Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu06g0102 ATGATGATGAGAGAGAGAAGAAGTTGTGTTGTTGTATCCCTTGTGGGTATAGCATTATTGATGAGTTTATCCATTGTGAGAGGTGAAAATACATTACAATCACCAGTTAAGCTGGTATGGCATTACTACAAGCTCAACGCAACTTGCCCTTATGCTGAGGAATACATAAAGCATCAAGTCAAGTTGTTTTGGGACAAGGATAAGAGCATTGCTGCCAAGTTCCTTCGTTTGCTCTCTGCAGATTGCCTTTCCAAAAACGGTTGTGACGGCTCAATACTTCTTGACGGTCCAAATTCAGAGAAAAATGCACCACAAAACCAAGGCCTTGGAGGGTTTGAAGAGATTGACAAGATCAAAATTGTACTCGAAGAAAGATGTCCGGGTGTTGTTTCTTGTACAGACATTTTAAACCTAGCCACTAGAGATGCTGCCCATTTGGCAGGTGCACCATCTTATCCAGTTTTTACTGGGAGGAGGGATGGTTTTACAAGTAGTATTGATGCAGTGGATTTACCATCTCCCTCCATATCATGGCAAGAAGGACTTAATTATTTTCAATCTAAAGGTCTTGATGTTTTGGACATGACAACACTCCTAGGTGCACATTCAATGGGAAAAACACACTGTCGATACATCATGGATAGGCTATACAATTTCAAAGGCACAAAAAAACCCGATCCATCAATGGACAAATCATTGTTAAAACAGCTTCAAAAGAAATGCCCCAAAAATTCAAAAACAGACCCAACAGTGAATCTAACACCAAAATCTGGAAATGACTATCAATTCACAAGTCTTTACTACTCGAGAATTCTTTCGAAAAAGGCGGTCCTCGGTCTCGATCAACAGCTTCTTTTCGGTAACGACACAAATGAAATTGTCCAGGAATTTGCTCCAGAATCTGGATTTGAAGACTTTCGTCGGTCCTTTGCTTTGTCTATGAGTAGGATGGGAAATATCAAGGTTTTGACTGGAAAAGATGGCGAGATTCGACGACATTGTCGCCGAAGAAACTAG 1017 40.61 MMMRERRSCVVVSLVGIALLMSLSIVRGENTLQSPVKLVWHYYKLNATCPYAEEYIKHQVKLFWDKDKSIAAKFLRLLSADCLSKNGCDGSILLDGPNSEKNAPQNQGLGGFEEIDKIKIVLEERCPGVVSCTDILNLATRDAAHLAGAPSYPVFTGRRDGFTSSIDAVDLPSPSISWQEGLNYFQSKGLDVLDMTTLLGAHSMGKTHCRYIMDRLYNFKGTKKPDPSMDKSLLKQLQKKCPKNSKTDPTVNLTPKSGNDYQFTSLYYSRILSKKAVLGLDQQLLFGNDTNEIVQEFAPESGFEDFRRSFALSMSRMGNIKVLTGKDGEIRRHCRRRN 338
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 951599 956001 + CmPI595203_06g001020.1 Cmu06g0102 417762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu06g0102 338 PRINTS Haem peroxidase superfamily signature 130 147 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu06g0102 338 PRINTS Haem peroxidase superfamily signature 148 160 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu06g0102 338 PRINTS Haem peroxidase superfamily signature 71 85 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu06g0102 338 PRINTS Haem peroxidase superfamily signature 194 209 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu06g0102 338 Gene3D - 42 338 - -
Cmu06g0102 338 PANTHER PEROXIDASE 25-RELATED 41 334 IPR000823 GO:0004601(InterPro)|GO:0004601(PANTHER)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Cmu06g0102 338 FunFam Peroxidase 172 317 - -
Cmu06g0102 338 CDD secretory_peroxidase 37 336 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cmu06g0102 338 ProSitePatterns Peroxidases proximal heme-ligand signature. 194 204 IPR019793 -
Cmu06g0102 338 Gene3D Peroxidase, domain 2 172 317 - -
Cmu06g0102 338 ProSiteProfiles Plant heme peroxidase family profile. 37 338 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu06g0102 338 PRINTS Plant peroxidase signature 49 68 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu06g0102 338 PRINTS Plant peroxidase signature 270 287 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu06g0102 338 PRINTS Plant peroxidase signature 312 325 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu06g0102 338 PRINTS Plant peroxidase signature 110 123 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu06g0102 338 PRINTS Plant peroxidase signature 129 139 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu06g0102 338 PRINTS Plant peroxidase signature 193 205 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu06g0102 338 PRINTS Plant peroxidase signature 148 163 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu06g0102 338 Pfam Peroxidase 57 298 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu06g0102 338 SUPERFAMILY Heme-dependent peroxidases 44 338 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu06g0102 Cmu-Chr6:951599 Cmu09g2162 Cmu-Chr9:37740576 1.80E-53 dispersed
Cmu06g0102 Cmu-Chr6:951599 Cmu01g1615 Cmu-Chr1:29853203 6.30E-51 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu06g0102 K00430 - csv:101213667 585.489