Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g2641 ATGATGCATAGCATTTCCATCTGGGTGGTTTCTGTATTCTTGCTGTTGGTTTTGTCTTTCCTACTGCTTATTAAAACAAAGACACACAACAAGAAACTTCCTCCAGGCCCTCCAAAGCTTCCTCTGTTGGGTCACTTGCACCTTATTGGCTCCCTCCCTCATCGCTCATTGTGGAAACTTTCAAGAAAATATGGCCCCATCATGCTCCTAAGACTCGGTTCTGTTCCAACCATCGTAATTTCCTCTGCTGCTGCCGCCAGAGAGGTGTTACAAGTGCATGATCTTGTTTGTTGTAGTCGACCTCTCTTAGCCGCTAGTGCAAGATTTTCATACAACTTCTTAGACATAGGTTTATCTCCATATACTGATCATTGGAGAGAAGTTCGTAAGATTTCTGTTCTTGAGCTCTTCAACGCTCGGCGAGTGCAGTCGTTTCACTTGATCAGAGAAGAAGTCAGTCTGCTGTTAAAGACAATCGCTCAAGCTTCATCTCTTGCAATTCCAGTTGATCTGAGTGAGGAATCATATACTCTCACTGCAAATATGATCACACGCATAGCTTTTGGGAAGAGGTTTGGAGGGGGTGAACTAGATAATGGAAATTTTCAGCAGCTTATCCGTAGAGCAATAGCAGCATTAGGAAGCTTCTCCATGACTGACTTCTTTCCTAGTGTGGGTTGGATTATTGATCGACTCAGTGGCGTTAACGGGAGGCTGGAGAAGAGCTTTGCTGAGCTGGATGCTTTTTTCCGACAAGTAGTCGAAGGGACTTCTCAGAATGAAGAAAATATTGTCGATGTTTTGTTGGAAATGGAGAGAGATCACTCTGAACTTGATGATGCCTTACAACTAACTAGAGATTGCATCAAGGCAATTATCATGGATATATTTATAGCTGGAGTGAACCCTGGAGCAGGCACCATTATTTGGGTAATGGCAGAGCTAGTTAAGAATCCAAAGGTAACGAAGAAACTACAACATGAGATCAGAAGCTACATAAAAGAAGATCTGGTAAAGGAGAACGACCTTGAAAAACTTCAATATCTAAAAATGGTGGTGAAAGAGGTTCTAAGGTTACATCCGCCTGCCCCACTTCTACTCCCAAGAGAAACCATGACTCATTTTAAGCTCAAGGGTTACGATATTGATCCCAAAACTCATCTTCATATCAATGTATGGGCGATCGGGCGAGATCCAAATTATTGGACTTGTCCAGAAGAATTCTTACCCGAGAGATTTATGGGAAGCAATATTGATTACAAAGGGCAGAATTTCGAGTTATTACCATTTGGAGCTGGTCGAAGAATATGTCCTGGTATGAACATGGGGATTGTCACGATGGAGTTGGCTTTGGCTAATCTATTGCTACAATTTAACTGGAAATTGCCAGATGGGATGAAAGAAGAAGATATGGACATGGAAGAGGATGCTGGTCTAACCATTGCAAAGAAATCACCTCTTAAACTCATCCCAATTGCTTATAGACCTTAA 1491 42.12 MMHSISIWVVSVFLLLVLSFLLLIKTKTHNKKLPPGPPKLPLLGHLHLIGSLPHRSLWKLSRKYGPIMLLRLGSVPTIVISSAAAAREVLQVHDLVCCSRPLLAASARFSYNFLDIGLSPYTDHWREVRKISVLELFNARRVQSFHLIREEVSLLLKTIAQASSLAIPVDLSEESYTLTANMITRIAFGKRFGGGELDNGNFQQLIRRAIAALGSFSMTDFFPSVGWIIDRLSGVNGRLEKSFAELDAFFRQVVEGTSQNEENIVDVLLEMERDHSELDDALQLTRDCIKAIIMDIFIAGVNPGAGTIIWVMAELVKNPKVTKKLQHEIRSYIKEDLVKENDLEKLQYLKMVVKEVLRLHPPAPLLLPRETMTHFKLKGYDIDPKTHLHINVWAIGRDPNYWTCPEEFLPERFMGSNIDYKGQNFELLPFGAGRRICPGMNMGIVTMELALANLLLQFNWKLPDGMKEEDMDMEEDAGLTIAKKSPLKLIPIAYRP 496
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 35021372 35023196 - CmPI595203_05g026410.1 Cmu05g2641 417555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g2641 496 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2641 496 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2641 496 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2641 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cmu05g2641 496 Gene3D Cytochrome P450 22 490 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2641 496 FunFam Cytochrome P450 83B1 21 490 - -
Cmu05g2641 496 CDD CYP71-like 63 487 - -
Cmu05g2641 496 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2641 496 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2641 496 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2641 496 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2641 496 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2641 496 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2641 496 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2641 496 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2641 496 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2641 496 PANTHER CYTOCHROME P450 71B11-RELATED 9 492 IPR050193 -
Cmu05g2641 496 SUPERFAMILY Cytochrome P450 34 491 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2641 496 Pfam Cytochrome P450 34 481 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g2641 Cmu-Chr5:35021372 Cmu05g2645 Cmu-Chr5:35037409 1.40E-195 dispersed
Cmu05g2641 Cmu-Chr5:35021372 Cmu05g2642 Cmu-Chr5:35025710 1.90E-197 tandem
Cmu10g2380 Cmu-Chr10:30224754 Cmu05g2641 Cmu-Chr5:35021372 1.60E-82 transposed
Cmu10g2668 Cmu-Chr10:33479830 Cmu05g2641 Cmu-Chr5:35021372 9.00E-81 transposed
Cmu05g2641 Cmu-Chr5:35021372 Cmu06g1790 Cmu-Chr6:28906888 4.80E-108 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g2641 - - - 0.0