Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g2714 ATGGCCACCTTCGCCACCGTCCTTTTCCGATGCTCTGTTTTCCTCCTCCTACTTTTTCAGCTCTTCTCCGCCGCTGCCGCCACCGGAGGATCATACTCGAGGGTGAAGTATCTGCCGGGATTCTCAGGACCTCTTCCCTTCCAACTAGAAACTGGATACGTTGGTGTGGGAGATTCAGATCAATTTCAGATTTTTCACTATTTTATCAAATCTGAAGCAAATCCCAAAACGGATCCTCTCATTATTTGGCTTACCGGAGGTCCCGGTTGCTCTGCCCTCTCCGGACTTGCCTTTGAAATTGGTCCTATAAGTTTTGATGAAGAATCAAACGAAGGGAGCATTCCTCGATTAATCTTAAATCCCTATTCATGGACGAAGAAATGTAGCATAATATTTGTAGATTTACCTGCGGGGACTGGATTTTCATATGATACAACTTCGTCTACCTTTAAACCGGGAGATTTTAATCAAATTCACCACTATCTTCAATTCTTGAGAAAGTGGTTTGTTGATCATCCAGAGTTTACAACAAATCCATTCTATATTGGTGGAGATTCATACTCTGGGATGATTGTTCCGGTAGTTGCTCAAAAAATTGTAGAAGGAAATACACATGATTTTTCATTTATAAATTTTCAGGGCTATATATTGGGAAATCCTTACACTATTCGTGATTCAGGTGACAATTTTGCAATTTCTTTTGCTCATAGGATGACTCTTATATCTGATGAATTATTTGAGTCATTGAAAACTAGTTGTAAAGGAAAATATGTGAACATTGATCCAAGCAATGTGGAGTGTTTAAGACATTACGAGACGTATAAAAAGTGTATATCGAAAGTCGAGCCTGCAAATATTTTGGATCCGAAGTGTCAATTTCAGTCTCCAAAGCAACAAGATGTACATGATCGAAGATCTCTCAATAGCATCTCAAAGTCGTTGTTTGATCAAAGCACACCACTCTCCTTTCGTAGTAGTTGTCCTGAGTTTAAATACAAACTTTCTAATGATTGGGCTAACGCGGAACAAGTTCGGAAGGCACTTCACATTCGTGAGGGAAGTATTGGAGAATGGATAAGATGTAAGAACAAAAAAGAAATGTATAATTTTGAACTCGATACTGTTTTCCCTTATCATGTGAACCTTAGTTCTAAAGGATATCGATCTTTGATCTATAGTGGCGATCATGATATGTTAGTGCCCCATTTGGACACTCAGGCATGGATCAAAGCTTTAAACTACTCCATTGTTGATGATTGGAGACCATGGTTTATCTTGGATCAAGTAGCCGGATATACCCGATACTATGCAAATAAGATAACATTTGCAACTATAAAAGGTGGAGGGCACACAGCAGAATACACAAAAAGAGAATGCAGCATAATGTTTAGCAGATGGATATCAGGACAATCCTTATGA 1419 39.04 MATFATVLFRCSVFLLLLFQLFSAAAATGGSYSRVKYLPGFSGPLPFQLETGYVGVGDSDQFQIFHYFIKSEANPKTDPLIIWLTGGPGCSALSGLAFEIGPISFDEESNEGSIPRLILNPYSWTKKCSIIFVDLPAGTGFSYDTTSSTFKPGDFNQIHHYLQFLRKWFVDHPEFTTNPFYIGGDSYSGMIVPVVAQKIVEGNTHDFSFINFQGYILGNPYTIRDSGDNFAISFAHRMTLISDELFESLKTSCKGKYVNIDPSNVECLRHYETYKKCISKVEPANILDPKCQFQSPKQQDVHDRRSLNSISKSLFDQSTPLSFRSSCPEFKYKLSNDWANAEQVRKALHIREGSIGEWIRCKNKKEMYNFELDTVFPYHVNLSSKGYRSLIYSGDHDMLVPHLDTQAWIKALNYSIVDDWRPWFILDQVAGYTRYYANKITFATIKGGGHTAEYTKRECSIMFSRWISGQSL 472
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 35606322 35609096 + CmPI595203_05g027140.1 Cmu05g2714 417628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g2714 472 Gene3D alpha/beta hydrolase 30 302 IPR029058 -
Cmu05g2714 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 133 143 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cmu05g2714 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 440 453 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cmu05g2714 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 193 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cmu05g2714 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 120 132 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cmu05g2714 472 FunFam Carboxypeptidase 326 471 - -
Cmu05g2714 472 FunFam Serine carboxypeptidase-like 11 29 472 - -
Cmu05g2714 472 SUPERFAMILY alpha/beta-Hydrolases 35 471 IPR029058 -
Cmu05g2714 472 Gene3D - 326 472 - -
Cmu05g2714 472 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 33 466 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)|GO:0016747(PANTHER)|GO:0019748(PANTHER)
Cmu05g2714 472 Pfam Serine carboxypeptidase 39 469 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g2128 Cmu-Chr5:30762808 Cmu05g2714 Cmu-Chr5:35606322 2.20E-184 dispersed
Cmu05g2129 Cmu-Chr5:30777488 Cmu05g2714 Cmu-Chr5:35606322 6.50E-181 dispersed
Cmu05g2130 Cmu-Chr5:30787331 Cmu05g2714 Cmu-Chr5:35606322 3.30E-10 dispersed
Cmu05g2714 Cmu-Chr5:35606322 Cmu09g0757 Cmu-Chr9:7197529 9.90E-95 dispersed
Cmu05g2713 Cmu-Chr5:35599539 Cmu05g2714 Cmu-Chr5:35606322 8.50E-163 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g2714 K16296 - csv:101207623 600.127