Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g2645 ATGCATTATTTCATTTGGGTTCCTCTTCTTTTTCTGTTAATTCCTCTATTTCTTCTCATAACCAAAAAGCTTCTTCACAACAACGAGAAGAAGGTGGTTAACGTTCCTCCTCCAAGCCCTCCAAAGCTTCCATTTTTGGGTCATTTACACCTCCTTGGCTCTCACCCACATCGCTCTTTATGGAACCTTTCAAAAAAACACGGCCCCATCATGCTCCTCAAACTCGGCTGTGTTCCTACCGTCATCATATCTTCAGCAGCCGTCGCAAGAGGGCTATTCAAACACCACGATCTTGCTTCTTGCAGCCGCCCTCGCTTAACAGGCAGTGGAAGATTTTCATACAACTTTCAAGACCTGAATTTATCCCCATATGGTGAGCGTTGGAGAGAGCTTCGAAAGATTTTTATACTTGAACTCTTCAGCACCAAGCGAGTACAATCATTTCAACATATTAGAGAAGAGGAAGTGGGTAAGCTATTAAAGATCATATCTAATTCCGCATCTCTTGGAACTCCAATTGATTTGAGTCAAACCATATATACTCTTACTGCAAATATAACCTTCCGAATTGCTTTCGGTAAAAGCTTTAGTGGGGGAGAATTAGATAATGAGAATTTTCAACACATCATTCGTAGAGCAATGGTTGCATTAGGAAGCTTCTCGGCGACTGATTTCTTTCCTGGTGTGGGTTGGATTATTGATCGGCTGAGTGGTGTTCATGGGATATTGGAGAAGAGCTTTGCTGAAGTGGATGCCATTTTTCAACAGGTAGTTGATGATCGCATCAAATTCTTGGAAATTTCTCGAAATGAAGAAAATATTGTTGATGTTTTGTTGAGAATGGAGAGAGACAGCTCAAAATTTGATGCAGTGAAATTTACCCAAGATCGTGTTAAGGCACTTATCATGGATATCTTTCTAGCAGGAGTGGAAACAGGAGCAAATACCATTATTTGGACAATGACAGAGCTTATGAGAAACCCAAGGGTAATGAAAAATCTACAAGACCAAATCAGAAGTTGCATAAAGGAAGATCAAGTGAAAGAGATCAATCTTGAAAAGCTTCCATATCTAAAAATGGTAGTGAAAGAAGTTTTGAGGTTGCATCCACCAGCCCCACTTCTAGTTCCAAGAGAAACCATGTCTCATTTTAAGCTCAATGGTTATGATATTCATCCCAAGACTCATCTTCACGTCAATGTATGGGCCATTGGTCGAGACCCAGAGTCTTGGACTAACCCTGAAGAGTTTTTTCCAGAGAGATATGTGGGAAGTAATATTGATTATAAAGGACAAAACTTTGAATTATTACCTTTTGGAGCTGGTCGAAGAGTTTGTCCTGGGATGAATATGGGAATCTTTACAATAGAGTTGACATTGGCTAATTTGTTATTGTGTTTTGATTGGAAATTGCCCGATGGAATGAAAGAAGAAGATGTAGACATGGAAGAAGATGTTGGTATTACTGTTGCCAAAAAATCACTTCTTAAACTTATTCCCGTCCCTTACTTAAAGTAG 1518 39.59 MHYFIWVPLLFLLIPLFLLITKKLLHNNEKKVVNVPPPSPPKLPFLGHLHLLGSHPHRSLWNLSKKHGPIMLLKLGCVPTVIISSAAVARGLFKHHDLASCSRPRLTGSGRFSYNFQDLNLSPYGERWRELRKIFILELFSTKRVQSFQHIREEEVGKLLKIISNSASLGTPIDLSQTIYTLTANITFRIAFGKSFSGGELDNENFQHIIRRAMVALGSFSATDFFPGVGWIIDRLSGVHGILEKSFAEVDAIFQQVVDDRIKFLEISRNEENIVDVLLRMERDSSKFDAVKFTQDRVKALIMDIFLAGVETGANTIIWTMTELMRNPRVMKNLQDQIRSCIKEDQVKEINLEKLPYLKMVVKEVLRLHPPAPLLVPRETMSHFKLNGYDIHPKTHLHVNVWAIGRDPESWTNPEEFFPERYVGSNIDYKGQNFELLPFGAGRRVCPGMNMGIFTIELTLANLLLCFDWKLPDGMKEEDVDMEEDVGITVAKKSLLKLIPVPYLK 505
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 35037409 35046522 - CmPI595203_05g026450.1 Cmu05g2645 417559
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g2645 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cmu05g2645 505 SUPERFAMILY Cytochrome P450 37 499 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2645 505 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2645 505 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2645 505 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2645 505 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2645 505 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2645 505 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2645 505 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2645 505 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2645 505 Pfam Cytochrome P450 37 490 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2645 505 FunFam Cytochrome P450 83B1 22 499 - -
Cmu05g2645 505 PANTHER CYTOCHROME P450 71B11-RELATED 14 501 IPR050193 -
Cmu05g2645 505 CDD CYP71-like 66 496 - -
Cmu05g2645 505 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2645 505 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2645 505 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g2645 505 Gene3D Cytochrome P450 22 499 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g2641 Cmu-Chr5:35021372 Cmu05g2645 Cmu-Chr5:35037409 1.40E-195 dispersed
Cmu05g2643 Cmu-Chr5:35031067 Cmu05g2645 Cmu-Chr5:35037409 6.80E-55 dispersed
Cmu05g2645 Cmu-Chr5:35037409 Cmu05g2647 Cmu-Chr5:35069192 2.10E-207 dispersed
Cmu05g2644 Cmu-Chr5:35032644 Cmu05g2645 Cmu-Chr5:35037409 1.30E-100 tandem
Cmu05g2645 Cmu-Chr5:35037409 Cmu05g2646 Cmu-Chr5:35057038 1.20E-218 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g2645 - - - 0.0