Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g2434 ATGGCAGCATTGCGATTACCATCGCCCTGTGTTAATTCTAATAATCCACAATCCCCAAAACTCAAATTCCCATCCACCTTCGCTTCAGAGTCTAGTTTCGGGACCAATTGGACGAGGCTTCTGTTGTTCAGAGCTTCGTTCTCGAGTTCTTCAAGAAGGAAGCTGTGCATTAGAAACGTAGCCAGCGATCGACAGAAACAACTGAAGGAGCCGGTCAACGGAGAAGTTGTAGACGACTTCGATAGCTTTCTTCCAGATTCGGCGTCCATTGCTGCAAGTATTAAGTACCATTCGGAATTCACGCCTTCTTTCTCACCGGAGGGCTTTGGGCTTTCTAAGGCATACTATGCAACTGCTGAAAGTGTTCGTGATATGCTTATCATCAACTGGAATGCTACGTATGAGTACTATGAAAAGATGAATGTGAAGCAGGCCTACTATCTGTCGATGGAGTTTTTACAGGGTAGGGCATTGCTAAATGCAATTGGAAATCTGGAACTATCAGGAATTTATGCAGATGCTTTAAGAGTGTTAGGATGTAATCTCGAGGAGGTAGCACGGCAGGAATCGGATGCTGCACTAGGAAATGGAGGATTAGGGCGGCTTGCTTCCTGCTTTCTGGACTCCCTGGCAACACTAAACTATCCAGCATGGGGATATGGACTGAGATACAAGTATGGTTTGTTCAAACAGCTTATTACAAAAGATGGACAGGAGGAAGTGGCCGAAAATTGGCTAGAGATGGGCAATCCCTGGGAAATTGCAAGACACGACATCTCCTATCCTGTGAAATTCTATGGTGAAGTCATTTCAGGCGCAGATGGAAGCAAGCAATGGGTTGGAGGAGAAAATATCACTGCTGTTGCCTATGATGTCCCAATACCAGGTTATAAAACTAAAACCACGATAAACCTCCGTTTGTGGTCCACAAAGGTTGCTCCCGAACAATTTAATTTGAGTTCTTTCAATGTTGGAGATCATGCCAATGCATATGCAGCCATAAAGAAAGCTGAAAAGATCTGTTACGTACTGTACCCTGGAGACGAGTCACTGGAGGGAAAGACTCTTAGACTGAAACAGCAATACACATTGTGCTCTGCTTCCCTTCAAGATATTGTCGCACGTTTTGAGAGGAGATCCGGGGAGACTGTGGACTGGGAAAATTTTCCAGAAAAGGTTGCTGTGCAGATGAATGATACCCATCCTACACTTTGTATCCCTGAGCTGATAAGAATATTGATGGATGTGAAAGGGTTAACCTGGAAAGAAGCTTGGGACATCACTCGTAGAACTGTCGCCTACACAAATCATACAGTTCTGCCGGAGGCGCTGGAAAAATGGGGTTTCCCCCTCATGCAGGAACTACTTCCTCGACATGTTCAGATAATTGAAATGATTGACGAGGAGCTTATCCATTCCATCATTGCTAAGTACGGTACAAAAGATCTTGAGTTGTTGCAGCAAAAGCTGAAGCAAATGAGAGTTCTAGAAAATTTTGAATTACCAGACTCGGTAATGGAACTTCTAGTAAATTCAGCGGAGTCTGCGGTAGCAGTTGATCTCGTTGAGGAAGCTGAAATTCTGGATGAGGAATCATTACCTGGTAAAGAAGTAGACGAGAATGAAGACAAAAGTATTGCGAAGAAAATAAATATTTCATTTAAAGTTGATCCAAAGCATCCAAAGATGATTCGCATGGCTAATTTGTCTGTTGTTGGTGGATATGCTGTAAATGGTGTTGCTGAAATTCATAGTGAAATTGTTAGAACTGAAGTTTTTAGCGACTTTTATGAGTTGTGGCCTAAGAAATTTCAAAACAAAACGAACGGAGTGACACCAAGAAGATGGCTCCGTTTTTGCAATCCGGACCTGAGTAAAATCATCACAAAGTGGACTGGAACAGAGCACTGGGTGACAGATACTGAAAAACTGGCAATACTCCGAGAGTTCGCTGATAACGAGGATCTCCAGTCCATGTGGGAGGAAGCTAAAAGAATAAACAAATTGAAAGTTGTCTCTTTTCTTAAAGAAAAAACTGGCTATTTAGTCAGCCCTGATGCAATGTTTGACGTACAGGTAAAACGCATCCATGAATACAAGCGGCAGTTGTTGAACATCCTGGGGATCGTCTATCGTTATAAACAAATGAAAGAAATGACTCAAGAGGAAAGAGAAGCCAAGTTTGTTCCTCGAGTTTGTATATTTGGCGGGAAAGCATTTGCTACATACGTCCAGGCCAAAAGGATTGTGAAATTCATTGTTGATGTTGGAGCTACCGTCAATAACGATCCTGATATAGGAGATCTTTTGAAGGTAGTCTTTGTTCCAGATTACAATGTGAGTGTAGCAGAAGTGCTCATTCCTGGCAGTGATCTTTCCCAGCATATCAGCACGGCTGGAATGGAGGCCAGTGGTACCAGCAACATGAAGTTTGCAATGAATGGCTGTGTACTAATTGGAACATTAGATGGGGCAAATGTAGAGATAAGAGAAGAAGTTGGAGAAGACAACTTTTTCCTCTTTGGTGCAAGGGCTCATGAAATTGCTGGCCTAAGAAAAGAAAGAGCTGAAGGCAAGTTTGTTCCTGACCCACGGTTTGAGGAAGTGAAGGCCTTCGTAAGAAGTGGGGTTTTTGGTTCCAATAACTATGAAGAACTCATGGGATCTTTAGAAGGAAATGAAGGTTATGGTCGGGCAGACTATTTCCTTGTTGGCAAGGACTTCCCTAGTTACATAGAGTGCCAAGACAGGGTTGATGAGGCCTATCGAGATCAAAAGAGATGGACCAAGATGTCGATCTTAAACACAGCTGGTTCATTCAAGTTCAGCAGTGACAGAACCATTCATGAGATCATTCCTAGGAGTCACATAAATTCTCGAGTGAATTCAACTAAGAATCACTGCAATCCGACCTAG 