Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu06g0426 ATGGCTAAGTATCTGCTTTTCCCTCTTTGTCTAATAATGTTTGAGTTTATTGCACTCGCTTCAGCGAACATGCAAGTTTCATATGGAGGAGGATACCAAAACCAGCCAACGTTTGGCACACCACCTATCTGCCCGGAGGCAGAAGCCATCATCTTCTCTTGGATCCAAACCGCCATTGCCGAGGACCACCGAATGGCAGCATCTTTGCTTCGACTCCATTTCCACGACTGCTTTGGATGTGATGCTTCTGTTTTGCTGGATGACAATGAGAACTTTGTAGGTGAAAAGACAGCAGCTCCAAATGTGAACTCACTGAGGGGATTTGAAGTGATTGATGCTATAAAATCTGATATTGAATCTGTTTGCCCACAGACAGTTTCATGTGCTGACATTCTAGCAATTGCAGCCAGAGACTCTGTTGGACTATCTGGAGGGCCCTTTTGGAAAGTGGAATTTGGAAGACGCGATAGCATAAGTGCTAGCAAATCAGCAGCACTTAACAACATTCCGGGCCCGAACTCCACTGTAGCCACCCTAGTTTCTAAGTTCCAGAACCTTGGTCTTTCTCTCAGAGATATGGTTGCTCTCTCAGGGGGGCACACACTTGGAAAAGCAAGATGTGTTACATTCAGTTCTAGGCTGCAAGCCAACAGCGGCAGTCCAAATGAAGGAGCAAACCAAGAGTTTATCGAGTCACTAAAACAGCTCTGCTCGATATCTGGTAGTAGCTCGACACTGGCACAGCTCGATGTTGTAACCCCAGCAACATTTGACAACCAATATTACATTAATCTTCTATCTGGAGAGGGGTTACTCCAGTCTGATCATGTTCTTGTGACTGGGGACTACCAGACAAGGGAGATAGTTGAAACCTACGCCGCCGACCCAGTTGCCTTCTTTGAAGATTTCAAACAGTCGATGGTGAAGATGGGAAGCCTCAAACCACCTGCTGAAACACAGACCGTGATCCGAACTAATTGTCGAACTGTAAGCTAG 996 46.39 MAKYLLFPLCLIMFEFIALASANMQVSYGGGYQNQPTFGTPPICPEAEAIIFSWIQTAIAEDHRMAASLLRLHFHDCFGCDASVLLDDNENFVGEKTAAPNVNSLRGFEVIDAIKSDIESVCPQTVSCADILAIAARDSVGLSGGPFWKVEFGRRDSISASKSAALNNIPGPNSTVATLVSKFQNLGLSLRDMVALSGGHTLGKARCVTFSSRLQANSGSPNEGANQEFIESLKQLCSISGSSSTLAQLDVVTPATFDNQYYINLLSGEGLLQSDHVLVTGDYQTREIVETYAADPVAFFEDFKQSMVKMGSLKPPAETQTVIRTNCRTVS 331
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4851341 4852601 - CmPI595203_06g004260.1 Cmu06g0426 418086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu06g0426 331 Pfam Peroxidase 54 295 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu06g0426 331 PANTHER PEROXIDASE 72-RELATED 42 330 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu06g0426 331 PRINTS Haem peroxidase superfamily signature 66 80 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu06g0426 331 PRINTS Haem peroxidase superfamily signature 192 207 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu06g0426 331 PRINTS Haem peroxidase superfamily signature 144 156 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu06g0426 331 PRINTS Haem peroxidase superfamily signature 126 143 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu06g0426 331 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu06g0426 331 FunFam Peroxidase 170 310 - -
Cmu06g0426 331 Gene3D - 44 330 - -
Cmu06g0426 331 PRINTS Plant peroxidase signature 106 119 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu06g0426 331 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu06g0426 331 PRINTS Plant peroxidase signature 44 63 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu06g0426 331 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu06g0426 331 PRINTS Plant peroxidase signature 68 88 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu06g0426 331 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu06g0426 331 PRINTS Plant peroxidase signature 191 203 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu06g0426 331 PRINTS Plant peroxidase signature 125 135 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu06g0426 331 PRINTS Plant peroxidase signature 144 159 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu06g0426 331 ProSitePatterns Peroxidases proximal heme-ligand signature. 192 202 IPR019793 -
Cmu06g0426 331 SUPERFAMILY Heme-dependent peroxidases 43 330 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu06g0426 331 ProSiteProfiles Plant heme peroxidase family profile. 33 331 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu06g0426 331 CDD secretory_peroxidase 44 330 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cmu06g0426 331 FunFam Peroxidase 41 184 - -
Cmu06g0426 331 ProSitePatterns Peroxidases active site signature. 66 77 IPR019794 GO:0004601(InterPro)
Cmu06g0426 331 Gene3D Peroxidase, domain 2 170 311 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu06g0426 Cmu-Chr6:4851341 Cmu11g0585 Cmu-Chr11:6426450 1.20E-73 dispersed
Cmu06g0426 Cmu-Chr6:4851341 Cmu07g0876 Cmu-Chr7:22090367 6.70E-82 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu06g0426 K00430 - csv:101205763 590.112