Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmu06g0395 | TTGATAGGCAAAAGTTTTAAGCTTGCAAGCTCAAAGACAATGTGGGAGCCCTCCTTGGTAGTGTGGACATTTTTCATTCTTACATTGTTGTCCATTACTTTCCTTTCAAAAATACTTAAAAATGGAAAGTACATTGGCCAAGATGATCAAAGTCAGAGGAGATACAAATTTCCTCCAGGGAGAAGAAGCTGGCCTGTTATAGGTGATAGCTTCCATTGGTACTCTGCCATTGCAAGTTCTCATCCTTCCAAGTATGTTGAAGAACAGGCCAAAAGATACGGGAAGATCTTCTCGTGTCGTATTTTTGGAAAATGCACAGTAGTATCGATCGATCCAAAATTTAATAGGTATGTGATGCAAAACGAAGGAACGTTGTTTCAATCAAGTTATCCCAAATCTTTCCGAGATTTGGTAGGCCTCAATGGTGTCATCACAGTCCAAGGGGAACAACAAAGGAAACTCCACGCAATTGCTTCCAATTTTATGCGTATAAACAAACTCAACTTTAGCTTCCTAAAAGATATTCAAACCATAATTATCCATTCCTTGACCACTTTCCATGACGGTCATCATCAAGTCATATCTCTCCAAGATGCTTGCAGGAAGATTGCCATTAATCTAATGGTAAGTCAACTATTGGGTGTATCAAGTGAATCTGAAGTGAATGAAATTAGTCAGTTATTTTACGACTTCGTGGATGGCTGTCTATCTATTCCTATCAACTTGCCTGGCTTTGCCTATTACAATGCAATGAAGGCAAGGAAGCAAATCATAAGCAAAATTAAGAAGAAAATAAAGATGCACAAATCAGGCGTAGCAATGGAAACGAGCGGGCAGGAAGTGCTTGCAAGACTATTAGAAGAACAAAAGTACTTATCGGATGAGGCAGTTGAAGATTTCATTATCAATCTTCTTTTTGCTGGAAACGAAACCACTTCTAAAACGATGCTTTTCGCAGTCTATTACCTAACCCACTCACCAAAAGCAATGAAGCAACTCCTGGATGAACAAGATGCTTTAAGAAATGAGTATGGAGATAATACAATCACATGGCAGGATTACAAATCAATGCCCTTTACCCAGTGTGTTATTGATGAGACGCTTCGACTCGGAGGAATTGCAATTTGGTTGATGAGGGAGACGAAAGAAGAGATCAAATACTCAGATTACGAGATTCCAAAGGGAACCTTTGTTGTTCCATTTCTTTGTGCTGTACATTTGGACGAGAATATATATGATGGAGCTTTAACTTTTAACCCTTGGAGATGGATGGAGCTTAAAAATCAGGAAATGAGAAATTGGAGGAATAGCCCATTCTTTGCTCCATTTGGAGGAGGTGGTAGGTTGTGTCCGGGAGCAGAATTGGCCCGTCTCCAAATTGCTTTATTTCTCCACCACTTTGTTACCAAGTACAGGTGGACACAAATTAAAGCAGATAGAATGTCTTTCTTTCCCTCTGCTCGGCTAGTCAACGGCTTCCAAATTCACTTGGAAAAATGGGAACACTGA | 1509 | 39.76 | LIGKSFKLASSKTMWEPSLVVWTFFILTLLSITFLSKILKNGKYIGQDDQSQRRYKFPPGRRSWPVIGDSFHWYSAIASSHPSKYVEEQAKRYGKIFSCRIFGKCTVVSIDPKFNRYVMQNEGTLFQSSYPKSFRDLVGLNGVITVQGEQQRKLHAIASNFMRINKLNFSFLKDIQTIIIHSLTTFHDGHHQVISLQDACRKIAINLMVSQLLGVSSESEVNEISQLFYDFVDGCLSIPINLPGFAYYNAMKARKQIISKIKKKIKMHKSGVAMETSGQEVLARLLEEQKYLSDEAVEDFIINLLFAGNETTSKTMLFAVYYLTHSPKAMKQLLDEQDALRNEYGDNTITWQDYKSMPFTQCVIDETLRLGGIAIWLMRETKEEIKYSDYEIPKGTFVVPFLCAVHLDENIYDGALTFNPWRWMELKNQEMRNWRNSPFFAPFGGGGRLCPGAELARLQIALFLHHFVTKYRWTQIKADRMSFFPSARLVNGFQIHLEKWEH | 502 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 4505851 | 4516223 | + | CmPI595203_06g003950.1 | Cmu06g0395 | 418055 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmu06g0395 | 502 | PRINTS | P450 superfamily signature | 307 | 324 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu06g0395 | 502 | PRINTS | P450 superfamily signature | 450 | 461 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu06g0395 | 502 | PRINTS | P450 superfamily signature | 441 | 450 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu06g0395 | 502 | PRINTS | P450 superfamily signature | 362 | 373 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu06g0395 | 502 | CDD | CYP90-like | 91 | 499 | - | - | |
| Cmu06g0395 | 502 | SUPERFAMILY | Cytochrome P450 | 52 | 497 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu06g0395 | 502 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 443 | 452 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cmu06g0395 | 502 | PANTHER | CYTOCHROME P450 26 | 56 | 471 | - | GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER) | |
| Cmu06g0395 | 502 | PRINTS | E-class P450 group IV signature | 298 | 324 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu06g0395 | 502 | PRINTS | E-class P450 group IV signature | 84 | 107 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu06g0395 | 502 | PRINTS | E-class P450 group IV signature | 434 | 450 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu06g0395 | 502 | PRINTS | E-class P450 group IV signature | 450 | 468 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu06g0395 | 502 | PRINTS | E-class P450 group IV signature | 357 | 373 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu06g0395 | 502 | PRINTS | E-class P450 group IV signature | 406 | 424 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu06g0395 | 502 | Gene3D | Cytochrome P450 | 47 | 500 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu06g0395 | 502 | Pfam | Cytochrome P450 | 58 | 478 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmu06g0395 | Cmu-Chr6:4505851 | Cmu07g0913 | Cmu-Chr7:23112257 | 8.70E-81 | dispersed | |
| Cmu06g0395 | Cmu-Chr6:4505851 | Cmu09g0055 | Cmu-Chr9:798985 | 2.50E-80 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmu06g0395 | - | - | - | 0.0 |