Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu06g0203 ATGGAACCCTATCGTCCTCAGGGAAAATATTCCATCACAACCAGTTCCACTACCAATCTTCCTCTCTACCGCTCTGCTCCTCCTCTTGAAGTCAAGCTCGAAGATTTCGAGCTTTATGCTATAGATCGTCTTCGAGTTCTTAAAGGGATTTCTGATGGTTTATCTCGAGGAAAGAAATCTGAAGAAATGGAGAAACTGGTTAGAGAATTGTGGAATACCAATATGAAACATCCACAGGCATCTGAGGATGTGAACAAGGATATAATCTCTCACTTTGTTTTGCGCCTTGTATACTGCAGAACGGAGGAGTTGAGAAAATGGTTTCTTTCTATGGAAACTATGCTATTCCGACACCGTTTTCTTTATGCAAGTTCTGAATCTCAGAAGCAGGTCTTTGTGGAGCTTGGTCTCCCATACAAAGCAATCAGTTATGCAGAATTTGAGGCTGTAAAGGACAAATTGGTTCAAGTTGCTCGGTTGATTGGTCAGACTGTACCAAGTGGTGCTATATACTATAAGGTACCATGGGAAGAAGTTCCAGAGCTAGTGGCTGGTCGAAGAATATTTCTCCATAAAGGATATGCATATATTGCTATGTATCAGGTGGTTTCCCTTGCTGCAACACAATTCTGCAGTTACCTATCAAAGGCCCTAAGTCTGACAAACAGGAAATGGACATCTACAATAAGAGAACAAGAGAAAGATAGGTTGACCCCAATAGTAGAAGCCCTTTGCACGAGCTACCTGGGTCCTGACTACTCACAGCCAAGAGAGTATGGTGATATATCAATAAAAGACCTTGACCAAATAGCTAAAAGTTCATTTCCTCTTTGCATGCGACACCTATTTGAAAAGCTGAAAGAAGATCATCATTTGAAGCATGGAGGGAGGATGCAGTTAGGTCTCTTTCTCAAGGGTGTTGGTTTGAAGCTTGATGATGCCCTGGCTTTCTGGAAAGCTGAGTTCTCCCAGAGAGTTGGTGCTGAGAGGTTTGACAAAGAATATGCATACAGTATCAGGCATAATTATGGAAAAGAAGGCAAGAGAGTGGATTATTCGCCTTATTCCTGTCAAAAAATAATCTCATCATCACCTAGTGTTGGAGATCATCATGGATGTCCCTACAGACATTTCAGTGAAGACAACTTAAGAGCAGCTCTTGGTAAAATGGGAGTAAATAACAGGACAATGGACGATATAATGGACAAAGTGCGAAATAGACATTATCAGTTGGCATGCACCTTGACATTTGAATCGATCCATGGCTCGTTGTGTGATGCTGGGATTAATCATCCAAACCAGTACTTCATTGATAGTCAGAAGGTCCTTCAATCTAAGTTTACATACCAAAGCCTACCTACTGCAGATTCGGCTACACATACTCGGTTGTTGTGTCTCTCATGCAAAGTTGTCAACAAAGCATACAATTCAAAGTTGAAACTTAATACCTGCACTGCACTGCACTTGTTATTTGCAGAACAATTCAACAGTCTAGTAAAACACGTTCAAGCACCTCAAATGGGAATCTACTTGGGATTCTCCAGTAGATTGAATATTGCTCTCATGTTGTTAGCATTGCTATCATCAAGAGGCAGCCTAATGAACATGAATATTTCCAAGATTGTTCCAGTTTGA 1635 40.98 MEPYRPQGKYSITTSSTTNLPLYRSAPPLEVKLEDFELYAIDRLRVLKGISDGLSRGKKSEEMEKLVRELWNTNMKHPQASEDVNKDIISHFVLRLVYCRTEELRKWFLSMETMLFRHRFLYASSESQKQVFVELGLPYKAISYAEFEAVKDKLVQVARLIGQTVPSGAIYYKVPWEEVPELVAGRRIFLHKGYAYIAMYQVVSLAATQFCSYLSKALSLTNRKWTSTIREQEKDRLTPIVEALCTSYLGPDYSQPREYGDISIKDLDQIAKSSFPLCMRHLFEKLKEDHHLKHGGRMQLGLFLKGVGLKLDDALAFWKAEFSQRVGAERFDKEYAYSIRHNYGKEGKRVDYSPYSCQKIISSSPSVGDHHGCPYRHFSEDNLRAALGKMGVNNRTMDDIMDKVRNRHYQLACTLTFESIHGSLCDAGINHPNQYFIDSQKVLQSKFTYQSLPTADSATHTRLLCLSCKVVNKAYNSKLKLNTCTALHLLFAEQFNSLVKHVQAPQMGIYLGFSSRLNIALMLLALLSSRGSLMNMNISKIVPV 544
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2140238 2151670 + CmPI595203_06g002030.1 Cmu06g0203 417863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu06g0203 544 PANTHER DNA PRIMASE LARGE SUBUNIT 15 450 IPR007238 GO:0005658(PANTHER)|GO:0006269(InterPro)|GO:0006269(PANTHER)|GO:0006270(PANTHER)
Cmu06g0203 544 FunFam DNA primase large subunit 5 244 - -
Cmu06g0203 544 Gene3D - 5 244 - -
Cmu06g0203 544 Pfam Eukaryotic and archaeal DNA primase, large subunit 171 436 IPR007238 GO:0006269(InterPro)
Cmu06g0203 544 PIRSF DNA_primase_large 3 462 IPR016558 -
Cmu06g0203 544 CDD PriL_PriS_Eukaryotic 22 439 IPR016558 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu06g0203 K02685 - csv:101217274 823.157