Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu06g0359 ATGCTTCCCCTCTTTGTTTATGGTGGCACGTCGGCAGGAAAAACCAGTGTCATTCTACAAATATTTCGTCATCTCAACCGTCCTTTTGTCTACTCAAGCTGTCGTACTTGTTATAGTTTGCGAACTCTGTTTGAGTGTATCTTGAATCAGTTATTACTTCATCAGAAAGATGCAGATAATGGATATTTGAGTGCAAAACGCTGTGAAAAACCATCAGACTTTGTTAACTTTCTTCGTGAAGCCTTAGTTAAAGTTGTGAAAACTCTCCAGGGGAACCCAGGAAAGTTAGGCACCAAGAAGTTGACAGGACAAGAGCATGGGCATATGATCTACCTGATTTTTGACAACTTGGAACTTGTTAGAGACTGGGACAAGAGTTCAAGCATATTGCCTTTTCTATTTAATCTCCATGAAGTTTTAAACATGAATGAGGTTGGATTTCTCTTCATCAGTAATACTTCTCCAGACGCATACTATTCAAATATGGGTTACTTGGAGCCCATCCCTGTTTATTTCTCTGAGTACACAGAAGATGATCTTCGTAAAATTTTTATGAGGAATCAAGCCAATCAAGAGATGTATTCTTCCTTTCTGAGTGTTGTATTGGGGCCATTCTATAGAATTACTAGACAAGTGAATGAGTTATCCTTAACGCTTTCATCATTGTACAAAACATACTGTGAAGCTTCAGATGATCTGAACAATGTTCCCAACGAGTCCAGCAAGAGGACACGTTTCAGTCATTTTCAGCCACATATTGCCCCTGCTTTGAATCAGATATTTAAAATTTCATCTCCACTTTCCGAGGTTAATAATTTGAAGGAAGCAAAGAGAAAAGGTGGTAGTATGAAGTTTAGCGGGTGTGACTCTTCTGAGCACTTGGATTTTCACATGTCTACTTCAGCAAAATATCTTCTTCTTTCAGCCTTCCTTGCTTCAAGAAACCCAGCTACACTTGATGCATCACTGTTTGATTCAACTGGGGGCACTAGTAGTCGAAAAAAGAGGAAGAGGCCATCTGAAAAATCAATTGAGCAGAAGGAAATTTCAGAACAGGAGTTGCTTATGAAAGGACCTGGAACTTTTCCATTGGAGAGATTGCTTGCAATATTTCAGTGCATTACGTCTGTGGCAGAAATCTCCCTTGAAGACGAGCAAGGAAATGTTTTAATGGAAAGTCAAAATGAGGATAGTGAACTCATGTCTGATGTTCTCCTGCAACTTTCCAGCCTCTGCAATGCAAACTTTGTGGTTAAAGGAGGAAGTTGCCCACTAGAAGGTTCAACTCGATATCGCTCTACAGTGTCTGAAGATATGGCTTTGAAGGTGGCAAGGAGTATTAAGTTCCCCCTGTCCAAGTGCCAAGAGCATGTAGCATCAACGACTTATTTGCTGGACTCGATAGCACAGCAGTGGCTCAATGATGAGCTTGAGAGAAGAAATGGACTGGATCTAATACACGAAGAAGAGAAATACAGAAAATTATTGATGATGGTTAGTTACCAGCTATTGCTGTATGGCTTCAAAAACAGCAGAGATAAGAAAAGGAAAACTGTGGATTATTTTAGCAATGTCTTAGGTCACCTAATCTATTCCTTTGGCTCTCAAAACCGTCGGCAGTAG 1623 40.05 MLPLFVYGGTSAGKTSVILQIFRHLNRPFVYSSCRTCYSLRTLFECILNQLLLHQKDADNGYLSAKRCEKPSDFVNFLREALVKVVKTLQGNPGKLGTKKLTGQEHGHMIYLIFDNLELVRDWDKSSSILPFLFNLHEVLNMNEVGFLFISNTSPDAYYSNMGYLEPIPVYFSEYTEDDLRKIFMRNQANQEMYSSFLSVVLGPFYRITRQVNELSLTLSSLYKTYCEASDDLNNVPNESSKRTRFSHFQPHIAPALNQIFKISSPLSEVNNLKEAKRKGGSMKFSGCDSSEHLDFHMSTSAKYLLLSAFLASRNPATLDASLFDSTGGTSSRKKRKRPSEKSIEQKEISEQELLMKGPGTFPLERLLAIFQCITSVAEISLEDEQGNVLMESQNEDSELMSDVLLQLSSLCNANFVVKGGSCPLEGSTRYRSTVSEDMALKVARSIKFPLSKCQEHVASTTYLLDSIAQQWLNDELERRNGLDLIHEEEKYRKLLMMVSYQLLLYGFKNSRDKKRKTVDYFSNVLGHLIYSFGSQNRRQ 540
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4126814 4134061 + CmPI595203_06g003590.1 Cmu06g0359 418019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu06g0359 540 Pfam ORC5, lid domain 194 242 IPR048866 -
Cmu06g0359 540 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 298 453 IPR047088 -
Cmu06g0359 540 Pfam AAA ATPase domain 4 139 IPR041664 -
Cmu06g0359 540 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 2 453 IPR020796 GO:0000808(InterPro)|GO:0003688(PANTHER)|GO:0005634(InterPro)|GO:0005664(PANTHER)|GO:0006260(InterPro)|GO:0006270(PANTHER)
Cmu06g0359 540 MobiDBLite consensus disorder prediction 322 346 - -
Cmu06g0359 540 FunFam Origin of replication complex subunit 5 1 161 - -
Cmu06g0359 540 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 188 IPR027417 -
Cmu06g0359 540 Gene3D - 2 159 IPR027417 -
Cmu06g0359 540 MobiDBLite consensus disorder prediction 330 346 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu06g0359 K02607 - csv:101223023 818.15