Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g2430 ATGTCGTCCGCCGAGAAGGAAAGAGAGACGCAGGTCTACATGGCCAAGCTTGCAGAACAGGCCGAACGCTATGACGAAATGGTGGAGTGTATGAAGAAAGTTGCTAAACTAGACGTTGAGCTAACCGTAGAAGAGAGAAACTTGCTTTCTGTTGGATACAAAAATGTTATAGGTGCTAGACGAGCTTCTTGGCGCATCATGTCCTCGATTGAACAGAAGGAAGAGTCCAAAAGCAATGAGAATAATGTTAAACTTATTAAGAGTTACCGTCAGAAGGTGGAGGAAGAGCTTTCCAAGATCTGTACCGATATTCTGACTATTATTGACAAGCACCTCATCCCTTCTTCAACCTCTTCAGAAGCATCGGTTTTCTATTACAAGATGAAAGGTGACTATTACCGATATCTTGCTGAGTTCAAAACAGATCAAGAAAGAAAGGAGGCAGCTGACCAGTCATTGAAGGGATACGAGACTGCTTCGACCACCGCCAATACCGAACTTCCATCAACTCACCCTATCCGTCTTGGCCTTGCCCTCAACTTTTCTGTCTTCTACTATGAGATTATGAATTCCCCTGAAAGGGCTTGCCACTTGGCTAAACAAGCTTTTGACGAGGCAATTGCAGAGTTGGATACTTTGAGTGAGGAATCATACAAGGACAGTACCCTCATAATGCAGTTGCTGAGAGATAACCTCACTCTCTGGACATCTGATTTACCAGAAGATGGAGGTGAAGAGAACGTCAAAGGTGAGGATTCCAAACCGGCAGCACCAGCCCCCGAGATGGAGCTTTGA 795 45.03 MSSAEKERETQVYMAKLAEQAERYDEMVECMKKVAKLDVELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKSNENNVKLIKSYRQKVEEELSKICTDILTIIDKHLIPSSTSSEASVFYYKMKGDYYRYLAEFKTDQERKEAADQSLKGYETASTTANTELPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEENVKGEDSKPAAPAPEMEL 264
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 33394200 33397097 - CmPI595203_05g024300.1 Cmu05g2430 417344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g2430 264 Coils Coil 14 34 - -
Cmu05g2430 264 Gene3D - 1 250 IPR036815 -
Cmu05g2430 264 Pfam 14-3-3 protein 14 236 IPR023410 -
Cmu05g2430 264 SMART 1433_4 8 250 IPR023410 -
Cmu05g2430 264 PANTHER 14-3-3 PROTEIN 7 241 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Cmu05g2430 264 ProSitePatterns 14-3-3 proteins signature 2. 218 237 IPR023409 -
Cmu05g2430 264 ProSitePatterns 14-3-3 proteins signature 1. 46 56 IPR023409 -
Cmu05g2430 264 MobiDBLite consensus disorder prediction 238 264 - -
Cmu05g2430 264 PIRSF 14-3-3 2 248 IPR000308 -
Cmu05g2430 264 MobiDBLite consensus disorder prediction 242 258 - -
Cmu05g2430 264 FunFam 14-3-3 protein epsilon 3 249 - -
Cmu05g2430 264 PRINTS 14-3-3 protein zeta signature 155 181 IPR000308 -
Cmu05g2430 264 PRINTS 14-3-3 protein zeta signature 209 238 IPR000308 -
Cmu05g2430 264 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
Cmu05g2430 264 PRINTS 14-3-3 protein zeta signature 120 142 IPR000308 -
Cmu05g2430 264 PRINTS 14-3-3 protein zeta signature 182 208 IPR000308 -
Cmu05g2430 264 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
Cmu05g2430 264 SUPERFAMILY 14-3-3 protein 7 238 IPR036815 -
Cmu05g2430 264 Coils Coil 196 216 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g2430 Cmu-Chr5:33394200 Cmu08g0982 Cmu-Chr8:22088518 4.10E-130 dispersed
Cmu05g2430 Cmu-Chr5:33394200 Cmu08g1050 Cmu-Chr8:22805203 1.50E-108 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g2430 K06630 - csv:101221275 485.723