Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmu05g2642 | ATGATGATTTTGTTCATATGGATTCCATCTCTAATCTTCCTCTTGTCTTCTCTACTACTGTTTGTTAAAACAAAGACACACGAAAACAACAAGAAGATTTCCCTTCCTCCTCCAATCCCTCCAAAGCTTCCTTTCTTGGGTCATTTGCACCTCATTATTGCCTCTCTTCCCCATCGCTCTTTTCATAAGCTTTCAAAAAAATACGGTCCTGTAATGCTCCTTAAACTCGGCTCTGTTCCAACCATCATAGTCTCCTCCGCATCCGCTGCAAGACAACTATTCAAACTTCACGATCTTGCTTCTTGTAGCCGACCGCCTTTATCCGGTACTCGAAGATTGTCATACAACTATCTCGACATAAGCTTCTCTCCATATGGTCATCACTGGAGGGAAGTTCGAAAAATTTGTGTTCTTGAGTTGTTCAGTGCTAAACGAGTGCAGTCATTTCAAGGGATAAGAGAACAAGAGGTGGGTTTGTTGTTAAATTCCATCTCTCATTTTGCATCTACTGCCACTCCTGTTGATTTGAGTCAGAAATCGTATTCAATCACTGCCAATATAATAACTCGGATTGCTTTTGGGAAGAGCTTTCGAGGGGGTGAATTAGATAATGAGAATTTTCAATCAGTGGTTCGTAGAGCATTAGCGGTATTGGGAAGTTTCTCTGCCACTGATTTTTTTCCTAATGTTGGTTGGATTATTGATTGGGTTATTGGTGTTCGTGGAAGATTTGAAAAGAGCTTTGCTGAGTTGGATGCTTTTTTTCAACATGTAATTGATGATCGAATCAATAACTTTGTTGGGACAAGTTCGCAAAATGAAGGAAATGTTATTGTTGATGTTTTGTTGAAGATTGAGAGAGAACAATCTGAATTTGATTCTCTGCAGCTCACTACGGATTGCATCAAGGCACTTATCATGGACATATTTCTAGCCGGAGTTGACACAGGTGCAAGTGTCATTGTTTGGGCAATGGCAGAGCTAACTAAGAATCCAAAGGTGATGAAAAAGTTACAAGATGAAATTAGATACGCCATAAAAGAAGATCAAGTGAAAGAAAGTGAACTCGAAAAACTTGAATACCTTAAAATGGTGGTAAAAGAAGTTCTAAGATTACATGTGCCAGCCCCACTTCTCCTTCCTAGACAAACCATGTCACATTTCAAGCTTGATGGTTACGATATTGACCCCAAATCTCATCTCTATGTCAATGCTTGGGCAATTGCGCGAGACCCAAATTATTGGTTTAACCCAGAAGAATTCTTGCCGGAGAGATTTATGGGAAGTAATATAGATTACAGAGGACAAAATTTTGAGTTATTGCCGTTCGGAGCTGGTCGAAGAAGTTGTCCAGGGATGAACATGGCAATCGCTACGGTGGAGCTCACGTTGGCTAATTTATTGCTTCGTTTTGATTGGAAATTACCAGATGGAATGAAAGAAGATGACGTGAACATGGAAGAAGATGCTGGGCTAACTGTTACTAAGAAATCACCTCTTAAACTTGTTCCAATCAACTTCTCCAGAGTTTAG | 1533 | 39.92 | MMILFIWIPSLIFLLSSLLLFVKTKTHENNKKISLPPPIPPKLPFLGHLHLIIASLPHRSFHKLSKKYGPVMLLKLGSVPTIIVSSASAARQLFKLHDLASCSRPPLSGTRRLSYNYLDISFSPYGHHWREVRKICVLELFSAKRVQSFQGIREQEVGLLLNSISHFASTATPVDLSQKSYSITANIITRIAFGKSFRGGELDNENFQSVVRRALAVLGSFSATDFFPNVGWIIDWVIGVRGRFEKSFAELDAFFQHVIDDRINNFVGTSSQNEGNVIVDVLLKIEREQSEFDSLQLTTDCIKALIMDIFLAGVDTGASVIVWAMAELTKNPKVMKKLQDEIRYAIKEDQVKESELEKLEYLKMVVKEVLRLHVPAPLLLPRQTMSHFKLDGYDIDPKSHLYVNAWAIARDPNYWFNPEEFLPERFMGSNIDYRGQNFELLPFGAGRRSCPGMNMAIATVELTLANLLLRFDWKLPDGMKEDDVNMEEDAGLTVTKKSPLKLVPINFSRV | 510 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 35025710 | 35027734 | - | CmPI595203_05g026420.1 | Cmu05g2642 | 417556 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmu05g2642 | 510 | SUPERFAMILY | Cytochrome P450 | 37 | 504 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g2642 | 510 | PRINTS | E-class P450 group I signature | 301 | 318 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g2642 | 510 | PRINTS | E-class P450 group I signature | 183 | 201 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g2642 | 510 | PRINTS | E-class P450 group I signature | 321 | 347 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g2642 | 510 | PRINTS | E-class P450 group I signature | 404 | 428 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g2642 | 510 | PRINTS | E-class P450 group I signature | 440 | 450 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g2642 | 510 | PRINTS | E-class P450 group I signature | 65 | 84 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g2642 | 510 | PRINTS | E-class P450 group I signature | 450 | 473 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g2642 | 510 | PRINTS | E-class P450 group I signature | 363 | 381 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g2642 | 510 | PRINTS | P450 superfamily signature | 312 | 329 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g2642 | 510 | PRINTS | P450 superfamily signature | 441 | 450 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g2642 | 510 | PRINTS | P450 superfamily signature | 450 | 461 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g2642 | 510 | PRINTS | P450 superfamily signature | 364 | 375 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g2642 | 510 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 443 | 452 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cmu05g2642 | 510 | Gene3D | Cytochrome P450 | 20 | 504 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g2642 | 510 | PANTHER | CYTOCHROME P450 71B11-RELATED | 13 | 505 | IPR050193 | - | |
| Cmu05g2642 | 510 | CDD | CYP71-like | 67 | 500 | - | - | |
| Cmu05g2642 | 510 | Pfam | Cytochrome P450 | 37 | 496 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g2642 | 510 | FunFam | Cytochrome P450 83B1 | 21 | 503 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmu05g2642 | Cmu-Chr5:35025710 | Cmu05g2648 | Cmu-Chr5:35084216 | 1.70E-201 | dispersed | |
| Cmu05g2641 | Cmu-Chr5:35021372 | Cmu05g2642 | Cmu-Chr5:35025710 | 1.90E-197 | tandem | |
| Cmu05g2642 | Cmu-Chr5:35025710 | Cmu05g2643 | Cmu-Chr5:35031067 | 9.20E-44 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmu05g2642 | - | - | - | 0.0 |