Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g2425 ATGTATTTAGTGGAGAGTAAAGAAGGGGCTATAGCATGTATGGTATTGTCCCTCTTCTTTTTGGGAACCTTCCCTGCTCTTTTAAGTCTACTTGAACGGCGAGGGCGTCTTCCTCAGCATACTTTTCTTGATTACTCCATAACAAATTATTTAGCTGCTGTAATTTTTGCGCTGACACTTGGTCAGTTTGGAAATAGCTCACCAGATAGACCAAATTTTATCCAACAGCTTTCTCAGGTGCAGGATAATTGGGCTTCTGTTATATTTGCTATGGCTGGTGGTGCAGCGCTGAGTATTGGAAATCTTTCTTCTCAATATGCTTTGGCATTTGTTGGTTTGTCAGTTACAGAAGTGCTCAATTGTAGCATAATAGTAGTTTTAGGCTCAACCATGAACTATTTTCTTGATGGCAAAATTAATAGAGCGGAGATTCTTTTCCCCGGCATTGCTTGCTTTTTGATTGCGGTTTTTCTTGGCTCTGCTGTTCACTTATCCAACACAGCTGATGACAAAATAAAGTTGGAAAGCTTGTCCATCGATTCAAAAAAGGAGTCCAAGGCAATTGCTGTCTCTCCAATATCAGTTGAATCAGCGGACCTGGAGAATGCCGATTGTTCCTCGCGAAATGCAGAAGCTGGAACTGCAGACTTTCTTGTTCAAGTTGAAAGCAGAAGGTCCATCAAGGTGTCTGGTAAGAGCACACTAGTTGGACTGTGCATAATTTTCTTTGCTGGTGTTTCCCTTTCACTCTTCTCACCTGCATTCAATTTGGCTACAAATGATCAATGGCACACTCTAAAGGAAGGCATCCCACACTTGTCTGTCTATACTGCATTTTTCTACTTCTCGACCTCTTTTTTCGTCTTGGCCGTCGTTCTTAACATCATCCTCCTTTACCGCCCGATACTGAACTTACCCAAAACATCATTCAAGGCTTATCTGAATGATTGGGATGGTAGAGGATGGGCCTTTTTGGCTGGATTTTTGTGTGGATTTGGCAATGGTTTGGAGTTCATGGGTGGTCAAGCTGCTGGATATGCAGCAGCAGATTCTGTGGAGGCATTTCCACTGGTGAGCACAATTTGGGGTGTTGTTCTGTTTGGAGAATACCGAAGATCGTCAAGAAAAACTCACGTTCTGCTAGTGAGCATGTTGTTTATGTTCACAGTAGCTGTTGTTGTTCTAATGGCTTCATCGGGACATAGACTTGAGCCAGGTTGGCATCCTCAAGCAGATGTAGAACTCAACAATCAACACACAAGAAAGAAAAAGTTCAAATTGAAGCGAAAAAGGTACTTGATCTTACATGTTTTCTCATTGGAAGGAAACAATGAGGCTGATGAATATCACCTTTCTCTGCAGGATTTCTTTGCCATTTCATAA 1383 41.94 MYLVESKEGAIACMVLSLFFLGTFPALLSLLERRGRLPQHTFLDYSITNYLAAVIFALTLGQFGNSSPDRPNFIQQLSQVQDNWASVIFAMAGGAALSIGNLSSQYALAFVGLSVTEVLNCSIIVVLGSTMNYFLDGKINRAEILFPGIACFLIAVFLGSAVHLSNTADDKIKLESLSIDSKKESKAIAVSPISVESADLENADCSSRNAEAGTADFLVQVESRRSIKVSGKSTLVGLCIIFFAGVSLSLFSPAFNLATNDQWHTLKEGIPHLSVYTAFFYFSTSFFVLAVVLNIILLYRPILNLPKTSFKAYLNDWDGRGWAFLAGFLCGFGNGLEFMGGQAAGYAAADSVEAFPLVSTIWGVVLFGEYRRSSRKTHVLLVSMLFMFTVAVVVLMASSGHRLEPGWHPQADVELNNQHTRKKKFKLKRKRYLILHVFSLEGNNEADEYHLSLQDFFAIS 460
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 33362218 33367914 - CmPI595203_05g024250.1 Cmu05g2425 417339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g2425 460 PANTHER UREIDE PERMEASE 1-RELATED-RELATED 1 402 IPR030189 GO:0005274(PANTHER)|GO:0015505(PANTHER)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0071705(InterPro)
Cmu05g2425 460 Pfam Ureide permease 41 398 IPR009834 GO:0016020(InterPro)|GO:0071705(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g2425 Cmu-Chr5:33362218 Cmu09g0848 Cmu-Chr9:8263591 8.60E-168 dispersed
Cmu05g2424 Cmu-Chr5:33359339 Cmu05g2425 Cmu-Chr5:33362218 5.20E-169 tandem
Cmu05g2425 Cmu-Chr5:33362218 Cmu05g2426 Cmu-Chr5:33370420 5.10E-19 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g2425 - - - 0.0