Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g2642 ATGATGATTTTGTTCATATGGATTCCATCTCTAATCTTCCTCTTGTCTTCTCTACTACTGTTTGTTAAAACAAAGACACACGAAAACAACAAGAAGATTTCCCTTCCTCCTCCAATCCCTCCAAAGCTTCCTTTCTTGGGTCATTTGCACCTCATTATTGCCTCTCTTCCCCATCGCTCTTTTCATAAGCTTTCAAAAAAATACGGTCCTGTAATGCTCCTTAAACTCGGCTCTGTTCCAACCATCATAGTCTCCTCCGCATCCGCTGCAAGACAACTATTCAAACTTCACGATCTTGCTTCTTGTAGCCGACCGCCTTTATCCGGTACTCGAAGATTGTCATACAACTATCTCGACATAAGCTTCTCTCCATATGGTCATCACTGGAGGGAAGTTCGAAAAATTTGTGTTCTTGAGTTGTTCAGTGCTAAACGAGTGCAGTCATTTCAAGGGATAAGAGAACAAGAGGTGGGTTTGTTGTTAAATTCCATCTCTCATTTTGCATCTACTGCCACTCCTGTTGATTTGAGTCAGAAATCGTATTCAATCACTGCCAATATAATAACTCGGATTGCTTTTGGGAAGAGCTTTCGAGGGGGTGAATTAGATAATGAGAATTTTCAATCAGTGGTTCGTAGAGCATTAGCGGTATTGGGAAGTTTCTCTGCCACTGATTTTTTTCCTAATGTTGGTTGGATTATTGATTGGGTTATTGGTGTTCGTGGAAGATTTGAAAAGAGCTTTGCTGAGTTGGATGCTTTTTTTCAACATGTAATTGATGATCGAATCAATAACTTTGTTGGGACAAGTTCGCAAAATGAAGGAAATGTTATTGTTGATGTTTTGTTGAAGATTGAGAGAGAACAATCTGAATTTGATTCTCTGCAGCTCACTACGGATTGCATCAAGGCACTTATCATGGACATATTTCTAGCCGGAGTTGACACAGGTGCAAGTGTCATTGTTTGGGCAATGGCAGAGCTAACTAAGAATCCAAAGGTGATGAAAAAGTTACAAGATGAAATTAGATACGCCATAAAAGAAGATCAAGTGAAAGAAAGTGAACTCGAAAAACTTGAATACCTTAAAATGGTGGTAAAAGAAGTTCTAAGATTACATGTGCCAGCCCCACTTCTCCTTCCTAGACAAACCATGTCACATTTCAAGCTTGATGGTTACGATATTGACCCCAAATCTCATCTCTATGTCAATGCTTGGGCAATTGCGCGAGACCCAAATTATTGGTTTAACCCAGAAGAATTCTTGCCGGAGAGATTTATGGGAAGTAATATAGATTACAGAGGACAAAATTTTGAGTTATTGCCGTTCGGAGCTGGTCGAAGAAGTTGTCCAGGGATGAACATGGCAATCGCTACGGTGGAGCTCACGTTGGCTAATTTATTGCTTCGTTTTGATTGGAAATTACCAGATGGAATGAAAGAAGATGACGTGAACATGGAAGAAGATGCTGGGCTAACTGTTACTAAGAAATCACCTCTTAAACTTGTTCCAATCAACTTCTCCAGAGTTTAG 1533 39.92 MMILFIWIPSLIFLLSSLLLFVKTKTHENNKKISLPPPIPPKLPFLGHLHLIIASLPHRSFHKLSKKYGPVMLLKLGSVPTIIVSSASAARQLFKLHDLASCSRPPLSGTRRLSYNYLDISFSPYGHHWREVRKICVLELFSAKRVQSFQGIREQEVGLLLNSISHFASTATPVDLSQKSYSITANIITRIAFGKSFRGGELDNENFQSVVRRALAVLGSFSATDFFPNVGWIIDWVIGVRGRFEKSFAELDAFFQHVIDDRINNFVGTSSQNEGNVIVDVLLKIEREQSEFDSLQLTTDCIKALIMDIFLAGVDTGASVIVWAMAELTKNPKVMKKLQDEIRYAIKEDQVKESELEKLEYLKMVVKEVLRLHVPAPLLLPRQTMSHFKLDGYDIDPKSHLYVNAWAIARDPNYWFNPEEFLPERFMGSNIDYRGQNFELLPFGAGRRSCPGMNMAIATVELTLANLLLRFDWKLPDGMKEDDVNMEEDAGLTVTKKSPLKLVPINFSRV 510
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 35025710 35027734 - CmPI595203_05g026420.1 Cmu05g2642 417556
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g2642 510 SUPERFAMILY Cytochrome P450 37 504 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2642 510 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2642 510 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2642 510 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2642 510 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2642 510 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2642 510 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2642 510 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2642 510 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2642 510 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2642 510 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2642 510 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2642 510 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2642 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cmu05g2642 510 Gene3D Cytochrome P450 20 504 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2642 510 PANTHER CYTOCHROME P450 71B11-RELATED 13 505 IPR050193 -
Cmu05g2642 510 CDD CYP71-like 67 500 - -
Cmu05g2642 510 Pfam Cytochrome P450 37 496 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2642 510 FunFam Cytochrome P450 83B1 21 503 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g2642 Cmu-Chr5:35025710 Cmu05g2648 Cmu-Chr5:35084216 1.70E-201 dispersed
Cmu05g2641 Cmu-Chr5:35021372 Cmu05g2642 Cmu-Chr5:35025710 1.90E-197 tandem
Cmu05g2642 Cmu-Chr5:35025710 Cmu05g2643 Cmu-Chr5:35031067 9.20E-44 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g2642 - - - 0.0