Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g2377 ATGAGCCGCGGCAGAAGGAGAAAGCTGCATTTTAGCAAGATCTACTCGTTTGCATGTGGGAAAGCTTCTTTAAAGGATGATCATTCACAACTTGGGGGTCCGGGGTTTTCTCGAGTTGTTTTCTGTAACGAACCAGAGTGTTTTGAGGCAGAAATTCGTAACTACATAGACAATCATATTAGTACAACCAAGTATACTCTAGCTACTTTCCTCCCTAAGTCTTTGTTTGAGCAATTCAGGAGGGTGGCCAATTTCTATTTTTTAGTCAGTGGGATCCTTGCTTTTACTCCTCTTGCTCCTTACACGGCTGTTAGCGCGATTATCCCTCTTATTCTTGTCATTTCAGCGACAATGATCAAAGAAGGGATTGAGGATTGGAGGCGGAAGAAACAGGATATTGAGGTTAACAATAGAAAGGTTAAAGTGCATCAAGGTGATGGAGTTTTTGCTTATACAGAGTGGAAGAATCTGAGAGTGGGTAATATTGTGAGAGTGGAGAAGGATGAATTCTTTCCAGCAGATATTATCTTGCTTTCATCCAGTTATGAGGATGCAATCTGCTATGTTGAGACAATGAACCTTGATGGTGAGACAAATTTGAAACTAAAACAAGCATTGGAGGTGACTTCGCATATGCATGAGGATTCTATGTTCAACAGCTTTAAGGCTATCATAAAATGCGAGGATCCAAATGCAAATTTGTACAGTTTTGTTGGTAGTATGGAGTTGGAAGAGCAACAATATCCTCTGTCTCCTCAACAACTACTCCTTCGAGACTCTAAACTCCGGAATACAGATTATATATATGGGGTGGTTGTCTTTACTGGTCGTGACACAAAGGTTATTCAAAATTCTACGGATCCACCTTCAAAGAGAAGCAAAGTTGAGAGGAAAATGGATAAGATTATATATATTTTGTTCTGTCTTCTATTTTTGCTTGCTCTTGTAGGATCTATATTTTTTGGCCTTGTGACTGACGAGGATTTGGAAAATGGAAGAATGAAGAGATGGTATCTCAGGCCTGATGATGCCAAAATTTTCTTTGATCCAAAAAGGGCTCCAATAGCTGCAATATTTCATTTTCTTACGGCACTGATGTTATATAATTACTTCATTCCAATCTCACTGTATGTATCAATAGAAATTGTCAAAGTTCTTCAGAGCATATTTATCAATCAAGATATTAATATGTATTATGAAGAGGCTGATAAACCTGCTCGTGCTCGCACCTCAAATTTGAATGAAGAACTTGGTCAAGTTGATACAATACTCTCTGACAAGACTGGAACTCTGACCTGTAATTCAATGGAGTTCATTAAGTGTTCTGTGGCAGGGAGGGCTTATGGACGGGGTTTCACGGAGGTAGAAAGGACTATAGGTAGACAAAAGGATTCACCCCTGCATGAAGCTGTAAATGGGAGAAATCACCATGAGGATGCCAATGATAAAACTTCACATATCAAGGGCTTTAATTTTAAGGATGATAGGATTATGAATGGGAACTGGGTTAACGAGCCTCATGCAAATGTAATTCAAATGTTTTTCCGTCTTCTTGCAACTTGTCATACGGCAATACCTGAAATCAATGAGGACACTGGAGAGGTTTCTTACGAGGCTGAATCTCCAGATGAAGCAGCATTTGTGATTGCAGCTAGAGAACTCGGCTTTGAATTCTACAAAAGAACACAGACAAGCATATCACTGCACGAGTTTGATCCTTCCTTAGGCAAGAAAGTTGATAGGACATATAAACTGCTGCATGTTCTGGAGTTTAATAGCTCAAGAAAGCGGATGTCTGTCATAGTAAGAGATGAAGAGGATAAAATATTATTATTCTGTAAAGGTGCAGACAGTATCATGTTTGAAAGACTTGGAAAGAATGGAAGGGAGTTTGAAGAGGAGACCAAAGAACATGTCAATGAGTATGCTGATGCTGGATTGCGGACTTTGATACTTGCCTATCGTGAGCTTGAAGAGGAAGAATACAGAGAATTTGATGACAAGTTCACTAAGGCCAAAAGTTCAGTTAGTGCAGATCGAGAATCACTGATTGAGAAAGTAACTGACAACATTGAGAGGAATTTAATTCTTCTTGGTGCCACTGCTGTTGAGGACAAGCTTCAAAATGGGGTTCCTGAATGCATTGACAGGCTTGCTCAGGCGGGAATTAAGATTTGGGTTTTGACCGGGGACAAAATGGAGACTGCCATTAATATTGGTTTTGCCTGTAGCTTACTAAGACAAGATATGAAGCAGATTGTTATTACCCTGGAGACATCAGAAATTAAGGCGCTAGAAAAGACAGGGGATAAGGCTTCTATCACCAAGGCATCAATGCAATGCGTCCTCGATCAAATTACTCAAGGGAGAGCTCAGATCACTTCACCAAATGGGTTATCTGAAGCATTTGCATTAATTATTGATGGAAAATCACTTTCTTATGCTTTAGAGGACAGTATGAAGGCATTGTTTCTTGAGGTAGCAACACATTGTGCTTCTGTTATTTGCTGCCGTTCATCTCCAAAACAGAAGGCACTGGTAACAAGGTTAGTTAAATCTGGAACACGGAAAACAACTTTAGCTATTGGCGATGGTGCCAATGATGTAGGGATGCTTCAAGAAGCGGACATTGGAGTCGGAATTAGTGGTGCGGAAGGAATGCAGGCCGTTATGTCAAGTGATGTTGCAATTGCACAGTTTAAATATTTAGAGCGCCTGCTTCTTGTGCATGGTCATTGGTGCTACAGAAGGATATCATCAATGATTTGCTACTTTTTCTATAAGAATATTACTTTTGGTTTTACCATATTCCTATACGAAGCATTCACATCATTCTCTGGGCAACCTGTATATAATGATTGGTTTTTATCGCTTTACAATGTTTTCTTCTCGTCGCTTCCAGTGGTAGCTTTGGGAGTTTTTGATCAGGATGTATCTGCAAGACTCTGTCTCCAGTTTCCTCTCTTATACCAACAAGGGGTGCAGAATGTTCTTTTCAGCTGGCTCCGAATACTCAGTTGGATGTTTAATGGATTGTGCAGTGCCGTGATCATTTTCTTCCTTTGCACTAGAGCACTCGAGCATCAGGCATTCAACTCCGATGGGAAAACTGCAGGGCGGGATATTTTGGGTGCAACAATGTACTCTTGTGTTGTTTGGGTTGTGAACTTGCAAATGGCGCTCGCTGTTAGTTACTTCACCTTGATACAGCATCTTTTCATCTGGGGTTCGATTTCGATCTGGTACATTTTTCTCCTGATCTATGGGTCCATGACCCCCACCTTTTCAACCAATGCTTACCATATTTTCATCGAAGTCCTTGCCCCTGGTCCTTCCTACTGGTTTGTGCTTCTGTTTGTGGTGATCACAACACTCATTCCTTACTTCTCCTACTCAGCTATACAGATGAGGTTCCTTCCCATGTATCATCAAATGATTTTATGGATTAGAAATGAAGGGCAACTAGACAACCAAGAGTACTGTGATATTTTCCGGAACACTTCCACTTTCCGATCAACGAGCGTGGGTTCCACAGCACGAAAGGGGAATGAACTCGATCTACGCAAATGTAAGGCCGAGAAAATCCGCGGCGGATTTGGCCATCACGGTGGTGAATTCGTTGAAGCTAATTACGCCGTCGCCGTCGGTATCGGCCTGTCGCATCATCTCGGAGAGTTCGCGGTAGGTCAGAGGATGGCCCATCTTCGCCATGGAACCAGCGAGCTCCGCAGCGGTGATGTAGCCATTGCCATCGCGATCGAAAGATCTGAAAACCTCCAACAACTGCTCTTGATTGACGAGAATATCGTCGTTCATGTCGGGGAGAATGGCATTGACGAGTTCATCGAATTCTATAGAGCCGTTGCCGTTGGAATCCATGTTGGAGAGGAGAGAATGGAGTTGGTCGCCGGAGGGTTTGATGCCGAGGGAGCGGAGAAGGGCGCCGAGCTCGAGCTGCGTGAGGCTGCCGTCGGAGTTCATGTCGAAACGCCTGAAAATGTCGTGCAGCTGCTTGAGCTGCGGGTCGGATTGAATGGAAGCCATGGATTTGGTTCTTCAGACGATTCGACAAGATCCGCAAGGAGGAGTTCGTCGAAGTTGGGGGATTTGGAAAATGGGGAGATTGGTGAGGGGGAAGGGTTGGCCTATCCGAGACTCCCTGCGTAA 4167 42.74 MSRGRRRKLHFSKIYSFACGKASLKDDHSQLGGPGFSRVVFCNEPECFEAEIRNYIDNHISTTKYTLATFLPKSLFEQFRRVANFYFLVSGILAFTPLAPYTAVSAIIPLILVISATMIKEGIEDWRRKKQDIEVNNRKVKVHQGDGVFAYTEWKNLRVGNIVRVEKDEFFPADIILLSSSYEDAICYVETMNLDGETNLKLKQALEVTSHMHEDSMFNSFKAIIKCEDPNANLYSFVGSMELEEQQYPLSPQQLLLRDSKLRNTDYIYGVVVFTGRDTKVIQNSTDPPSKRSKVERKMDKIIYILFCLLFLLALVGSIFFGLVTDEDLENGRMKRWYLRPDDAKIFFDPKRAPIAAIFHFLTALMLYNYFIPISLYVSIEIVKVLQSIFINQDINMYYEEADKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGRAYGRGFTEVERTIGRQKDSPLHEAVNGRNHHEDANDKTSHIKGFNFKDDRIMNGNWVNEPHANVIQMFFRLLATCHTAIPEINEDTGEVSYEAESPDEAAFVIAARELGFEFYKRTQTSISLHEFDPSLGKKVDRTYKLLHVLEFNSSRKRMSVIVRDEEDKILLFCKGADSIMFERLGKNGREFEEETKEHVNEYADAGLRTLILAYRELEEEEYREFDDKFTKAKSSVSADRESLIEKVTDNIERNLILLGATAVEDKLQNGVPECIDRLAQAGIKIWVLTGDKMETAINIGFACSLLRQDMKQIVITLETSEIKALEKTGDKASITKASMQCVLDQITQGRAQITSPNGLSEAFALIIDGKSLSYALEDSMKALFLEVATHCASVICCRSSPKQKALVTRLVKSGTRKTTLAIGDGANDVGMLQEADIGVGISGAEGMQAVMSSDVAIAQFKYLERLLLVHGHWCYRRISSMICYFFYKNITFGFTIFLYEAFTSFSGQPVYNDWFLSLYNVFFSSLPVVALGVFDQDVSARLCLQFPLLYQQGVQNVLFSWLRILSWMFNGLCSAVIIFFLCTRALEHQAFNSDGKTAGRDILGATMYSCVVWVVNLQMALAVSYFTLIQHLFIWGSISIWYIFLLIYGSMTPTFSTNAYHIFIEVLAPGPSYWFVLLFVVITTLIPYFSYSAIQMRFLPMYHQMILWIRNEGQLDNQEYCDIFRNTSTFRSTSVGSTARKGNELDLRKCKAEKIRGGFGHHGGEFVEANYAVAVGIGLSHHLGEFAVGQRMAHLRHGTSELRSGDVAIAIAIERSENLQQLLLIDENIVVHVGENGIDEFIEFYRAVAVGIHVGEERMELVAGGFDAEGAEKGAELELREAAVGVHVETPENVVQLLELRVGLNGSHGFGSSDDSTRSARRSSSKLGDLENGEIGEGEGLAYPRLPA 1388
