Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu06g0268 | ATGGGGAAGAAAGGAGGTAGCTCATGGTTGACTGCCGTCAAAAGGGCTTTCAGATCTCCCACTAAAGATGATGATGAAAAGAGAAGAGAGAAACGCCGCTGGATTTTCAGAAAACCAACAAATCAGCCGCCGGAGCCACTCGCCGCCCACCAACCGCCGTCTAAGCCCCCGGCTCTCTCCACTCATTCTGTAGCTTTAGAAGACCAGAAACATGCCCTTGCAGTGGCTGAAGCTGCCATGGTCGCCGCCAGAGCGGCTGCACAAGCCGTCCACCTCACCCGCCCTGCCCGTCCTGGATTGGATCGCCATCGCCTCGCCGCCATTGTGATTCAAACTGCCTTTAGAGGATATCTGGCAAGGAGGGCTCTACGGGCATTGAAGGGGTTGGTGAAGTTGCAGGCATTAGTGAGAGGACACAATGTGAGGAAGCAAGCAAAGACGACGCTGCAGTGTATGAAAGCATTAGTAAGAGTGCAGGAAAAAGTTCTCGATCACCGGATGCGACTTTCCCTCGAGGGTAGCCGACGGTCTACATTCAGCGACACCAACAGCGTGTATGAATCTCGCTATGCTCAAGACGTCTCCGAGAGGAAGACTATTAAGTGTGTATCAAGAGAAGGAAGCAGCATTACGGAGGATTGGGATGAACGTGCTCACACAGTTGAAGAAGTAAAAGCAATGTTACAATATAGAAGAGATGCTGCTTTGAATCGTGACAACATTTTATCTCATTCCTTTTCTCAACAGATATGGAGGACTGGAAAGAGCCCATCAATAGGAAATCAAGCGGAGCTTGAAGAAGGACAAAAATGGCTCGACCAATGGATGGCGAAGAAGCCATGGGAGAATAGAGCAAGAGCTTCCACAGATAACAGACCACAGCCCCTTAAAACGCTCGAAATCGACACCTCTAGGCCCTACTCCTACTTATCTCCCAACAATCTCCACACAACGAATTATCAAACGCAATCACAAAGATCGAACTCGCTTTCCTCATCCTCCCCACTCCACAGAGCCCATCACCATCAGTTCTCCATCACCCCTTCCCCATCAAAATCTCGACCAGTCCAGCAAGTTCGGTCGGCGAGTCCCCGCTACAGCAGAGAAGATAGAAACCAAATCAGCCACCACATTACATCCCAAACACCAAGCTTGAGGACAAAACATCAACATCACAAATGGGGTAGTGGTGGTGGGACTTCAATGCCAAATTACATGGCAGCAACAGAGTCAGCCAAGGCACGAGTCCGGTCGCAAAGTGCGCCGAGGCAAAGGCCAGCAACACCCGAGAGGGAACGAGTTGGAACTGCGAGGAAGCGGCTATCTTTTCCAGTACCGCCGGATCCTTACGGTAGAATAGCAGGGTGCGGTGTTTATGGGAATAGCATGAAGAGCCCAAGTTTTAAGAGTGCTTGTGGAAGGTATGGTGGGTTGGAGGAACAGTCTAACTATTCTTCTTGCTATACAGAAAGCCATGGAGGAGAGGTTTCACCATCTTCAACCACTGACCTCAGAAGGTGGCTGAGATGA | 1530 | 50.33 | MGKKGGSSWLTAVKRAFRSPTKDDDEKRREKRRWIFRKPTNQPPEPLAAHQPPSKPPALSTHSVALEDQKHALAVAEAAMVAARAAAQAVHLTRPARPGLDRHRLAAIVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKTTLQCMKALVRVQEKVLDHRMRLSLEGSRRSTFSDTNSVYESRYAQDVSERKTIKCVSREGSSITEDWDERAHTVEEVKAMLQYRRDAALNRDNILSHSFSQQIWRTGKSPSIGNQAELEEGQKWLDQWMAKKPWENRARASTDNRPQPLKTLEIDTSRPYSYLSPNNLHTTNYQTQSQRSNSLSSSSPLHRAHHHQFSITPSPSKSRPVQQVRSASPRYSREDRNQISHHITSQTPSLRTKHQHHKWGSGGGTSMPNYMAATESAKARVRSQSAPRQRPATPERERVGTARKRLSFPVPPDPYGRIAGCGVYGNSMKSPSFKSACGRYGGLEEQSNYSSCYTESHGGEVSPSSTTDLRRWLR | 509 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 3055150 | 3057457 | + | CmPI595203_06g002680.1 | Cmu06g0268 | 417928 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu06g0268 | 509 | MobiDBLite | consensus disorder prediction | 283 | 446 | - | - | |
Cmu06g0268 | 509 | SMART | iq_5 | 102 | 124 | IPR000048 | GO:0005515(InterPro) | |
Cmu06g0268 | 509 | SMART | iq_5 | 125 | 146 | IPR000048 | GO:0005515(InterPro) | |
Cmu06g0268 | 509 | MobiDBLite | consensus disorder prediction | 484 | 509 | - | - | |
Cmu06g0268 | 509 | ProSiteProfiles | IQ motif profile. | 103 | 131 | - | - | |
Cmu06g0268 | 509 | FunFam | IQ-domain 11 | 102 | 153 | - | - | |
Cmu06g0268 | 509 | Pfam | IQ calmodulin-binding motif | 130 | 146 | IPR000048 | GO:0005515(InterPro) | |
Cmu06g0268 | 509 | Pfam | IQ calmodulin-binding motif | 106 | 124 | IPR000048 | GO:0005515(InterPro) | |
Cmu06g0268 | 509 | PANTHER | IQ-DOMAIN 5-RELATED | 9 | 438 | - | - | |
Cmu06g0268 | 509 | Gene3D | - | 100 | 157 | - | - | |
Cmu06g0268 | 509 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 88 | 148 | IPR027417 | - | |
Cmu06g0268 | 509 | Pfam | Protein of unknown function (DUF4005) | 363 | 469 | IPR025064 | - | |
Cmu06g0268 | 509 | ProSiteProfiles | IQ motif profile. | 127 | 154 | - | - | |
Cmu06g0268 | 509 | MobiDBLite | consensus disorder prediction | 304 | 363 | - | - | |
Cmu06g0268 | 509 | MobiDBLite | consensus disorder prediction | 402 | 425 | - | - | |
Cmu06g0268 | 509 | MobiDBLite | consensus disorder prediction | 17 | 38 | - | - | |
Cmu06g0268 | 509 | MobiDBLite | consensus disorder prediction | 1 | 62 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu05g0018 | Cmu-Chr5:251208 | Cmu06g0268 | Cmu-Chr6:3055150 | 1.30E-114 | dispersed | |
Cmu05g0890 | Cmu-Chr5:8108070 | Cmu06g0268 | Cmu-Chr6:3055150 | 4.40E-18 | dispersed | |
Cmu06g0268 | Cmu-Chr6:3055150 | Cmu09g0071 | Cmu-Chr9:913359 | 5.20E-17 | dispersed | |
Cmu06g0268 | Cmu-Chr6:3055150 | Cmu09g1952 | Cmu-Chr9:35600847 | 6.00E-29 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu06g0268 | - | - | - | 0.0 |