Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g2240 ATGTCTTCTCTAATTTCAAGGCTTTTATTTCTCAATTTCTGCTTCTCTATACTCTTTTTCAGCTCAAATTCACAAGATAATGACTCTCAAAAGACATATATTGTTTATATGGGAAGTCATCCAAAAGGGAAGGTTTCAACTTCATCTCACCATATAAGATTGCTAAAAGAAACCATTGGCAGTACTTTTCCTCCACATTCTTTACTCCATAGCTACAAGAGAAGCTTCAATGGATTTGTGGCGAAGCTGACTGAAGCTGAAGCAAAAAAGGTTTCAGAAATGGAAGGGGTAATATCAGTTTTCCCAAATGGGAAAAAACAACTCCACACAACAAGATCTTGGGACTTCATGGGTTTCTCCGAACAAGTGAAGAGAGTTCCGGCGGTGGAAAGCAACGTCATTGTCGGAGTATTCGACAGCGGAATTTGGCCGGAATCTCCTAGTTTTCACCACACAGGATACGGTCCGCCGCCACCCAAGTGGAAGGGCAGTTGTGAAGTCTCCGCCAATTTCTCTTGCAACAATAAAATCATCGGAGCTCGTTCATATCGTAGTGACGGTAAACATCCAGAAGGTGACATCAAAGGTCCAAGAGATTCGGATGGCCACGGGACTCACACAGCATCAATTGTAGCTGGAGGGTTGGTTCGACAAGCGAGCATGTTGGGACTCGCCCTTGGCACAATAAGGGGTGGAGTCCCATCAGCACGCATTGCCGCATACAAAGTATGTTGGTCTGATGGCTGCACCGACGCTGACATTCTCGCCGCATTTGATGATGCCATTGCTGACGGTGTCGATATCATCTCCGGTTCTCTTGGAGGATCAAGGGTCAAAGATTACTTCAACGACTCCATAGCCATTGGATCCTTCCATGCAATGAAGAAGGGAATTCTTTCGTCATTGGCCGTTGGAAATAACGGCCCCGATTTTACAAGCATTGTGAACTTCTCTCCGTGGTCGTTGTCGGTGGCGGCTACCACCACTGATCGAAAATTCGAAACTAAAATTAAGCTTGGAGATGGAAGAGAATTCAATGGAGTCAGCATCAATACATTTGATATAAATGGAAAACAAATTCCATTGGTTTACGCCGGAGATATTCCTAAAGCTCCCTTTGACAGCTCCGTGTCAAGGATGTGCTTTGAGAATACAGTAGACTTGGAGTTGGTAAAGGGTAAAATTGTAGTATGCGATTCATTAGCCGTTCCAGAAGGAGTTGTGGCCGTAAAAGGTGCGGTGGGTATTATAATGCAAGACGATTCTTCACAAGATGATACCAACTCTTTTCCATTGCCTGCTTCTCATCTTGGCCCAAAGCCTGGTGCTCTCATTCTCTCTTATATCAACTCAACCAACAGCCTTCCAACAGCAACTATAATGAAGAGCACAGAAAGGAAACGTAAAAGAGCTCCTTTTGTTGCATCTTTTTCTTCAAGAGGTCCAAACCCAATAACCCCCAACATTCTCAAGCCGGATTTATGTGGTCCAGGAGTGGAAATTCTTGCAGCTTGGCCTGCAACGGCTTCACCTTCGGGAGCTGAAGAAGATAGTAGAAGAGTTGTTTATAACATCCTTTCCGGAACTTCAATGGCTTGCCCACATGTCACTGCAGCAGCTGCTTATGTTAAGTCCTTTCATCCTACTTGGTCTCCTGCTGCCCTTAAATCTGCCCTTATCACTACAGCATTTCCAATGAGCCTTAAACGTAATCCAGACAGAGAGTTTGGACATGGTGCCGGACACATAAATCCACTAGGCGCAGTGCATCCTGGATTAATCTACAATGCTTCTGAGATTGACTATGTAAAGTTTTTGTGCGGCCAAGGTTATACCACCGAGTTGCTCCAACGAGTCTCGGAAGACAACAACACTTGTCTTTCGAACAATTCCGACACAGTATTCGACCTTAACTATCCTTCCTTTGCTCTTTCCACAAATATCTCGAAACCAATTAACCAAGTTTACAAAAGGAGTGTCACCAATGTTGGATCAAAAAATGCAACATATAAAGCCACCATAATTAATCCATGGAATAATCTTGAGATCAAAGTAAAGCCTTTTATTCTTTCATTCAAGAATTTGGGAGAGGAGCAAAGCTTTGAGCTTACAATTAAAGGAAGAATTAGTAAAAATATTCAATCAGCTTCTTTGGTATGGGATGATGGGAAACACAAAGTGAGGAGTCCAATAACAGTATTTGATGCTAATATTCACTCTTCTTAA 2226 43.04 