Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g2303 ATGGCAAAATTTCCTTCAATTTCCCTGTTTTTTCTCCTCTGCAACTTATGCCTTTCCAGGGCTTCTTTGAATGAAGAGGGCAATGCCCTTTTATCATTCAAACAATCCATTACTGAAGACCCAGAGGGGTGTTTCAGCAACTGGAATTCTTCCGATGAAACCCCATGTGGTTGGAATGGAGTTACATGCAAGGATCTAAGAGTTGTTTCTCTTAGTATTCCTAAGAAGAAACTTAATGGGGTTATTCCTTCTTCTCTGGGGTTTCTGTCTGAGCTTCGTCATGTGAATCTCAGGAGTAATAAGCTCCATGGAACCTTGCCAATGGAGCTTTTTCAAGCTAATGGAATTCAAAGTTTGGTGCTTTATGGAAATTCCTTCACTGGGTCTCTTCCAAATGAGATTGGTAAGCTAAAAAACCTTCAAATCTTGGATTTGTCTCGGAATTTCTTTAATGGGTCCTTGCCTGTTTCCTTAATGCAATGCACAAGGTTGAGAGTTCTTGATCTTGGTCAGAACAATTTTTCCAATTCTCTGCCTACTGGGTTTGGTTCCAGTTTGAATTTCTTGGAAACATTGGATCTTTCTTACAATAAGTTTAATGGTTCAATTCCAATGGATATCGGTAATTTGTCTAGCTTACAAGGCACTGTTGATTTCTCACATAATTTGTTTTCTGGCTCTATCCCAGCCAGCCTGGGAAACCTTCCTGAAAAAGTTTATATTGATCTTACTTATAATAATTTGAGTGGTTCAATACCCCAGAATGGTGCTCTTATGAACAGAGGGCCAACTGCTTTTATTGGGAATCCTGGCCTTTGTGGGCCGCCGTTGAAGAACCCATGTTCTTCTGAAACTCCGGGCGCAAGTTCCCCGTCCTCGTTCCCATTTTTCCCAGACAATTATCCACCTGGGAGTTCTGAGGGTAATGGTAATAAGTATGACAAAGGAGGGCTGAGTAAGAGCACTTTGGTTGCAATAATCATCGGTGACATTGTCGGTATTTGCCTGATCGGGTTGCTGTTTTCATATTGCTATTCGAGGTTTTGCACTCATAGAAATGGGAAGAAGGCAGACCAATCTAATTATGGATTTGAGAAGGGTGGAAAAGGAAGAAAAGATTGTCTCTGCTTTCAAAAGGGTGAATCCGAGAACGTTTCGGAGCATATCGAGCAGTTTGATTTGGTACCTCTGGATTCACAAGTGACGTTTGATCTCGATGAACTTCTCAAGGCATCGGCATTTGTTTTGGGAAAAAGTGGTATCGGAATCGTGTATAAAGTTGTGCTTGAAGATGGACTCACTTTAGCTGTGAGAAGATTGGGTGAAGGAGGTTCTCAAAGATTAAAAGAATTTCAAACTGAAGTTGAAGCAATTGGGAAGTTGAGGCATCCGAATGTAGTTAGCCTTAGAGCATATTATTGGTCTGTTGATGAGAAACTGCTTATTTATGATTACATACCAAATGGGAACCTTGCATCTGCTATTCATGGAAAGCCCGGAACAACATCGTTTACACCGTTAGCGTGGTCTGTTCGGTTTAAAATCATGAAAGGCATTGCGAAAGGGTTGGTTTACTTGCACGAGTTTAGCCCGAAAAAGTATGTTCATGGTAATTTGAAAACAAACAACATACTTCTTGGACACGACATGACACCGCATATTTCTAATTTTGGGCTTGCCCGCCTTGTTAACATTGCTGGAGGATCGCCAACTGTGCGATCAAGTCATATAGCAGAGGAAAAACCACAAGAGAAACAACTAAAGTCTGCCACCTCTGAAGCTAGTACATTCAGTTCTAGCATGAGTACTTACTACCAAGCACCAGAAGCGTTCAAAGTCGTGAAGCCATCACAGAAATGGGACGTTTACTCGTATGGTGTGATATTACTTGAAATGATCACCGGAAGGTTGCCTATAGTTCAGGTGGGAGCGTCGGAAATGGATCTTGTTCAATGGATTCAACTCTGCATTGAGGAAAAGAAGCCGCTTTCAGATGTAATAGACCCATCTTTGGCTCCGGACGACGATGCAGACGAGGAGATTATTGCAGTTTTGAAGATAGCATTAGCTTGTGTTCAAAATAGTCCAGAAAGAAGACCTGCAATGAGACATGTTTGTGATGGATTGAGCAGGTTGGGTGTCACTCCAAACTGA 2154 41.74 MAKFPSISLFFLLCNLCLSRASLNEEGNALLSFKQSITEDPEGCFSNWNSSDETPCGWNGVTCKDLRVVSLSIPKKKLNGVIPSSLGFLSELRHVNLRSNKLHGTLPMELFQANGIQSLVLYGNSFTGSLPNEIGKLKNLQILDLSRNFFNGSLPVSLMQCTRLRVLDLGQNNFSNSLPTGFGSSLNFLETLDLSYNKFNGSIPMDIGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGSIPQNGALMNRGPTAFIGNPGLCGPPLKNPCSSETPGASSPSSFPFFPDNYPPGSSEGNGNKYDKGGLSKSTLVAIIIGDIVGICLIGLLFSYCYSRFCTHRNGKKADQSNYGFEKGGKGRKDCLCFQKGESENVSEHIEQFDLVPLDSQVTFDLDELLKASAFVLGKSGIGIVYKVVLEDGLTLAVRRLGEGGSQRLKEFQTEVEAIGKLRHPNVVSLRAYYWSVDEKLLIYDYIPNGNLASAIHGKPGTTSFTPLAWSVRFKIMKGIAKGLVYLHEFSPKKYVHGNLKTNNILLGHDMTPHISNFGLARLVNIAGGSPTVRSSHIAEEKPQEKQLKSATSEASTFSSSMSTYYQAPEAFKVVKPSQKWDVYSYGVILLEMITGRLPIVQVGASEMDLVQWIQLCIEEKKPLSDVIDPSLAPDDDADEEIIAVLKIALACVQNSPERRPAMRHVCDGLSRLGVTPN 717