2916 42.94 MAALRLPSPCVNSNNPQSPKLKFPSTFASESSFGTNWTRLLLFRASFSSSSRRKLCIRNVASDRQKQLKEPVNGEVVDDFDSFLPDSASIAASIKYHSEFTPSFSPEGFGLSKAYYATAESVRDMLIINWNATYEYYEKMNVKQAYYLSMEFLQGRALLNAIGNLELSGIYADALRVLGCNLEEVARQESDAALGNGGLGRLASCFLDSLATLNYPAWGYGLRYKYGLFKQLITKDGQEEVAENWLEMGNPWEIARHDISYPVKFYGEVISGADGSKQWVGGENITAVAYDVPIPGYKTKTTINLRLWSTKVAPEQFNLSSFNVGDHANAYAAIKKAEKICYVLYPGDESLEGKTLRLKQQYTLCSASLQDIVARFERRSGETVDWENFPEKVAVQMNDTHPTLCIPELIRILMDVKGLTWKEAWDITRRTVAYTNHTVLPEALEKWGFPLMQELLPRHVQIIEMIDEELIHSIIAKYGTKDLELLQQKLKQMRVLENFELPDSVMELLVNSAESAVAVDLVEEAEILDEESLPGKEVDENEDKSIAKKINISFKVDPKHPKMIRMANLSVVGGYAVNGVAEIHSEIVRTEVFSDFYELWPKKFQNKTNGVTPRRWLRFCNPDLSKIITKWTGTEHWVTDTEKLAILREFADNEDLQSMWEEAKRINKLKVVSFLKEKTGYLVSPDAMFDVQVKRIHEYKRQLLNILGIVYRYKQMKEMTQEEREAKFVPRVCIFGGKAFATYVQAKRIVKFIVDVGATVNNDPDIGDLLKVVFVPDYNVSVAEVLIPGSDLSQHISTAGMEASGTSNMKFAMNGCVLIGTLDGANVEIREEVGEDNFFLFGARAHEIAGLRKERAEGKFVPDPRFEEVKAFVRSGVFGSNNYEELMGSLEGNEGYGRADYFLVGKDFPSYIECQDRVDEAYRDQKRWTKMSILNTAGSFKFSSDRTIHEIIPRSHINSRVNSTKNHCNPT 971
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 33425068 33431425 - CmPI595203_05g024340.1 Cmu05g2434 417348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g2434 971 Gene3D Glycogen Phosphorylase B; 80 613 - -
Cmu05g2434 971 PIRSF Glucan_phosphorylase_GlgP 107 969 IPR000811 GO:0005975(InterPro)|GO:0008184(InterPro)
Cmu05g2434 971 Pfam Carbohydrate phosphorylase 177 497 IPR000811 GO:0005975(InterPro)|GO:0008184(InterPro)
Cmu05g2434 971 Pfam Carbohydrate phosphorylase 549 950 IPR000811 GO:0005975(InterPro)|GO:0008184(InterPro)
Cmu05g2434 971 ProSitePatterns Phosphorylase pyridoxal-phosphate attachment site. 802 814 IPR035090 -
Cmu05g2434 971 FunFam Alpha-1,4 glucan phosphorylase 611 943 - -
Cmu05g2434 971 CDD GT35_Glycogen_Phosphorylase 93 950 - -
Cmu05g2434 971 PANTHER GLYCOGEN PHOSPHORYLASE 63 951 IPR000811 GO:0005737(PANTHER)|GO:0005975(InterPro)|GO:0005980(PANTHER)|GO:0008184(InterPro)|GO:0008184(PANTHER)|GO:0030170(PANTHER)
Cmu05g2434 971 FunFam Alpha-1,4 glucan phosphorylase 84 512 - -
Cmu05g2434 971 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 85 950 - -
Cmu05g2434 971 Gene3D Glycogen Phosphorylase B; 614 943 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g1391 Cmu-Chr3:9170068 Cmu05g2434 Cmu-Chr5:33425068 1.80E-223 dispersed
Cmu05g2434 Cmu-Chr5:33425068 Cmu07g0739 Cmu-Chr7:17334027 0.00E+00 dispersed
Cmu05g2434 Cmu-Chr5:33425068 Cmu02g1976 Cmu-Chr2:33545794 7.50E-299 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g2434 K00688 - csv:101221746 1739.16