Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g2713 ATGGCCACTCCCCTTTTCCGGTCGTCGGTTTTCTTGGCTGTTTTTGTTTCTCAGGTGGTCTTCTCCGCCTCCGCCTCCGCCTCATCCTGGACAGTCAAATATCTGCCTGGATTCTCAGGTCCTCTTCCGTTTGAACTTGAAACTGGGTATGTGGGAGTGGGGGATTCGGAGGAAGTTCAGTTGTTTTATTACTTTGTCAAATCCCAAGGAAATCCCCAAACCGATCCTCTAATGACTTGGTTGGCCGGCGGCCCTGGTTGCTCTGCTTTCTCTGGTCTCGCCTTTGAAATTGGTCCTATAAATTTCAAGGTAGAGCCATACAATGGAACCGTACCTCAACTAATCTTGAATCCTGATGCATGGACTAAGAAAGCTAGTATTCTATTTATAGATTCGCCTGTTGGCACTGGATTTTCATATAGTCGAACTCTACGAGGCTCCAAAAGAGGAGATTTTTTACAAGTAGAACAAATTCATCAATTTTTAAGGAAGTGGCTTGCAAACCACCCAGAATTTATATCTAATCCATTTTACGTTGGTGGAGACTCTTACTCTGGTATGATTGTTCCACCTGTTACTCAAGCAATCTCAGAAGGAAACAAACACGAAGTCCCACTTATAAACCTCCAGGGATACATCGTGGGAAATCCAGTCAGCGTACGTAAAACAAATGATAATTCTAGGATTCCTTATGCTTATAGATTGACGCTCATCTCTACAGAATTGTATGAGTCATTAACAAATAGTTGCAAAGGAGAATATGAAAATGTTGATCCAAATAACGAGGAGTGCGTCAATCATGTATCAAACTTCAAAAAGTGTGTGGGTAGAATCAATTATTGGTGTATTTCTTGCCCTTATTGTGAGGATGTATCTTCGGCGCCACAAGATAAGTTTGGACGGCGAAGATCTCTCTACAACACCTCCCAGGAACTGCTTCTTGCTACCAGAGTGTTACCTCCTCCTTCTCTTGACTGTCAAGAGTATAAGTACTACCTTAGTTACTATTGGGCAAACGATGACCAAGTTCGAAAAGCACTTCACATACGTGAGGGAACTATTGAAGAATGGATAAGATGCCAGAATCGTAAAAGTTACGAATATGATATTATGAGTGTTGTTCCTTATCATGCGAATCTTAGTTTTAAAGGTTATCGATCTTTGGTTTTTAGTGGGGATCATGATCTGATGGTGCCAGTCATAGACACTGAAGCATGGTTAAGGTCGCTAAGTTATCCTATTGTGGATGATTGGAGACCTTGGTTTAACACGGAAGATCAAATACTTGGATACACAAGAACATATGCAAATAACATGACATTTGCGACCATTAAAGGTGGAGGGCACACACCAGAATTCATGCAAACTCAAAGTCGCGTAATGTTTTATAGATGGATACAAGGAGAATCTTTATGA 1416 41.31 MATPLFRSSVFLAVFVSQVVFSASASASSWTVKYLPGFSGPLPFELETGYVGVGDSEEVQLFYYFVKSQGNPQTDPLMTWLAGGPGCSAFSGLAFEIGPINFKVEPYNGTVPQLILNPDAWTKKASILFIDSPVGTGFSYSRTLRGSKRGDFLQVEQIHQFLRKWLANHPEFISNPFYVGGDSYSGMIVPPVTQAISEGNKHEVPLINLQGYIVGNPVSVRKTNDNSRIPYAYRLTLISTELYESLTNSCKGEYENVDPNNEECVNHVSNFKKCVGRINYWCISCPYCEDVSSAPQDKFGRRRSLYNTSQELLLATRVLPPPSLDCQEYKYYLSYYWANDDQVRKALHIREGTIEEWIRCQNRKSYEYDIMSVVPYHANLSFKGYRSLVFSGDHDLMVPVIDTEAWLRSLSYPIVDDWRPWFNTEDQILGYTRTYANNMTFATIKGGGHTPEFMQTQSRVMFYRWIQGESL 471
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 35599539 35603193 + CmPI595203_05g027130.1 Cmu05g2713 417627
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g2713 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 130 140 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cmu05g2713 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 117 129 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cmu05g2713 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 190 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cmu05g2713 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 439 452 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cmu05g2713 471 SUPERFAMILY alpha/beta-Hydrolases 31 469 IPR029058 -
Cmu05g2713 471 Gene3D alpha/beta hydrolase 25 299 IPR029058 -
Cmu05g2713 471 FunFam Carboxypeptidase 325 470 - -
Cmu05g2713 471 FunFam Serine carboxypeptidase-like 11 26 471 - -
Cmu05g2713 471 Gene3D - 324 471 - -
Cmu05g2713 471 Pfam Serine carboxypeptidase 36 468 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cmu05g2713 471 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 28 465 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)|GO:0016747(PANTHER)|GO:0019748(PANTHER)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu04g0397 Cmu-Chr4:12658395 Cmu05g2713 Cmu-Chr5:35599539 4.60E-154 dispersed
Cmu05g2713 Cmu-Chr5:35599539 Cmu09g0757 Cmu-Chr9:7197529 1.40E-93 dispersed
Cmu05g2713 Cmu-Chr5:35599539 Cmu05g2714 Cmu-Chr5:35606322 8.50E-163 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g2713 K16296 - csv:101210918 540.036