Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu06g0431 | ATGCTCCGGGGATTCATGAATCTGCTCTCTCTTTGCTGGAAGCCTTTCGGGCGTCCTACTGATGATTTCACCTCTGGTGGTGTTATTGGGACCAATTGTGGTGCTAAAGACACCAAGGATAGCTTGCTTTGGTTCTATGATTATGGTAAGTATGCTTCCGGTGAATTCTCCATGGCTGTTGTTCAAGCCAACCAAGTTCTTGAGGACCAGAGCCAAATTGAATCTGGCCCTTTTGGTACTTTCGTCGGAATCTACGATGGTCATGGTGGTCCTGACGCTGCTCGTTACGTCTGTGATAACTTGTTTAGACGTTTCCAAGATGAGCAACGAGGAGTTGTGACTCGTGAAACCATTCTGAATGCTTTTCGTCGAACGGAGGAAGGGTTCACGGCTGTTGTGTCAGAGTTGTGGAATACTCGACCCCAGATAGCAACAGTTGGGACATGCTGTCTAGTAGGGGTGATACACGAGCAGACACTCTACATTGCGAGTCTAGGAGATTCTCGTGCTGTGTTAGGGAAGAAAGTTGGCAACACTGGGGAGATTGCTGCCATTCAATTATCGACCGAGCATAATGCAAATCTTGAGGAAATCAGGGAAGAATTAAGCGCCATGCATCATGATGATCCTCAAATCGTGGTTCAAAGGCATGGAGTTTGGAGAGTGAAAGGAATTATACAGGTTTCTAGATCCATTGGGGATGTCTATTTGAAACATGCTCAGTATAATAATGAAAGAATCAATGCTAAATTTAGGCTTCCTGAACCAATTGACAGGCCTATATTGACTGCTGTACCTACGATTATTGCTCACCCTCTTCATCAAAACGATTCTTTTCTCATATTTGCATCCGATGGACTTTGGGAACACCTAACCAATGAAAAAGCAGTGGAGATTGTCCATAATCATCCACGTGCAGGAAGTGCAAAAAGGCTTGTGAAGGCAGCCCTTCAAGAAGCAGCTCGAAAACGAGAGATGCGGTATTCGGATCTCCGAAAGATCGACAAGAAGGTTCGGCGTCATTTTCATGATGACATTAGTGTTATTGTTTTATTTTTCAACCACGATCTTATATCCAGAAGCAATGTCCTCCTAGATCAACCATTATCAGTAAGAAGTGCTTTTGACCATTAA | 1134 | 44.09 | MLRGFMNLLSLCWKPFGRPTDDFTSGGVIGTNCGAKDTKDSLLWFYDYGKYASGEFSMAVVQANQVLEDQSQIESGPFGTFVGIYDGHGGPDAARYVCDNLFRRFQDEQRGVVTRETILNAFRRTEEGFTAVVSELWNTRPQIATVGTCCLVGVIHEQTLYIASLGDSRAVLGKKVGNTGEIAAIQLSTEHNANLEEIREELSAMHHDDPQIVVQRHGVWRVKGIIQVSRSIGDVYLKHAQYNNERINAKFRLPEPIDRPILTAVPTIIAHPLHQNDSFLIFASDGLWEHLTNEKAVEIVHNHPRAGSAKRLVKAALQEAARKREMRYSDLRKIDKKVRRHFHDDISVIVLFFNHDLISRSNVLLDQPLSVRSAFDH | 377 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 4920685 | 4924134 | - | CmPI595203_06g004310.1 | Cmu06g0431 | 418091 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu06g0431 | 377 | Gene3D | - | 47 | 362 | IPR036457 | - | |
Cmu06g0431 | 377 | SUPERFAMILY | PP2C-like | 64 | 354 | IPR036457 | - | |
Cmu06g0431 | 377 | ProSiteProfiles | PPM-type phosphatase domain profile. | 52 | 353 | IPR001932 | - | |
Cmu06g0431 | 377 | CDD | PP2Cc | 56 | 353 | IPR001932 | - | |
Cmu06g0431 | 377 | PANTHER | PROTEIN PHOSPHATASE | 53 | 352 | IPR015655 | GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Cmu06g0431 | 377 | SMART | PP2C_4 | 49 | 351 | IPR001932 | - | |
Cmu06g0431 | 377 | FunFam | Probable protein phosphatase 2C 42 | 46 | 361 | - | - | |
Cmu06g0431 | 377 | Pfam | Protein phosphatase 2C | 80 | 320 | IPR001932 | - | |
Cmu06g0431 | 377 | ProSitePatterns | PPM-type phosphatase domain signature. | 81 | 89 | IPR000222 | GO:0043169(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu06g0431 | Cmu-Chr6:4920685 | Cmu10g0895 | Cmu-Chr10:994325 | 2.10E-116 | dispersed | |
Cmu06g0431 | Cmu-Chr6:4920685 | Cmu02g1208 | Cmu-Chr2:24863102 | 7.40E-117 | transposed | |
Cmu06g0431 | Cmu-Chr6:4920685 | Cmu01g2001 | Cmu-Chr1:33235040 | 7.40E-117 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu06g0431 | K01102 | - | csv:101207284 | 723.391 |