Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu06g0068 | ATGGCTACTTTAAACTTAGGCTCTGCTTCTCACTTTGTTGACCAGCTTCAGCAACGCCCTGATCTCCACCTAGAATCTCCCCCAACTTCTGACCATGTCAACCACTTCAACGGCAGCGGCGGCTCCGGCGGTAGCGGCGATGTCATGGTCCGTCGCCCACGGGGTCGCCCGGCCGGCTCCAAGAACAAGCCCAAGCCACCCGTGATCATCACGCGCGAGAGCGCCAACACACTCCGAGCTCATATCTTGGAGGTCGGTGGTGGATGCGACGTCTTCGAGGCGGTGGCCGGCTATGCTCGACGGCGACAACGGGGGATCTGTGTGTTGAGTGGGAGTGGGATTGTGAATAATGTTAGCTTGCGACAACCGGCGGCTGCTGGATCGGTGTTGACGTTGCAAGGGAGGTTCGAGATTTTGTCGTTGTCGGGATCGTTCCTACCGCCGCCTGCTCCGCCAGGTGCTACCAGTCTTACAATTTTCTTGGCCGGAGGACAAGGGCAAGTGGTGGGAGGGAATGTGGTGGGAGCTTTGATCGCGTCGGGGCCGGTCATCGTCATAGCATCGTCATTTAGTAACGTTGCATACGAGAGGTTGCCGTTGGATGAAGAAGAATTGCCGATGCAGGTGGGTGGAGGCGATGGTGACGGAGGCGACGGTGGCGGTGACGGTCACAACAACCCTTTTCCTGATGCATCTTCGGGTTTGCCGTTTCTAAATCTGCCTATGAACATGCCAAATCAGAATCAATTTTTCGGTTGA | 759 | 56.52 | MATLNLGSASHFVDQLQQRPDLHLESPPTSDHVNHFNGSGGSGGSGDVMVRRPRGRPAGSKNKPKPPVIITRESANTLRAHILEVGGGCDVFEAVAGYARRRQRGICVLSGSGIVNNVSLRQPAAAGSVLTLQGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGNVVGALIASGPVIVIASSFSNVAYERLPLDEEELPMQVGGGDGDGGDGGGDGHNNPFPDASSGLPFLNLPMNMPNQNQFFG | 252 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 641386 | 642490 | + | CmPI595203_06g000680.1 | Cmu06g0068 | 417728 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu06g0068 | 252 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 75 | 209 | - | - | |
Cmu06g0068 | 252 | Gene3D | - | 78 | 209 | - | - | |
Cmu06g0068 | 252 | MobiDBLite | consensus disorder prediction | 205 | 232 | - | - | |
Cmu06g0068 | 252 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 38 | 215 | IPR014476 | GO:0003680(PANTHER)|GO:0003680(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Cmu06g0068 | 252 | CDD | DUF296 | 79 | 162 | IPR005175 | - | |
Cmu06g0068 | 252 | FunFam | AT-hook motif nuclear-localized protein | 78 | 205 | - | - | |
Cmu06g0068 | 252 | ProSiteProfiles | PPC domain profile profile. | 75 | 211 | IPR005175 | - | |
Cmu06g0068 | 252 | MobiDBLite | consensus disorder prediction | 22 | 68 | - | - | |
Cmu06g0068 | 252 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 79 | 191 | IPR005175 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu06g0068 | Cmu-Chr6:641386 | Cmu10g1022 | Cmu-Chr10:2183337 | 4.50E-78 | dispersed | |
Cmu05g0282 | Cmu-Chr5:2403443 | Cmu06g0068 | Cmu-Chr6:641386 | 4.40E-89 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu06g0068 | - | - | - | 0.0 |