Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu06g0153 ATGGAGACCACCACCTATTTTCCATTTTTAGTTACATTCTTGGCTTTGCTTTCCATTTTCTTGTTCCAAAAAACAAAAAACAGAACAAAAAAGAATCTCCCTCCCACTCCTCTGGCTCTCCCAATCCTTGGCCATCTTCATCTCCTCAAACACCCAATCCACAGAACTCTCCACTCTCTCGCCCAAAAATACGGCCCAATCTTCACTCTCCGTCTCGGCGCTCGTCTCGTCGTCGTCGTCTCCTCCACATCCGCCGTCGAAGAATGCTTCACAACAAACGACATCGTTTTCGCAAACCGACCCGAATTCGTCTCCGGCAAGTACCTCAGCTACGGTAACAGCACGCTTGGGGCAGCCCCATATGGCGATCATTGGCGCAATTTACGGCGGTTGAGCGCAACGGAAGTCTTGTCGTCGATCCGGTTGAACGTGTCAGCAGGAATCCGAAAGGAAGAGATCGAGATTTTGCTTAGGAAATTGTACAGAGTTTCGAGAACAGAGTTTGGGAAAGTGAAGTTGAAATCATTGTTCTCGGAGTTGACATTCAATATGATAATGAGAATGGTGGCTGGAAAAAGGTATTATGGGGAAGAAGTGAGTGAATTGGAAGAGGCGAAAAAGTTCAGAGAAATAATGGAGAAGTCGTTCCAATTGGGATCATATCCAGGGGATTTCTTGCCATTCTTGAAATGGGTTGATTGGCAATACACAAAAAGAGTGGAAAGTCTTGGAAGAGATACGGATTCGTTCTTGCAAAATTTGGTGGATGAACATCGAAGAAATGAAGAGGAAGGGAAAAAGGGGAATACAATGATTAGCCATCTCCTCTGTTTGCAGAAAACTCAGCCCGACTATTACACTGATGAAATTATTAAAGGCCTCATCGTTACAATTTTGTCAGCAGCAACGGAGACATCATCAGTGACAATAGAATGGGCAATGTCAAATCTCCTAAACCATCCAGAATCATTAAACAAAGTGAAGAATGAATTGGACACAAAAATAGGGGAAGACCGGATTCTAGATGAAGAAGATATCTCAAATTTACCATATCTTCAAAATGTAATTTCAGAGACACTACGCCTTTATCCAGCAGCTCCACTCTTAGCTCCACATTTATCATCACAAAATTGTTGTTTAGGAGGATACAACATTCCAGCTGACACAATCTTAATGGTCAATGCATGGGCTGTTCAAAGAGATCCCAAAGTTTGGGAAGATTCAACAAGCTTTAAACCTGAGAGGTTTGAAAGTGAAGGAGGAGCTACCAATAATGGTTATAAATTCTTGCCATTTGGATTGGGAAGAAGGGCTTGTCCTGGGATGGGAATGGCTAACCGTGTGGTGGGCTTGACTTTGGGTTCGTTGATTCAGGGGTTTGAGTGGAAGAGAGTGAGTGAAAAGGAGATTGATATGACTGAAGGTCAAGGGATTTCTATGCCTAAAGTTGAGCCATTGGAGGCATTGTGTAGAGCTCGTCCCATCATCAACAAGCTTGCATTAGATTAA 1509 43.27 METTTYFPFLVTFLALLSIFLFQKTKNRTKKNLPPTPLALPILGHLHLLKHPIHRTLHSLAQKYGPIFTLRLGARLVVVVSSTSAVEECFTTNDIVFANRPEFVSGKYLSYGNSTLGAAPYGDHWRNLRRLSATEVLSSIRLNVSAGIRKEEIEILLRKLYRVSRTEFGKVKLKSLFSELTFNMIMRMVAGKRYYGEEVSELEEAKKFREIMEKSFQLGSYPGDFLPFLKWVDWQYTKRVESLGRDTDSFLQNLVDEHRRNEEEGKKGNTMISHLLCLQKTQPDYYTDEIIKGLIVTILSAATETSSVTIEWAMSNLLNHPESLNKVKNELDTKIGEDRILDEEDISNLPYLQNVISETLRLYPAAPLLAPHLSSQNCCLGGYNIPADTILMVNAWAVQRDPKVWEDSTSFKPERFESEGGATNNGYKFLPFGLGRRACPGMGMANRVVGLTLGSLIQGFEWKRVSEKEIDMTEGQGISMPKVEPLEALCRARPIINKLALD 502
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1560602 1562919 - CmPI595203_06g001530.1 Cmu06g0153 417813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu06g0153 502 CDD CYP81 65 486 - -
Cmu06g0153 502 PANTHER CYTOCHROME P450 82C3-RELATED 12 493 IPR050651 -
Cmu06g0153 502 Pfam Cytochrome P450 34 482 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu06g0153 502 FunFam Cytochrome P450 family protein 24 496 - -
Cmu06g0153 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cmu06g0153 502 Gene3D Cytochrome P450 19 491 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu06g0153 502 SUPERFAMILY Cytochrome P450 34 493 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu06g0153 502 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu06g0153 502 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu06g0153 502 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu06g0153 502 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu06g0153 502 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu06g0153 502 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu06g0153 502 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu06g0153 502 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu06g0153 502 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu06g0153 502 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu06g0153 502 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu06g0153 502 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g0355 Cmu-Chr1:3733650 Cmu06g0153 Cmu-Chr6:1560602 1.10E-23 dispersed
Cmu02g0837 Cmu-Chr2:9923555 Cmu06g0153 Cmu-Chr6:1560602 1.50E-146 dispersed
Cmu02g0845 Cmu-Chr2:10149831 Cmu06g0153 Cmu-Chr6:1560602 8.80E-150 dispersed
Cmu02g0846 Cmu-Chr2:10171542 Cmu06g0153 Cmu-Chr6:1560602 3.50E-146 dispersed
Cmu05g2096 Cmu-Chr5:30542249 Cmu06g0153 Cmu-Chr6:1560602 4.70E-45 dispersed
Cmu06g0151 Cmu-Chr6:1548788 Cmu06g0153 Cmu-Chr6:1560602 3.60E-167 dispersed
Cmu06g0153 Cmu-Chr6:1560602 Cmu11g1549 Cmu-Chr11:27788483 4.20E-136 dispersed
Cmu09g1639 Cmu-Chr9:31433120 Cmu06g0153 Cmu-Chr6:1560602 5.10E-52 dispersed
Cmu06g0152 Cmu-Chr6:1553580 Cmu06g0153 Cmu-Chr6:1560602 1.70E-47 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu06g0153 K13260 - cmo:103498908 876.315