTATCGTCGTGGTTGTTGCTCAAGAGTTTAAGGCGTGGCGGCGGTTGAATAAGCCGGCGGTTCTTGAAAATGGCCTTTCTCCCTTGCCGATGTCACCACCATTGAAGAACACAACACCAATGTCACTCCTCCCGAAGAAACCAAAACCCCAACAACAACCCATCAAAGTCGAGTGGTGGAAAAACGTATTTAATCCCCCACCAAGAGGAGACGATTGGACAATCCTCCAAGCTTTGTTCAGCTTCGACATGTTCCTCCTCTTCCTTGCCACCGCCTGCGGCGTCGGCGGCACCCTCACCGCCATCGACAACCTCGGCCAAATCGGTCAATCCCAAGATTACCCCAAAAAAAGCATCAGCACATTCGTTTCCCTCGTCAGCATCTGGAATTACCTCGGCCGAGTCATGGCCGGATTCCTCTCCGAACATTTACTCATCAAATACAAATTCCCCCGTCCTTTAATGCTTACGATCGTTCTCCTTCTTTCCTGCATTGCCCATCTTCTAATCGCCTTCAATCCCGCCGGCGGCCTTTACATCGCCTCTGTTTTGACCGGATTCTGTTACGGCGCTCAATGGCCTCTGCTTTTCGCCATTGTTTCAGAGATTTTTGGGCTGAAATATTACGCGACTTTGTATAATTTCGGGTCGGTAGCTAGCCCAGTAGGGCTTTATGTGTTGAATGTGAATGTGGCTGGGTATTTGTATGATAAGGAAGCGAAGAAGCAGCTGGCGGTGGCGGGGAGGATTAGGAAAACAGGGGAGGAGTTGATTTGTAATGGGACGGTGTGTTTTAAGCTTTCTTTTGTGATTATTACGGCGGTGAGTTTGTTTGGGGCTTTGGTTTCCTTGGTTTTAGTGTTGAGGACCAAGAAGTTTTATAAGAGTGATATTTATAGGAAGTTTAGAGAGGCAGAGGAGGCCGCCGCCGCGGCGGAGAAAGAGGAGGAGGATGGTGGTGATGGAGTTAGGAACGGCGGCGGTTTGGTGGAGGAGTCGAAACAGGGGCTTAGGCAATGA 1785 48.63 MEGLGMKSFTLKLIKGSWFMMFGSFLIMSMAGIPYMFGLYSSTIKSVLGYDQTTLNFISFFKDVGTTVGVVAGLINEVTPPWSILAMGALLNFFGYFMIWLSVSQKIPTHVWLMCLYICVGANATTFANTGALVTCVKNYPQRRGVVIGILKGYMGLSGAIVTQLYHAIYGKDEKSLILLLGWLPAVVSFVFLPTVRRMKVEHEEDELKVFYRFLYISLGLAGFLMMMIILQQKFSFDRGEYGGSAAVVTILLLFPIVVVVAQEFKAWRRLNKPAVLENGLSPLPMSPPLKNTTPMSLLPKKPKPQQQPIKVEWWKNVFNPPPRGDDWTILQALFSFDMFLLFLATACGVGGTLTAIDNLGQIGQSQDYPKKSISTFVSLVSIWNYLGRVMAGFLSEHLLIKYKFPRPLMLTIVLLLSCIAHLLIAFNPAGGLYIASVLTGFCYGAQWPLLFAIVSEIFGLKYYATLYNFGSVASPVGLYVLNVNVAGYLYDKEAKKQLAVAGRIRKTGEELICNGTVCFKLSFVIITAVSLFGALVSLVLVLRTKKFYKSDIYRKFREAEEAAAAAEKEEEDGGDGVRNGGGLVEESKQGLRQ 594
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 31309409 31311344 + CmPI595203_05g021860.1 Cmu05g2186 417100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g2186 594 SUPERFAMILY MFS general substrate transporter 12 203 IPR036259 -
Cmu05g2186 594 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 17 558 - GO:0016020(PANTHER)
Cmu05g2186 594 Pfam Nodulin-like 18 261 IPR010658 -
Cmu05g2186 594 CDD MFS_Mch1p_like 18 535 - -
Cmu05g2186 594 Gene3D MFS general substrate transporter like domains 328 550 IPR036259 -
Cmu05g2186 594 SUPERFAMILY MFS general substrate transporter 247 549 IPR036259 -
Cmu05g2186 594 Pfam Major Facilitator Superfamily 341 547 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Cmu05g2186 594 Coils Coil 550 570 - -
Cmu05g2186 594 MobiDBLite consensus disorder prediction 566 594 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g2184 Cmu-Chr5:31288056 Cmu05g2186 Cmu-Chr5:31309409 1.40E-207 dispersed
Cmu05g2186 Cmu-Chr5:31309409 Cmu08g0725 Cmu-Chr8:19602125 9.00E-186 dispersed
Cmu05g2185 Cmu-Chr5:31299360 Cmu05g2186 Cmu-Chr5:31309409 1.90E-118 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g2186 - - - 0.0