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 32342006 32344236 - CmPI595203_05g023030.1 Cmu05g2303 417217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g2303 717 SUPERFAMILY L domain-like 25 278 - -
Cmu05g2303 717 PANTHER OS05G0588300 PROTEIN 161 712 IPR050994 -
Cmu05g2303 717 FunFam Leucine-rich repeat protein kinase family protein 486 715 - -
Cmu05g2303 717 Gene3D Phosphorylase Kinase; domain 1 378 485 - -
Cmu05g2303 717 MobiDBLite consensus disorder prediction 278 313 - -
Cmu05g2303 717 FunFam Leucine-rich repeat receptor-like protein kinase 188 283 - -
Cmu05g2303 717 Pfam Leucine rich repeat N-terminal domain 23 63 IPR013210 -
Cmu05g2303 717 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 23 184 - -
Cmu05g2303 717 ProSiteProfiles Protein kinase domain profile. 410 712 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu05g2303 717 CDD STKc_IRAK 416 712 - -
Cmu05g2303 717 Pfam Protein kinase domain 416 706 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu05g2303 717 Pfam Leucine Rich Repeat 116 137 IPR001611 GO:0005515(InterPro)
Cmu05g2303 717 Pfam Leucine Rich Repeat 189 210 IPR001611 GO:0005515(InterPro)
Cmu05g2303 717 Pfam Leucine Rich Repeat 139 161 IPR001611 GO:0005515(InterPro)
Cmu05g2303 717 Pfam Leucine Rich Repeat 217 235 IPR001611 GO:0005515(InterPro)
Cmu05g2303 717 Pfam Leucine Rich Repeat 163 184 IPR001611 GO:0005515(InterPro)
Cmu05g2303 717 Gene3D Transferase(Phosphotransferase) domain 1 486 715 - -
Cmu05g2303 717 Gene3D Ribonuclease Inhibitor 180 282 IPR032675 -
Cmu05g2303 717 Gene3D Ribonuclease Inhibitor 22 179 IPR032675 -
Cmu05g2303 717 SUPERFAMILY Protein kinase-like (PK-like) 415 707 IPR011009 -
Cmu05g2303 717 FunFam Leucine-rich repeat receptor-like protein kinase 393 485 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g2303 Cmu-Chr5:32342006 Cmu10g2669 Cmu-Chr10:33492269 1.20E-62 dispersed
Cmu02g0821 Cmu-Chr2:9583104 Cmu05g2303 Cmu-Chr5:32342006 1.50E-76 transposed
Cmu04g0129 Cmu-Chr4:2153647 Cmu05g2303 Cmu-Chr5:32342006 9.70E-77 transposed
Cmu05g1133 Cmu-Chr5:10779808 Cmu05g2303 Cmu-Chr5:32342006 7.30E-71 transposed
Cmu11g0943 Cmu-Chr11:12979643 Cmu05g2303 Cmu-Chr5:32342006 1.50E-134 transposed
Cmu11g1388 Cmu-Chr11:26049690 Cmu05g2303 Cmu-Chr5:32342006 6.60E-112 transposed
Cmu01g0569 Cmu-Chr1:6121564 Cmu05g2303 Cmu-Chr5:32342006 1.20E-213 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75563 PF00069 Pkinase 2.30E-29 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g2303 - - - 0.0