Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu06g0062 ATGGCCTACCGACCCAACCATTCCCCTAACGCTTTTTTCAATCATTATTCTCCCCAGGCCTCCGCCATGAAAATAAAGCAGAGAAAAGCTCCACAAATTCCCCTTCTTCCAATCAAAAAACAGAAAAGGATGCTGAACCAACCTGGACAATGGGTGGTGCTGGTGGCGGCAATATGGATTCAGGCATTTGCAGGCACAAATTTTGATTTCCCCTCTTATTCTTCCGATCTGAAGGCGGCTCTGGGGATGTCGCAGGTGGAGCTCAACTATCTGGCGGTGGCTTCCGACCTTGGCAAGGCCTTCGGGTGGTGCTCTGGCGTCGCTCTCTTATATTTTCCTTTGTGGGTGGTGATGTTCATGGCTGCTTCCATGGGGTTTCTTGGCTATGGCCTCCAATGGCTTCTCCTTCAAAGGATTGTCTATCTGCCTTACTCTATGGTTTATCTTCTCTGCTTGATGGCTGGATGTAGTATTTGCTGGTTCAACACGGTCTGCTATGTCTCATGTATCCAAAATTTTCCAGCCAACCGTGCCCTTGCATTGTCCTTGATTGTCAGCTTTAATGGCGTCAGTGCAGCTCTATACACCCTAATTGCCAATGCAGTAGACCCCAATGATGCCGGTTTGTACCTCTTCCTAAATGCACTGGTTCCTCTCATCATCTCTATCGTTGCCCTCCTCCCAATCCTTCATCAGCCATCAGTTCAACCATCCTCTGCTGATGCCATCCGCCATGACTCTCTCATCTTCATATGCTTATACATCACGGCCGTTATCACAGGGGTGTACTTAATCACCTTCAATTCCAAGCCTTCCTACAAATACAGGTCCCAAATTCTGTTAGCAGGGGCTCTTGCCCTTTTACTAGTTCCTCTTTGTTTGCCAGGAATTCTTAGTACACGCAGGTGGTTGGCTCGGATCATATCCACCAGCTTGAGCCGTCTTATTCACTCTAGATTTAACCTTGTTGATCATGAGCTTCACCAGGAGCTCATTGCTGTTGGAACAGAACGAAATGGTATGAAGGTCATCATCCCTTTTGATTCTAAAGAGAAGGAAAGCACTTCGAGGAAGGTGATGGAGAAAGAGAACTTGGTAATGCTTGAAGAAGAGCATTCGGCTAAGATGCTGTTGCGACGGTTGGACTTTTGGCTCTATTATGTTGCATACTTTTGTGGTGGTACGATTGGGTTGGTTTACAGCAACAATCTTGGACAAATTGCACAGTCGCTTGGATATAGTTCGTCAACAAGTTCACTTGTAACACTCTACTCTTCTTGCTCCTTCTTTGGGCGGTTAATCTCAGCAGCCCCAGATTTCATGCGTGAAAAGGTGCGTTTCGCCAGAACAGGGTGGCTAGCCATTGCACTGGTGCCAACTCCAATCGCCTTCATTTTACTCGCTGCATCAGGCAGCAAAATCGCATTACAAGCTGGCACTGGCTTGATCGGCCTAAGCTCGGGATTCATATTTTCAGCCTCAGTCTCAATCACATCAGAGTTATTCGGACCGAACAGTTCAGGGGTCAACCACAACATCCTCATAACTAACATCCCTCTTGGCTCGTTCCTCTACGGCGTCCTGGCGGCAGTGGCGTACGATTCAAACGCCGAAAGTTCACACCAGATGGCGGCGCTGGGGGACGCGGTAGTGTGCATCGGCCAGAATTGCTATCTGCAGACGTTCGTATGGTGGGCTTGCATCTCCATCTTCGGCCTGGCTTCTAGCTTCTTGCTTTTCCGACGGACGAGACCGGCTTACGACCGCCATTACGAGAGTAACCTAAGCAAGATGCAGCCATTTTAG 1806 48.45 MAYRPNHSPNAFFNHYSPQASAMKIKQRKAPQIPLLPIKKQKRMLNQPGQWVVLVAAIWIQAFAGTNFDFPSYSSDLKAALGMSQVELNYLAVASDLGKAFGWCSGVALLYFPLWVVMFMAASMGFLGYGLQWLLLQRIVYLPYSMVYLLCLMAGCSICWFNTVCYVSCIQNFPANRALALSLIVSFNGVSAALYTLIANAVDPNDAGLYLFLNALVPLIISIVALLPILHQPSVQPSSADAIRHDSLIFICLYITAVITGVYLITFNSKPSYKYRSQILLAGALALLLVPLCLPGILSTRRWLARIISTSLSRLIHSRFNLVDHELHQELIAVGTERNGMKVIIPFDSKEKESTSRKVMEKENLVMLEEEHSAKMLLRRLDFWLYYVAYFCGGTIGLVYSNNLGQIAQSLGYSSSTSSLVTLYSSCSFFGRLISAAPDFMREKVRFARTGWLAIALVPTPIAFILLAASGSKIALQAGTGLIGLSSGFIFSASVSITSELFGPNSSGVNHNILITNIPLGSFLYGVLAAVAYDSNAESSHQMAALGDAVVCIGQNCYLQTFVWWACISIFGLASSFLLFRRTRPAYDRHYESNLSKMQPF 601
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 585633 588543 + CmPI595203_06g000620.1 Cmu06g0062 417722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu06g0062 601 Pfam Nodulin-like 50 295 IPR010658 -
Cmu06g0062 601 Gene3D MFS general substrate transporter like domains 255 574 IPR036259 -
Cmu06g0062 601 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 50 589 - GO:0016020(PANTHER)
Cmu06g0062 601 SUPERFAMILY MFS general substrate transporter 256 586 IPR036259 -
Cmu06g0062 601 SUPERFAMILY MFS general substrate transporter 17 230 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g0645 Cmu-Chr3:691667 Cmu06g0062 Cmu-Chr6:585633 1.20E-72 dispersed
Cmu06g0062 Cmu-Chr6:585633 Cmu07g1108 Cmu-Chr7:26147221 4.00E-173 dispersed
Cmu06g0062 Cmu-Chr6:585633 Cmu02g1181 Cmu-Chr2:24473580 1.50E-66 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu06g0062 - - - 0.0