Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu05g2713 | ATGGCCACTCCCCTTTTCCGGTCGTCGGTTTTCTTGGCTGTTTTTGTTTCTCAGGTGGTCTTCTCCGCCTCCGCCTCCGCCTCATCCTGGACAGTCAAATATCTGCCTGGATTCTCAGGTCCTCTTCCGTTTGAACTTGAAACTGGGTATGTGGGAGTGGGGGATTCGGAGGAAGTTCAGTTGTTTTATTACTTTGTCAAATCCCAAGGAAATCCCCAAACCGATCCTCTAATGACTTGGTTGGCCGGCGGCCCTGGTTGCTCTGCTTTCTCTGGTCTCGCCTTTGAAATTGGTCCTATAAATTTCAAGGTAGAGCCATACAATGGAACCGTACCTCAACTAATCTTGAATCCTGATGCATGGACTAAGAAAGCTAGTATTCTATTTATAGATTCGCCTGTTGGCACTGGATTTTCATATAGTCGAACTCTACGAGGCTCCAAAAGAGGAGATTTTTTACAAGTAGAACAAATTCATCAATTTTTAAGGAAGTGGCTTGCAAACCACCCAGAATTTATATCTAATCCATTTTACGTTGGTGGAGACTCTTACTCTGGTATGATTGTTCCACCTGTTACTCAAGCAATCTCAGAAGGAAACAAACACGAAGTCCCACTTATAAACCTCCAGGGATACATCGTGGGAAATCCAGTCAGCGTACGTAAAACAAATGATAATTCTAGGATTCCTTATGCTTATAGATTGACGCTCATCTCTACAGAATTGTATGAGTCATTAACAAATAGTTGCAAAGGAGAATATGAAAATGTTGATCCAAATAACGAGGAGTGCGTCAATCATGTATCAAACTTCAAAAAGTGTGTGGGTAGAATCAATTATTGGTGTATTTCTTGCCCTTATTGTGAGGATGTATCTTCGGCGCCACAAGATAAGTTTGGACGGCGAAGATCTCTCTACAACACCTCCCAGGAACTGCTTCTTGCTACCAGAGTGTTACCTCCTCCTTCTCTTGACTGTCAAGAGTATAAGTACTACCTTAGTTACTATTGGGCAAACGATGACCAAGTTCGAAAAGCACTTCACATACGTGAGGGAACTATTGAAGAATGGATAAGATGCCAGAATCGTAAAAGTTACGAATATGATATTATGAGTGTTGTTCCTTATCATGCGAATCTTAGTTTTAAAGGTTATCGATCTTTGGTTTTTAGTGGGGATCATGATCTGATGGTGCCAGTCATAGACACTGAAGCATGGTTAAGGTCGCTAAGTTATCCTATTGTGGATGATTGGAGACCTTGGTTTAACACGGAAGATCAAATACTTGGATACACAAGAACATATGCAAATAACATGACATTTGCGACCATTAAAGGTGGAGGGCACACACCAGAATTCATGCAAACTCAAAGTCGCGTAATGTTTTATAGATGGATACAAGGAGAATCTTTATGA | 1416 | 41.31 | MATPLFRSSVFLAVFVSQVVFSASASASSWTVKYLPGFSGPLPFELETGYVGVGDSEEVQLFYYFVKSQGNPQTDPLMTWLAGGPGCSAFSGLAFEIGPINFKVEPYNGTVPQLILNPDAWTKKASILFIDSPVGTGFSYSRTLRGSKRGDFLQVEQIHQFLRKWLANHPEFISNPFYVGGDSYSGMIVPPVTQAISEGNKHEVPLINLQGYIVGNPVSVRKTNDNSRIPYAYRLTLISTELYESLTNSCKGEYENVDPNNEECVNHVSNFKKCVGRINYWCISCPYCEDVSSAPQDKFGRRRSLYNTSQELLLATRVLPPPSLDCQEYKYYLSYYWANDDQVRKALHIREGTIEEWIRCQNRKSYEYDIMSVVPYHANLSFKGYRSLVFSGDHDLMVPVIDTEAWLRSLSYPIVDDWRPWFNTEDQILGYTRTYANNMTFATIKGGGHTPEFMQTQSRVMFYRWIQGESL | 471 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 35599539 | 35603193 | + | CmPI595203_05g027130.1 | Cmu05g2713 | 417627 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu05g2713 | 471 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 130 | 140 | IPR001563 | GO:0004185(InterPro)|GO:0006508(InterPro) | |
Cmu05g2713 | 471 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 117 | 129 | IPR001563 | GO:0004185(InterPro)|GO:0006508(InterPro) | |
Cmu05g2713 | 471 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 165 | 190 | IPR001563 | GO:0004185(InterPro)|GO:0006508(InterPro) | |
Cmu05g2713 | 471 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 439 | 452 | IPR001563 | GO:0004185(InterPro)|GO:0006508(InterPro) | |
Cmu05g2713 | 471 | SUPERFAMILY | alpha/beta-Hydrolases | 31 | 469 | IPR029058 | - | |
Cmu05g2713 | 471 | Gene3D | alpha/beta hydrolase | 25 | 299 | IPR029058 | - | |
Cmu05g2713 | 471 | FunFam | Carboxypeptidase | 325 | 470 | - | - | |
Cmu05g2713 | 471 | FunFam | Serine carboxypeptidase-like 11 | 26 | 471 | - | - | |
Cmu05g2713 | 471 | Gene3D | - | 324 | 471 | - | - | |
Cmu05g2713 | 471 | Pfam | Serine carboxypeptidase | 36 | 468 | IPR001563 | GO:0004185(InterPro)|GO:0006508(InterPro) | |
Cmu05g2713 | 471 | PANTHER | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE | 28 | 465 | IPR001563 | GO:0004185(InterPro)|GO:0006508(InterPro)|GO:0016747(PANTHER)|GO:0019748(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu04g0397 | Cmu-Chr4:12658395 | Cmu05g2713 | Cmu-Chr5:35599539 | 4.60E-154 | dispersed | |
Cmu05g2713 | Cmu-Chr5:35599539 | Cmu09g0757 | Cmu-Chr9:7197529 | 1.40E-93 | dispersed | |
Cmu05g2713 | Cmu-Chr5:35599539 | Cmu05g2714 | Cmu-Chr5:35606322 | 8.50E-163 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu05g2713 | K16296 | - | csv:101210918 | 540.036 |