Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g2427 ATGGCTGTTTTCGTGTTCTTAGTGTTTGTTCTTGCGCTAACTGGTCGATCTTATGCCAACTATTGCTTGTGTAGAGATGGGGCAACCCAACAAGCCCTTCAGAAGGCACTGGACTATGCTTGTGGAGCTGGAGCTGACTGTTCTCCAATCCTCTCCAGTGGCGCTTGTTTTCAGCCCAACACTGTCAAAGATCACTGTAATTACGCTGTCAATAGTTATTTCCAGCGAAAGGGGCAAGTCCAAGGAAGCTGTGACTTTAATGGCGCCGCCACGCCCAGCGTTACCCTTACTGCCTCTGTGCCCTCTGGTTGTGTCTATCCTTCTAGCCCCAGCAATGCGGGAACATCGCCGACGAACTCCGGCGGAACCACACCGACGATGACACCAGGGACGCCGTCGACGACGAATCCAGGAATGACGCCGACGGTGTTCGGCAACGGAATCAGCCCGAGTGGGAGCGGCTCCGGTTTCAACGACGGCAGCGGCAGCGTGGGTTTCAATGAAAAGAGGAACTTGCTTTTGGCAGTGGGCCTAACTCTGTGGCTTTCCGTATTGTTTCTCTGGGGATGA 570 53.86 MAVFVFLVFVLALTGRSYANYCLCRDGATQQALQKALDYACGAGADCSPILSSGACFQPNTVKDHCNYAVNSYFQRKGQVQGSCDFNGAATPSVTLTASVPSGCVYPSSPSNAGTSPTNSGGTTPTMTPGTPSTTNPGMTPTVFGNGISPSGSGSGFNDGSGSVGFNEKRNLLLAVGLTLWLSVLFLWG 189
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 33375109 33376362 - CmPI595203_05g024270.1 Cmu05g2427 417341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g2427 189 SMART X8_cls 20 106 IPR012946 -
Cmu05g2427 189 Gene3D - 17 108 - -
Cmu05g2427 189 MobiDBLite consensus disorder prediction 109 156 - -
Cmu05g2427 189 Pfam X8 domain 21 91 IPR012946 -
Cmu05g2427 189 PANTHER BETA-1,3 GLUCANASE 10 109 IPR044788 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu04g1223 Cmu-Chr4:26722837 Cmu05g2427 Cmu-Chr5:33375109 2.60E-29 wgd
Cmu05g2427 Cmu-Chr5:33375109 Cmu06g1618 Cmu-Chr6:27385268 2.50E-33 wgd
Cmu05g2427 Cmu-Chr5:33375109 Cmu08g0980 Cmu-Chr8:22072629 5.30E-39 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g2427 - - - 0.0