Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g2414 ATGGGGAAAACCGGGGCCAAGTTGCCAAGTTTCTGCCTGAACCGGATCCGGCCTCATGTTCGAGTTCCTATTCAATCCAAACCGGACTCTGTTTCTGTAAAAACCGGTCCTAACAAGAAGGCTGATGATTCCGTTGATGACATTCAAGTTGGAGCTAAGCCAGTTTTGGGAATTGGAAGGAAGATCATGATTGTGGTTGATTCCACCATTGAAGCTGAAGGAGCTCTTCATTGGGCTCTCTCTCACACTGTCCAAAATCAAGACAACATTCTTCTTCTTCATCTCACTAAGCCTTCAACGTCAAAAGGAGAAGGACTGAGTAAGGAGACAGCACCGAGAGCTTATGAATTGGTTCATTCCATGAGAACTTTATGCCAATTGAAGAGACCTGAGGTGGAAACGGAAGTTGCGGTGGTGGAAGGAGGGAAGGAGAAAGGGGCAGTGATAGTGGAAGAAGCGAGAAAGCGAGGGGTGTCGTTGCTGGTTTTGGGGCAGAAGAAACGGTCGACGACATGGCGGCTTCTGATGGTGTGGGCAGGCCACCGGTGGGGCGGCGGAGGCGGCGGTGGCGGTGGCGGTGTGGTGGAGTATTGTATACAAAATGCGAGCTGTATGGCGATTGCGGTGAGAAGGAAGAGCAAGAAATTGGGTGGTTATTTGATCACTACAAAGCGTCAAAAGGATTTCTGGCTTTTGGCTTAA 702 49.57 MGKTGAKLPSFCLNRIRPHVRVPIQSKPDSVSVKTGPNKKADDSVDDIQVGAKPVLGIGRKIMIVVDSTIEAEGALHWALSHTVQNQDNILLLHLTKPSTSKGEGLSKETAPRAYELVHSMRTLCQLKRPEVETEVAVVEGGKEKGAVIVEEARKRGVSLLVLGQKKRSTTWRLLMVWAGHRWGGGGGGGGGGVVEYCIQNASCMAIAVRRKSKKLGGYLITTKRQKDFWLLA 233
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 33277792 33278689 - CmPI595203_05g024140.1 Cmu05g2414 417328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g2414 233 CDD USP_Like 61 209 - -
Cmu05g2414 233 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 1 233 - -
Cmu05g2414 233 Gene3D HUPs 59 217 IPR014729 -
Cmu05g2414 233 Pfam Universal stress protein family 60 210 IPR006016 -
Cmu05g2414 233 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 60 213 - -
Cmu05g2414 233 MobiDBLite consensus disorder prediction 25 45 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g2414 Cmu-Chr5:33277792 Cmu11g1567 Cmu-Chr11:27945741 6.10E-21 dispersed
Cmu04g1196 Cmu-Chr4:26516340 Cmu05g2414 Cmu-Chr5:33277792 3.60E-42 wgd
Cmu05g2414 Cmu-Chr5:33277792 Cmu06g1597 Cmu-Chr6:27176213 2.20E-47 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g2414 - - - 0.0