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 32996256 33006153 + CmPI595203_05g023770.1 Cmu05g2377 417291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g2377 1388 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Cmu05g2377 1388 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 30 1144 - GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER)
Cmu05g2377 1388 SUPERFAMILY Calcium ATPase, transmembrane domain M 53 1140 IPR023298 -
Cmu05g2377 1388 FunFam Phospholipid-transporting ATPase 540 698 - -
Cmu05g2377 1388 Gene3D - 698 902 IPR023214 -
Cmu05g2377 1388 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Cmu05g2377 1388 PRINTS P-type cation-transporting ATPase superfamily signature 862 881 - -
Cmu05g2377 1388 FunFam Phospholipid-transporting ATPase 116 286 - -
Cmu05g2377 1388 Pfam Cation transport ATPase (P-type) 520 624 - -
Cmu05g2377 1388 NCBIfam phospholipid-translocating P-type ATPase 55 1146 IPR006539 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro)
Cmu05g2377 1388 FunFam Phospholipid-transporting ATPase 698 902 - -
Cmu05g2377 1388 MobiDBLite consensus disorder prediction 1349 1388 - -
Cmu05g2377 1388 SUPERFAMILY Calcium ATPase, transduction domain A 139 283 IPR008250 -
Cmu05g2377 1388 Gene3D - 544 697 IPR023299 GO:0000166(InterPro)
Cmu05g2377 1388 CDD P-type_ATPase_APLT_Dnf-like 57 1022 - -
Cmu05g2377 1388 SFLD Haloacid Dehalogenase 408 913 - -
Cmu05g2377 1388 SFLD p-type atpase 408 913 IPR044492 -
Cmu05g2377 1388 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 497 699 IPR023299 GO:0000166(InterPro)
Cmu05g2377 1388 Gene3D - 115 286 - -
Cmu05g2377 1388 SUPERFAMILY HAD-like 419 917 IPR036412 -
Cmu05g2377 1388 Pfam Phospholipid-translocating P-type ATPase C-terminal 890 1140 IPR032630 -
Cmu05g2377 1388 NCBIfam HAD-IC family P-type ATPase 830 944 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cmu05g2377 1388 Pfam Phospholipid-translocating ATPase N-terminal 40 106 IPR032631 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g2377 Cmu-Chr5:32996256 Cmu05g2538 Cmu-Chr5:34158960 2.10E-278 dispersed
Cmu06g0842 Cmu-Chr6:10853925 Cmu05g2377 Cmu-Chr5:32996256 0.00E+00 transposed
Cmu09g0074 Cmu-Chr9:926484 Cmu05g2377 Cmu-Chr5:32996256 0.00E+00 transposed
Cmu04g1180 Cmu-Chr4:26358855 Cmu05g2377 Cmu-Chr5:32996256 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g2377 K01530 - csv:101207148 2218.74