Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g2373 ATGCGATCGCCTCAGATCCTACCTATCACCCAGCCCCCTTCGTTGTCTCCATTTTCCTCCGGGGGCTCCGCCGCAAATTCGATTATGGCAACCACATCTACTGCCATAGACATAATGTTGCTTAAAGAAGACGATGAACAGACGACTGGAGTTCTTGTTTCTCCGTTGTTCGAGGATGATAAGACGATAGCTCATAAGCCCCTTCTTCCTAGGACTTCAAGCTATGCCTCCTCCACATCCAGTTCCTCCTCAGGAAGCTGTATGTACAAGCAGAAGCGGAGGCGAGTTAAGAGCGAAGACCTTTTGTCCTTTCTCTCCGGTGATGTCCGCCACCAGACTGTTGATCATGATGTCGAGAATGTCGATGTTGAGAGAGCTGAGAGATTTCTACTGACTCGCTTCGGTTTGAAACTCTCGAAATATATTCGGGTAGCATTCAGATGGATTGCAAGATTTCTCGCACTTGGTTGCTATTCATTGTTTCTTCTTCCAGGTTTTCTTCAAGTTGGATACTATTATTTCTCATCCAGTCAGATACGCAGAAGTATACCCTATGGTGATAAACCGAGGAATAAGTTGGATCTTTATCTTCCAAAACATATTGACGGGCCAAAACCAGTTGTTGCATTTATCACTGGTGGGGCTTGGATTATTGGCTACAAAGCTTGGGGTTGTCTTCTAGGACAACAATTATCAGAAAGAGATGTCATTGTAGCATGCATCGATTACAGAAATTTTCCTCAGGGAACCATGAGTGATATGATTGATGATGCTTCCCAAGGTATCTCGTTCTTGTGTAATAATATTAGAGAATTTGGAGGCGATCCAAACAGAATTTATCTAATGGGTCAGTCAGCTGGCGCACATATAGCTGCCTGCACACTTTTGGAGCACGCAATGAAAGAGGTTCGCAAAGTAGAAAGTATCTCTTGGAGTGTGTCCCAGATCAAAGCTTATTTTGGTTTGTCAGGAGGGTATAATTTGCTCAATCTGGTAGACTACTTTCACTCTCGAGGTCTATCTCGTTCTCTTTTTCTAAGCATAATGGAAGGAGAACAATCCTTGAAACGATTTTCACCCGAAGTAATGATCTTGGAAGAACCCAACATAGGACCAGCAGTCTCGATTCTTCCTCCCATCATTTTATTCCATGGAACAGCAGACTATTCTATACCATCAGATGCTAGTAAAACTTTTGCTGAGGCTCTTCAAAGCGTTGGAGTGAAAGCCGAAACATTTTTCTATGAAGGAAAGACGCATACAGATGTATTTGTTCAGGATCCGTTGAGGGGTGGGAGAGATCAGATGTTTGAAGATCTTGTTGCGATCATCCATGCCAATGATGCAGAAGCATTGGCGAAAGATGCGGTGGCACCTCCAAGAAGACGCTTTGTACCTGAATTTATGTTGATGTTGGCTCGTAGTGTTAGCCCCTTCTAA 1440 43.68 MRSPQILPITQPPSLSPFSSGGSAANSIMATTSTAIDIMLLKEDDEQTTGVLVSPLFEDDKTIAHKPLLPRTSSYASSTSSSSSGSCMYKQKRRRVKSEDLLSFLSGDVRHQTVDHDVENVDVERAERFLLTRFGLKLSKYIRVAFRWIARFLALGCYSLFLLPGFLQVGYYYFSSSQIRRSIPYGDKPRNKLDLYLPKHIDGPKPVVAFITGGAWIIGYKAWGCLLGQQLSERDVIVACIDYRNFPQGTMSDMIDDASQGISFLCNNIREFGGDPNRIYLMGQSAGAHIAACTLLEHAMKEVRKVESISWSVSQIKAYFGLSGGYNLLNLVDYFHSRGLSRSLFLSIMEGEQSLKRFSPEVMILEEPNIGPAVSILPPIILFHGTADYSIPSDASKTFAEALQSVGVKAETFFYEGKTHTDVFVQDPLRGGRDQMFEDLVAIIHANDAEALAKDAVAPPRRRFVPEFMLMLARSVSPF 479
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 32942393 32945600 - CmPI595203_05g023730.1 Cmu05g2373 417287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g2373 479 ProSitePatterns Carboxylesterases type-B serine active site. 272 287 IPR019826 -
Cmu05g2373 479 PANTHER AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C 118 445 IPR050300 GO:0016298(PANTHER)
Cmu05g2373 479 Gene3D alpha/beta hydrolase 173 428 IPR029058 -
Cmu05g2373 479 Pfam BD-FAE 193 403 IPR049492 -
Cmu05g2373 479 FunFam Isoprenylcysteine alpha-carbonyl methylesterase ICME 174 428 - -
Cmu05g2373 479 SUPERFAMILY alpha/beta-Hydrolases 181 445 IPR029058 -
Cmu05g2373 479 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g1278 Cmu-Chr5:14269468 Cmu05g2373 Cmu-Chr5:32942393 2.30E-135 dispersed
Cmu05g2373 Cmu-Chr5:32942393 Cmu06g0846 Cmu-Chr6:11005014 2.80E-145 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g2373 K15889 - csv:101206426 882.093