MSSLISRLLFLNFCFSILFFSSNSQDNDSQKTYIVYMGSHPKGKVSTSSHHIRLLKETIGSTFPPHSLLHSYKRSFNGFVAKLTEAEAKKVSEMEGVISVFPNGKKQLHTTRSWDFMGFSEQVKRVPAVESNVIVGVFDSGIWPESPSFHHTGYGPPPPKWKGSCEVSANFSCNNKIIGARSYRSDGKHPEGDIKGPRDSDGHGTHTASIVAGGLVRQASMLGLALGTIRGGVPSARIAAYKVCWSDGCTDADILAAFDDAIADGVDIISGSLGGSRVKDYFNDSIAIGSFHAMKKGILSSLAVGNNGPDFTSIVNFSPWSLSVAATTTDRKFETKIKLGDGREFNGVSINTFDINGKQIPLVYAGDIPKAPFDSSVSRMCFENTVDLELVKGKIVVCDSLAVPEGVVAVKGAVGIIMQDDSSQDDTNSFPLPASHLGPKPGALILSYINSTNSLPTATIMKSTERKRKRAPFVASFSSRGPNPITPNILKPDLCGPGVEILAAWPATASPSGAEEDSRRVVYNILSGTSMACPHVTAAAAYVKSFHPTWSPAALKSALITTAFPMSLKRNPDREFGHGAGHINPLGAVHPGLIYNASEIDYVKFLCGQGYTTELLQRVSEDNNTCLSNNSDTVFDLNYPSFALSTNISKPINQVYKRSVTNVGSKNATYKATIINPWNNLEIKVKPFILSFKNLGEEQSFELTIKGRISKNIQSASLVWDDGKHKVRSPITVFDANIHSS 741
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 31845828 31852580 + CmPI595203_05g022400.1 Cmu05g2240 417154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g2240 741 MobiDBLite consensus disorder prediction 182 202 - -
Cmu05g2240 741 Gene3D - 606 735 - -
Cmu05g2240 741 MobiDBLite consensus disorder prediction 182 207 - -
Cmu05g2240 741 Pfam Peptidase inhibitor I9 32 109 IPR010259 -
Cmu05g2240 741 SUPERFAMILY Subtilisin-like 108 593 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cmu05g2240 741 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 731 IPR045051 -
Cmu05g2240 741 CDD PA_subtilisin_like 337 460 - -
Cmu05g2240 741 ProSitePatterns Serine proteases, subtilase family, serine active site. 528 538 IPR023828 -
Cmu05g2240 741 Pfam Fibronectin type-III domain 636 733 IPR041469 -
Cmu05g2240 741 Pfam Subtilase family 131 579 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cmu05g2240 741 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 109 IPR037045 -
Cmu05g2240 741 ProSiteProfiles Serine proteases, subtilase domain profile. 113 589 - -
Cmu05g2240 741 CDD Peptidases_S8_3 106 563 IPR034197 -
Cmu05g2240 741 FunFam Subtilisin-like protease SBT5.3 21 109 - -
Cmu05g2240 741 Gene3D - 330 467 - -
Cmu05g2240 741 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
Cmu05g2240 741 PRINTS Subtilisin serine protease family (S8) signature 527 543 IPR015500 -
Cmu05g2240 741 PRINTS Subtilisin serine protease family (S8) signature 199 212 IPR015500 -
Cmu05g2240 741 FunFam Subtilisin-like protease SBT1.5 132 351 - -
Cmu05g2240 741 Gene3D Peptidase S8/S53 domain 132 602 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g0099 Cmu-Chr1:851319 Cmu05g2240 Cmu-Chr5:31845828 2.10E-300 dispersed
Cmu05g2240 Cmu-Chr5:31845828 Cmu07g0410 Cmu-Chr7:4279865 3.30E-270 dispersed
Cmu05g2240 Cmu-Chr5:31845828 Cmu04g1030 Cmu-Chr4:24874720 1.70E-165 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g2240 - - - 0.0