Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu05g2244 | ATGGGGGTGCCTGCAACTGCAACTTTGGGGGATGATTTTCTGAGAGAAAGAGCGGCTAAGATGAGAGAATCACTGCAAAAGAGCCAAACTATTACTGATAACGTTGTCACCATTCTCGGTTCCTTTGACCACCGTCTTTCAGCTCTCGAAACCGCCATGCGCCCTACTCAGATCAGAACCAATTCTATTCGTAAAGCTCACGAGAACATTGATAAGACTTTGAAGGCTGCGGAGGTTATTTTAGCACAATTTGATCTCTCTCGTCAGGCAGAAACGAAAATACTTAGAGGGCCACATGAGGATTTGGAAAGTTATCTCGGGGCTATTGGTCAGTTAAGAAACATTATCAAATTCTTTAGTAGCCATAAAGGTTTTAAGAGTAGCGAGGTAGTGCTTAACCAGGCAAATACGCTGCTTGCAAAAGCCATCTCAAAGCTGGAAGATGAGTTCAGACAGCTATTATCTTCCTACAGCAAACCTGTGGAGCCCGAGCGTCTTTTCGATTGCCTGCCAAAATCGTTGCAACCATCTTCAGAATCTCCTGGTCATGATTCAGGTGGAAAGAATCACTCCTCAAATCCACATTCTGCACATCATGATAATAGCTTAGAGACTGCTGTCTACACACCTCCCTCTCTCATACCACCACGTGTTCTACCACTGCTGCATGATTTATCACAGCAAATGGTTCAAGCTGGTCATCAACAACAAATTTTAAAAATCTACAGGGATACCCGTTCAGTCGTTCTGGAAGAAAGCCTACGGAAATTAGGAGTTGAAAAACTTAGCAAAGATGATGTCCAGAAGATGGCATGGGAGGTTTTAGAGGCAAAAATTGGGAACTGGATTCATTTTATGCGTATTGCAGTTAAACTGCTATTTGCTGGTGAACGAAAAGTTTGCGATCAAATATTTGAAGGCTTTGAATCGCTTAGAGACCAATCATTTGCAGAGGTTACAAGTAGTAGTGTGTCTGTGCTATTCAGTTTCGGGGAGGCGATTGCAAAAAGCAAGAGGTCACCAGAAAAGTTGTTTGTACTTTTGGACATGTATGAAATTATGCGAGAGCTTCACTCCGAGATAGAGACAATTTTTAAGGGTAAAGCATGCAATGAGATCAAGGAATCTGCATCGGGTTTGACCAAACGGCTTGCTCAGACAGCTAAGGATACATTTGGTGATTTTGAGGAAGCTGTTGAAAAAGATGCCACAAAAACTGCGGTGTTGGATGGAACTGTTCATCCTTTAACAAGCTATGTGATTAATTATGTCAAATTTCTTTTTGACTATCAAGCAACCTTGAAGCAACTTTTTCAAGAATTTGAAGATAGTGGTCAAACGAATTCGGAATTGGCCACCGTCACAATGCAAATAATGCAGGCTCTTCAATCTAATTTGGATGGAAAATCTAAGCATTACAGAGACCCTGCTTTGACTCACTTATTCCTCATGAACAACATTCACTATATAGTTAGATCTGTTCGCAGATCTGAAGCCAAGGATTTGCTAGGGGACGATTGGGTTCAGAGACATAGGAGGGTCGTACAACAACATGCAAATCAGTATAAAAGGAATGCTTGGTCAAAGATTCTGCAATGTCTCTCTGTTCAAGGGTTAACTTCATCTGGCGGTGGCAGTGTACCTGGTATAGATGGAGGAAATAGTAGCGGAGTTTCTAAGGCGCTTATTAAAGACAGGTTCAAGACTTTCAACATGCAGTTTGAGGAACTGCATCAAAGACAATCTCAATGGGCAGTTCCCGATACTGAGTTGCGGGAGTCTCTAAGACTTTCAGTTGCTGAAGTCTTACTTCCTGCATACAGATCCTTCCTAAAACGTTTTGGGCCACTGATTGATGGTGGAAAGAATCCCCAAAAGTATGTCAGATACCAGCCAGAGGATCTCGAAAGGATGCTCGGAGAATTTTTCGAAGGGAAGAACTTGAGTGAACCTAAGCGGCTCACGCTCGATGTCCTTGAAGAGGAATCCTGTCTTGCGAATCAAAGTAAAATTCTGACTTGA | 2022 | 42.33 | MGVPATATLGDDFLRERAAKMRESLQKSQTITDNVVTILGSFDHRLSALETAMRPTQIRTNSIRKAHENIDKTLKAAEVILAQFDLSRQAETKILRGPHEDLESYLGAIGQLRNIIKFFSSHKGFKSSEVVLNQANTLLAKAISKLEDEFRQLLSSYSKPVEPERLFDCLPKSLQPSSESPGHDSGGKNHSSNPHSAHHDNSLETAVYTPPSLIPPRVLPLLHDLSQQMVQAGHQQQILKIYRDTRSVVLEESLRKLGVEKLSKDDVQKMAWEVLEAKIGNWIHFMRIAVKLLFAGERKVCDQIFEGFESLRDQSFAEVTSSSVSVLFSFGEAIAKSKRSPEKLFVLLDMYEIMRELHSEIETIFKGKACNEIKESASGLTKRLAQTAKDTFGDFEEAVEKDATKTAVLDGTVHPLTSYVINYVKFLFDYQATLKQLFQEFEDSGQTNSELATVTMQIMQALQSNLDGKSKHYRDPALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRVVQQHANQYKRNAWSKILQCLSVQGLTSSGGGSVPGIDGGNSSGVSKALIKDRFKTFNMQFEELHQRQSQWAVPDTELRESLRLSVAEVLLPAYRSFLKRFGPLIDGGKNPQKYVRYQPEDLERMLGEFFEGKNLSEPKRLTLDVLEEESCLANQSKILT | 673 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 31873756 | 31881818 | - | CmPI595203_05g022440.1 | Cmu05g2244 | 417158 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu05g2244 | 673 | MobiDBLite | consensus disorder prediction | 173 | 201 | - | - | |
Cmu05g2244 | 673 | FunFam | Exocyst subunit Exo70 family protein | 88 | 651 | - | - | |
Cmu05g2244 | 673 | Pfam | Exo70 exocyst complex subunit C-terminal | 281 | 640 | IPR046364 | GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro) | |
Cmu05g2244 | 673 | Pfam | Exocyst complex component Exo70 N-terminal | 73 | 155 | - | - | |
Cmu05g2244 | 673 | MobiDBLite | consensus disorder prediction | 171 | 201 | - | - | |
Cmu05g2244 | 673 | Gene3D | Exocyst complex component Exo70 | 78 | 653 | - | - | |
Cmu05g2244 | 673 | SUPERFAMILY | Cullin repeat-like | 80 | 644 | IPR016159 | - | |
Cmu05g2244 | 673 | PANTHER | EXOCYST COMPLEX PROTEIN EXO70 | 17 | 646 | IPR004140 | GO:0000145(InterPro)|GO:0000145(PANTHER)|GO:0006887(InterPro)|GO:0006887(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu01g1457 | Cmu-Chr1:28120162 | Cmu05g2244 | Cmu-Chr5:31873756 | 2.60E-276 | dispersed | |
Cmu04g0890 | Cmu-Chr4:23430537 | Cmu05g2244 | Cmu-Chr5:31873756 | 2.10E-46 | dispersed | |
Cmu05g2244 | Cmu-Chr5:31873756 | Cmu07g1430 | Cmu-Chr7:29479002 | 1.50E-104 | dispersed | |
Cmu05g2244 | Cmu-Chr5:31873756 | Cmu02g2057 | Cmu-Chr2:34226190 | 5.40E-78 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu05g2244 | K07195 | - | csv:101206262 | 1219.53 |