Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g2442 GTTCTTGAGTTTTTCGAATCGGAGGATGTGGGTTTAAGGAATGGGAACAAAGGTGCAAGTGGTCAATACTATAATGGAATTCTGCCAAGAGCTACCTCCGATGCATATCTAGGTTGTGATAGAGATGCTGTGAAGAGGACAATGCTTGAGCATGAAGCCATATTCAAGAACCAGGTTCGTGAGCTGCATCGGTTATATATAAAACAGAGAGAGTTAATGAATGATATTAAAAGATCAGAGCACAGACACCCGATACCGGTGGACATATCATTCTCATCTAGTCCTCTAGCATCTCAAAGTACTCCTGATGGTGCAAGGAAATGGCATCTCCCAAGCTTTCCTCTTGCAATTTCTTCCAGTGGACCATCTGTACCTGGTGTTGAAGATGTAAAATCATCTTTAAGTTCTTTGAAAGAAAACAATAGAAGTGATGGCCTCTTACCATCCCAAAATGGAACCAGTTCAAAGGACTGTGAGGTACTAGAATCTAGACCCTCAAAGTCTAGGAGGAAAACCTTTGATCTTCAACTTCCAGCAGACGAGTACATTGATAGCGAAGAGGGGGAGGTATTTCAAGATGAAAAAGTGCCTCCCACGTTGGGTTGCCATTCAAATGGTAACAAGAAATTTGAGACTCAGAGTTGTGTGACGGCAAATTTGAATGTGAATCCTAGTGAAAAAAGTGGTGGCCAAAGTGCTGCTTTGAGAACTGACTCACATTTATGGAACAGACATGGTTTGGCTGACTTGAATGAGCCTGTTCAGGTCGAGGAGGCAAATGGGTCCAATTTTTTTGATCTTCCTAATGCTCGTGACTCCAGCAATGGGGAGACTCAAGGCCCCATTGTATCGTCTACGAAGCAAGAAATTTTTCTGAGCTCGAATATTAAAGGTGGACATGCAACAAATAGGAATTCGTATATTGAGAATGGGAATAGAAGAGAGGCATTTCCTAACATCTTTGAAGCAGGACGTAGTAAGGAAAGTGAGAAATCTTTTACTCATGGTCAGATGGAAAAATTCCATTTATCTTCTAATCCTATGCAAGTTCCACTTAACAAGTTTCATGAACTTCCAGTTTTCTATCTCAATGATAAAAGCAAGGTTCAACAAGATTTGGACAGGCCAGTTAGTGATTTGCAATTATCCAAAAGAAGTTATGAAATGTCCAATACTGGGGATCCTGGTTATCTTTTAGCTTCTCAGACATCTCGTACATATCAAATTGCTCCTTCTTTGGACGTGGGCAAGTCTTGGGCTCACTCCAGTTCATCTTGGGAAAAGTCAAATGGCAACAGCTCCCAAAAGATGGCATCAGGTCATACACAGCCGTGTTTCAAATCGTCTGCTGCTGTTCACAAGAGTTTTCGTTCATCAGCTCAGAACAATGGAATTTTTGGAGATAGATGGCATTTGAGTAGTGACTCTAGATCAAACCCTGAGTCTGGTTGTGAAACTCCTTACCAGAATGGATTCTATTTTGGGTCTACGTCTGGTTCCAATGGGGGAATTCTCTCCTCTAGCGTAAGGCATGACCATGGGGCAAACTACTACAAGGGCTCCGGTTGTATTGGCACGAATTCACCAAAAGACATTAACTTGAATGTAGTGCTCTCAAAAAGCTTATCAAATGAGGCAGGTCAACAACCAAACTACCGGACCAGAGAGGCAGAACAAAACAATGAGGACCATCATAATGTATTACCATGGACAAGGGCTGTACCTGCTAGTAAGAATGAAACTATCAATTCAAGAAGATTCTCTATGACTGCAGAGCTTAATTTTGTTCTCTCACCGAAGAAACAATTTTCTGACAGAAACGAAACTGAAAATGGCAGTAAAGTTATATGTTATCCAAACATCGAGTCTAATTCACATTGTAGTAACATTGAGCCGAGAATGTCTGAACATGGTGAATGCCAGAGTAACCAAAAACTTCTTGGGTTTCCCATTTTTGAAGGGCCACGCATTTCTAAGAATGAGTCATTTTCTCTTACATCCCCATCAGCACCTCCTGCTAATCCATCTGAGAATGAAGTGGAAGATAACCGGAAAACTAGAGTACTTGATATCAATTTGCCTTGTGATCCTTCAGTTTTTGAGTCAGAAAACGTTACTACCGGAGCTCTGGCTGTAGAGAATGGAAAGGACACAAAGATCTCTACTGTGAGAGTTGATATTGATTTGAACTCGTGTGTCAGCGATGATGAACCATCTATGAGACCTCTACCCTTGGCTTCTTCAAGTGGCAAGGAAAAGGTTGTCGTAGAGATAGATTTAGAAGCCCCGGCAATGCCCGAGGCTGAAGATGACATAATTGCAGAAGAAGAATCTTTAGAAAAACAGCATGAACAGCAACCACAATCTCCTCAGCACAAGGCTGTTGATATTCAGGATGATCTTATGGCTTTAGCAGCAGAGGCAATACTTGCCATCTCTTCTTGTGTTCATTCCTGTCATTTGGATGATAGTGTTAGCAATGCGTTGGAAGATTCTTCAAGCGATCCCCTAAATTGGTTTGCTGAGATAGTTTCCACTCACGGAGATGATGTACAGGCCAAGTCTGACATTGTATTGAGATCCAAAGAAGGCAAGGATGCTGAGGAATCCTCTTTGAGAGGGCTTGATTACTTTGAGTACATGACTTTGAGGCTGGCGGAGGTCGGTGAAGAAGACTACATGCCTAAGCCCTTGGTTCCAGAAAATATGGAAATTGAAGATACTGGAACCAATTTGTTGCAAAATCGGCCCCGAAAGGGCCAGACAAGGAGAGGTAGGCAGCGAAGGGACTTCCAGAAGGACATCCTTCCAGGCCTTTCTTCTCTATCAAGGCATGAGGTTACAGAAGATCTTCAGACGTTTGGTGGCCTAATGCGAGCAACGGGCCACTCTTGGCATTCTGGAGTTACAAGGAGGAACTCTACTAGAAATGGTTGTGGAAGAGGAAGACGACGATCTGTGATCAGTCCCCCGCCCCCTGTGCAATCAGCATGTAATCAGCTGATACAGCAACTAAGTAACATTGAAATGGGGCTGGAAGATGGAAGCCTGACTGGTTGGGGCAAGACAACCAGACGGCCCCGTCGGCAAAGATGTCCGGCCGGTAACCCTCCGGCTGTCCCTTTAACTTAA 3132 43.17 VLEFFESEDVGLRNGNKGASGQYYNGILPRATSDAYLGCDRDAVKRTMLEHEAIFKNQVRELHRLYIKQRELMNDIKRSEHRHPIPVDISFSSSPLASQSTPDGARKWHLPSFPLAISSSGPSVPGVEDVKSSLSSLKENNRSDGLLPSQNGTSSKDCEVLESRPSKSRRKTFDLQLPADEYIDSEEGEVFQDEKVPPTLGCHSNGNKKFETQSCVTANLNVNPSEKSGGQSAALRTDSHLWNRHGLADLNEPVQVEEANGSNFFDLPNARDSSNGETQGPIVSSTKQEIFLSSNIKGGHATNRNSYIENGNRREAFPNIFEAGRSKESEKSFTHGQMEKFHLSSNPMQVPLNKFHELPVFYLNDKSKVQQDLDRPVSDLQLSKRSYEMSNTGDPGYLLASQTSRTYQIAPSLDVGKSWAHSSSSWEKSNGNSSQKMASGHTQPCFKSSAAVHKSFRSSAQNNGIFGDRWHLSSDSRSNPESGCETPYQNGFYFGSTSGSNGGILSSSVRHDHGANYYKGSGCIGTNSPKDINLNVVLSKSLSNEAGQQPNYRTREAEQNNEDHHNVLPWTRAVPASKNETINSRRFSMTAELNFVLSPKKQFSDRNETENGSKVICYPNIESNSHCSNIEPRMSEHGECQSNQKLLGFPIFEGPRISKNESFSLTSPSAPPANPSENEVEDNRKTRVLDINLPCDPSVFESENVTTGALAVENGKDTKISTVRVDIDLNSCVSDDEPSMRPLPLASSSGKEKVVVEIDLEAPAMPEAEDDIIAEEESLEKQHEQQPQSPQHKAVDIQDDLMALAAEAILAISSCVHSCHLDDSVSNALEDSSSDPLNWFAEIVSTHGDDVQAKSDIVLRSKEGKDAEESSLRGLDYFEYMTLRLAEVGEEDYMPKPLVPENMEIEDTGTNLLQNRPRKGQTRRGRQRRDFQKDILPGLSSLSRHEVTEDLQTFGGLMRATGHSWHSGVTRRNSTRNGCGRGRRRSVISPPPPVQSACNQLIQQLSNIEMGLEDGSLTGWGKTTRRPRRQRCPAGNPPAVPLT 1043
