Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g2417 ATGGGAGAAAATGATGCCTCACAACATTTCATCAATGCCAACAACACTTTGGAAGCTGACATAAAGAATGATAATCGGCTTGATTTTGTCAATTTTAAGTTTCGTGCCGATGCTCGTCTTCCACCTTGCTCAGTTTCTTCCTTCTCTGCAACAGCGACCCCTTTTCCATTTTTCTCCTCTAATTTTTTCATTGGGAGCTGTCGATTCTTCAACTGCATGCGATACGATTTTTGTAATGCCCCAAAATTTAGTTCAATGCTCGCTAGCTATAGAGAGGTGAGGATCCATGAAAGTTTGGAGGAGCTAAGTACTGATTTAGCTGACTATATTGCTGAATTATCAGAGGCATCTGTGAAAGAACGTGGGGTATTTTCTATTGCGTTATCTGGTGGTTCTCTGATTAGTTTAATGGGAAAGCTCTGTGAAGCTCCTTACAACAAGACTGTCGACTGGGCCAAGTGGTATATATTTTGGGCTGATGAACGTGTTGTTGCAAAAAGCCATGCGGACAGCAATTATAAGCTTGCAAAGGATAACCTTCTTTCCAAGGTGCCAATTGTTCCCAGCCATGTACACTCGATCAATGATTCGGTGTCAGCTGAGGAAGCTGCTGATGAGTACAAGTTCGTCCTTCGACAGTTAGTTAAATCCCGCATCGTAAGTGTGTCTGATGTGAGTGACAGTCCCAAGTTTGACCTCATACTACTTGGAATGGGTTCTGATGGCCATGTCGCCTCATTATTCCCCAACCACTCTGTGGTCGAGGAGAAAGATGAATGGGTTGCCTTCATAACCGATTCTCCGAAACCTCCTCCAGAGAGAATCACCTTCACATTGCCTGTGATCAACTCTGCATCAAATGTGGCGATTGTTGTGACAGGCAAAAACAAAGCAGAGGCTGTACATTTGGCCATCGATGATGGAGGAGCAGACTGCCCACTCCTACCTGCGAGGCTTGAGGCATTTGCTTGGCCTTGGAAATGGAAACCCAAATCCAGTTTCCGATTACATTTGCCTCGTGAGAGAAGATTCCCTTCAATGTTTCATCATTTCATTAATATGAAAATTGCATCGCATTCAACGAGTTGTAGGCCTCTGCTCCATCATTTCATCGCGCAGAAGATGTCGCCATTTGAGTTGTCGATGACGTTCCCTTACGATGTCTGA 1167 44.22 MGENDASQHFINANNTLEADIKNDNRLDFVNFKFRADARLPPCSVSSFSATATPFPFFSSNFFIGSCRFFNCMRYDFCNAPKFSSMLASYREVRIHESLEELSTDLADYIAELSEASVKERGVFSIALSGGSLISLMGKLCEAPYNKTVDWAKWYIFWADERVVAKSHADSNYKLAKDNLLSKVPIVPSHVHSINDSVSAEEAADEYKFVLRQLVKSRIVSVSDVSDSPKFDLILLGMGSDGHVASLFPNHSVVEEKDEWVAFITDSPKPPPERITFTLPVINSASNVAIVVTGKNKAEAVHLAIDDGGADCPLLPARLEAFAWPWKWKPKSSFRLHLPRERRFPSMFHHFINMKIASHSTSCRPLLHHFIAQKMSPFELSMTFPYDV 388
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 33307178 33313897 - CmPI595203_05g024170.1 Cmu05g2417 417331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g2417 388 Gene3D - 88 323 - -
Cmu05g2417 388 NCBIfam 6-phosphogluconolactonase 95 312 IPR005900 GO:0005975(InterPro)|GO:0006098(InterPro)|GO:0017057(InterPro)
Cmu05g2417 388 Coils Coil 99 119 - -
Cmu05g2417 388 CDD 6PGL 100 319 IPR005900 GO:0005975(InterPro)|GO:0006098(InterPro)|GO:0017057(InterPro)
Cmu05g2417 388 PANTHER 6-PHOSPHOGLUCONOLACTONASE 84 320 IPR039104 -
Cmu05g2417 388 Pfam Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 99 313 IPR006148 GO:0005975(InterPro)
Cmu05g2417 388 FunFam Probable 6-phosphogluconolactonase 88 328 - -
Cmu05g2417 388 SUPERFAMILY NagB/RpiA/CoA transferase-like 92 317 IPR037171 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g0020 Cmu-Chr1:169254 Cmu05g2417 Cmu-Chr5:33307178 7.40E-71 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g2417 K01057 - csv:101210739 414.846