Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g2442 GTTCTTGAGTTTTTCGAATCGGAGGATGTGGGTTTAAGGAATGGGAACAAAGGTGCAAGTGGTCAATACTATAATGGAATTCTGCCAAGAGCTACCTCCGATGCATATCTAGGTTGTGATAGAGATGCTGTGAAGAGGACAATGCTTGAGCATGAAGCCATATTCAAGAACCAGGTTCGTGAGCTGCATCGGTTATATATAAAACAGAGAGAGTTAATGAATGATATTAAAAGATCAGAGCACAGACACCCGATACCGGTGGACATATCATTCTCATCTAGTCCTCTAGCATCTCAAAGTACTCCTGATGGTGCAAGGAAATGGCATCTCCCAAGCTTTCCTCTTGCAATTTCTTCCAGTGGACCATCTGTACCTGGTGTTGAAGATGTAAAATCATCTTTAAGTTCTTTGAAAGAAAACAATAGAAGTGATGGCCTCTTACCATCCCAAAATGGAACCAGTTCAAAGGACTGTGAGGTACTAGAATCTAGACCCTCAAAGTCTAGGAGGAAAACCTTTGATCTTCAACTTCCAGCAGACGAGTACATTGATAGCGAAGAGGGGGAGGTATTTCAAGATGAAAAAGTGCCTCCCACGTTGGGTTGCCATTCAAATGGTAACAAGAAATTTGAGACTCAGAGTTGTGTGACGGCAAATTTGAATGTGAATCCTAGTGAAAAAAGTGGTGGCCAAAGTGCTGCTTTGAGAACTGACTCACATTTATGGAACAGACATGGTTTGGCTGACTTGAATGAGCCTGTTCAGGTCGAGGAGGCAAATGGGTCCAATTTTTTTGATCTTCCTAATGCTCGTGACTCCAGCAATGGGGAGACTCAAGGCCCCATTGTATCGTCTACGAAGCAAGAAATTTTTCTGAGCTCGAATATTAAAGGTGGACATGCAACAAATAGGAATTCGTATATTGAGAATGGGAATAGAAGAGAGGCATTTCCTAACATCTTTGAAGCAGGACGTAGTAAGGAAAGTGAGAAATCTTTTACTCATGGTCAGATGGAAAAATTCCATTTATCTTCTAATCCTATGCAAGTTCCACTTAACAAGTTTCATGAACTTCCAGTTTTCTATCTCAATGATAAAAGCAAGGTTCAACAAGATTTGGACAGGCCAGTTAGTGATTTGCAATTATCCAAAAGAAGTTATGAAATGTCCAATACTGGGGATCCTGGTTATCTTTTAGCTTCTCAGACATCTCGTACATATCAAATTGCTCCTTCTTTGGACGTGGGCAAGTCTTGGGCTCACTCCAGTTCATCTTGGGAAAAGTCAAATGGCAACAGCTCCCAAAAGATGGCATCAGGTCATACACAGCCGTGTTTCAAATCGTCTGCTGCTGTTCACAAGAGTTTTCGTTCATCAGCTCAGAACAATGGAATTTTTGGAGATAGATGGCATTTGAGTAGTGACTCTAGATCAAACCCTGAGTCTGGTTGTGAAACTCCTTACCAGAATGGATTCTATTTTGGGTCTACGTCTGGTTCCAATGGGGGAATTCTCTCCTCTAGCGTAAGGCATGACCATGGGGCAAACTACTACAAGGGCTCCGGTTGTATTGGCACGAATTCACCAAAAGACATTAACTTGAATGTAGTGCTCTCAAAAAGCTTATCAAATGAGGCAGGTCAACAACCAAACTACCGGACCAGAGAGGCAGAACAAAACAATGAGGACCATCATAATGTATTACCATGGACAAGGGCTGTACCTGCTAGTAAGAATGAAACTATCAATTCAAGAAGATTCTCTATGACTGCAGAGCTTAATTTTGTTCTCTCACCGAAGAAACAATTTTCTGACAGAAACGAAACTGAAAATGGCAGTAAAGTTATATGTTATCCAAACATCGAGTCTAATTCACATTGTAGTAACATTGAGCCGAGAATGTCTGAACATGGTGAATGCCAGAGTAACCAAAAACTTCTTGGGTTTCCCATTTTTGAAGGGCCACGCATTTCTAAGAATGAGTCATTTTCTCTTACATCCCCATCAGCACCTCCTGCTAATCCATCTGAGAATGAAGTGGAAGATAACCGGAAAACTAGAGTACTTGATATCAATTTGCCTTGTGATCCTTCAGTTTTTGAGTCAGAAAACGTTACTACCGGAGCTCTGGCTGTAGAGAATGGAAAGGACACAAAGATCTCTACTGTGAGAGTTGATATTGATTTGAACTCGTGTGTCAGCGATGATGAACCATCTATGAGACCTCTACCCTTGGCTTCTTCAAGTGGCAAGGAAAAGGTTGTCGTAGAGATAGATTTAGAAGCCCCGGCAATGCCCGAGGCTGAAGATGACATAATTGCAGAAGAAGAATCTTTAGAAAAACAGCATGAACAGCAACCACAATCTCCTCAGCACAAGGCTGTTGATATTCAGGATGATCTTATGGCTTTAGCAGCAGAGGCAATACTTGCCATCTCTTCTTGTGTTCATTCCTGTCATTTGGATGATAGTGTTAGCAATGCGTTGGAAGATTCTTCAAGCGATCCCCTAAATTGGTTTGCTGAGATAGTTTCCACTCACGGAGATGATGTACAGGCCAAGTCTGACATTGTATTGAGATCCAAAGAAGGCAAGGATGCTGAGGAATCCTCTTTGAGAGGGCTTGATTACTTTGAGTACATGACTTTGAGGCTGGCGGAGGTCGGTGAAGAAGACTACATGCCTAAGCCCTTGGTTCCAGAAAATATGGAAATTGAAGATACTGGAACCAATTTGTTGCAAAATCGGCCCCGAAAGGGCCAGACAAGGAGAGGTAGGCAGCGAAGGGACTTCCAGAAGGACATCCTTCCAGGCCTTTCTTCTCTATCAAGGCATGAGGTTACAGAAGATCTTCAGACGTTTGGTGGCCTAATGCGAGCAACGGGCCACTCTTGGCATTCTGGAGTTACAAGGAGGAACTCTACTAGAAATGGTTGTGGAAGAGGAAGACGACGATCTGTGATCAGTCCCCCGCCCCCTGTGCAATCAGCATGTAATCAGCTGATACAGCAACTAAGTAACATTGAAATGGGGCTGGAAGATGGAAGCCTGACTGGTTGGGGCAAGACAACCAGACGGCCCCGTCGGCAAAGATGTCCGGCCGGTAACCCTCCGGCTGTCCCTTTAACTTAA 3132 43.17 VLEFFESEDVGLRNGNKGASGQYYNGILPRATSDAYLGCDRDAVKRTMLEHEAIFKNQVRELHRLYIKQRELMNDIKRSEHRHPIPVDISFSSSPLASQSTPDGARKWHLPSFPLAISSSGPSVPGVEDVKSSLSSLKENNRSDGLLPSQNGTSSKDCEVLESRPSKSRRKTFDLQLPADEYIDSEEGEVFQDEKVPPTLGCHSNGNKKFETQSCVTANLNVNPSEKSGGQSAALRTDSHLWNRHGLADLNEPVQVEEANGSNFFDLPNARDSSNGETQGPIVSSTKQEIFLSSNIKGGHATNRNSYIENGNRREAFPNIFEAGRSKESEKSFTHGQMEKFHLSSNPMQVPLNKFHELPVFYLNDKSKVQQDLDRPVSDLQLSKRSYEMSNTGDPGYLLASQTSRTYQIAPSLDVGKSWAHSSSSWEKSNGNSSQKMASGHTQPCFKSSAAVHKSFRSSAQNNGIFGDRWHLSSDSRSNPESGCETPYQNGFYFGSTSGSNGGILSSSVRHDHGANYYKGSGCIGTNSPKDINLNVVLSKSLSNEAGQQPNYRTREAEQNNEDHHNVLPWTRAVPASKNETINSRRFSMTAELNFVLSPKKQFSDRNETENGSKVICYPNIESNSHCSNIEPRMSEHGECQSNQKLLGFPIFEGPRISKNESFSLTSPSAPPANPSENEVEDNRKTRVLDINLPCDPSVFESENVTTGALAVENGKDTKISTVRVDIDLNSCVSDDEPSMRPLPLASSSGKEKVVVEIDLEAPAMPEAEDDIIAEEESLEKQHEQQPQSPQHKAVDIQDDLMALAAEAILAISSCVHSCHLDDSVSNALEDSSSDPLNWFAEIVSTHGDDVQAKSDIVLRSKEGKDAEESSLRGLDYFEYMTLRLAEVGEEDYMPKPLVPENMEIEDTGTNLLQNRPRKGQTRRGRQRRDFQKDILPGLSSLSRHEVTEDLQTFGGLMRATGHSWHSGVTRRNSTRNGCGRGRRRSVISPPPPVQSACNQLIQQLSNIEMGLEDGSLTGWGKTTRRPRRQRCPAGNPPAVPLT 1043
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 33461479 33467677 - CmPI595203_05g024420.1 Cmu05g2442 417356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g2442 1043 MobiDBLite consensus disorder prediction 125 159 - -
Cmu05g2442 1043 MobiDBLite consensus disorder prediction 660 683 - -
Cmu05g2442 1043 MobiDBLite consensus disorder prediction 964 994 - -
Cmu05g2442 1043 MobiDBLite consensus disorder prediction 119 169 - -
Cmu05g2442 1043 Pfam Plant protein of unknown function (DUF863) 121 1033 IPR008581 -
Cmu05g2442 1043 PANTHER TRANSCRIPTION FACTOR, PUTATIVE (DUF863)-RELATED 20 1033 - -
Cmu05g2442 1043 MobiDBLite consensus disorder prediction 424 444 - -
Cmu05g2442 1043 MobiDBLite consensus disorder prediction 1013 1043 - -
Cmu05g2442 1043 MobiDBLite consensus disorder prediction 660 676 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g2442 Cmu-Chr5:33461479 Cmu08g0969 Cmu-Chr8:21987881 7.40E-175 dispersed
Cmu01g0374 Cmu-Chr1:3939773 Cmu05g2442 Cmu-Chr5:33461479 2.50E-07 transposed
Cmu06g1413 Cmu-Chr6:25330129 Cmu05g2442 Cmu-Chr5:33461479 5.50E-06 transposed
Cmu04g1241 Cmu-Chr4:26900851 Cmu05g2442 Cmu-Chr5:33461479 3.80E-13 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g2442 - - - 0.0