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 33461479 33467677 - CmPI595203_05g024420.1 Cmu05g2442 417356

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g2442 1043 MobiDBLite consensus disorder prediction 125 159 - -
Cmu05g2442 1043 MobiDBLite consensus disorder prediction 660 683 - -
Cmu05g2442 1043 MobiDBLite consensus disorder prediction 964 994 - -
Cmu05g2442 1043 MobiDBLite consensus disorder prediction 119 169 - -
Cmu05g2442 1043 Pfam Plant protein of unknown function (DUF863) 121 1033 IPR008581 -
Cmu05g2442 1043 PANTHER TRANSCRIPTION FACTOR, PUTATIVE (DUF863)-RELATED 20 1033 - -
Cmu05g2442 1043 MobiDBLite consensus disorder prediction 424 444 - -
Cmu05g2442 1043 MobiDBLite consensus disorder prediction 1013 1043 - -
Cmu05g2442 1043 MobiDBLite consensus disorder prediction 660 676 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g2442 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g2442 Cmu-Chr5:33461479 Cmu08g0969 Cmu-Chr8:21987881 7.40E-175 dispersed
Cmu01g0374 Cmu-Chr1:3939773 Cmu05g2442 Cmu-Chr5:33461479 2.50E-07 transposed
Cmu06g1413 Cmu-Chr6:25330129 Cmu05g2442 Cmu-Chr5:33461479 5.50E-06 transposed
Cmu04g1241 Cmu-Chr4:26900851 Cmu05g2442 Cmu-Chr5:33461479 3.80E-13 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g80 Blo01g00444 . Bda01g02136 . . Bpe10g00891 . Bma15g00139 Cmo04g01769 Cmo18g01141 . Cma18g01120 . Car18g01032 Sed06g1491 Cpe09g00208 Cpe01g01494 Bhi07g01518 Tan04g1031 Cmetu10g0795 Lac13g0357 Hepe10g1779 . . Cla05g02409 Cam05g2586 Cec05g2618 Cco05g2658 Clacu05g2588 Cmu05g2442 Cre05g2559 . . Cone6ag0549 Cone9ag0559 Lsi04g00380 Csa05g02495 Chy10g01043 Cme10g00377 . Blo11g00790 . . . Bpe02g02325 Bma01g00114 . . . . Cma04g01688 . Car04g01725 . . Cpe07g00079 . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001421 1 6 2 3 2 2 3 2 2 2 2 2 3 2 2 3 2 2 3 2 2 2 2 2 2 2 2 8 3 1 74