Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu06g0445 ATGGCATTTTGGTGGACTCTGCTTGTTCTTGGATTTGCTTACGCGATCTGTAGGTTACTTTTGATGCTTATCCCTCCGAATGTGCCTTCAATCGAAGTTGACGCATCTGACGTTATGGACGACGGGAATCAGACGCAGGAGAATAGCTACATCTACATTCCACCTAGGGTAAAGACACAACAGCAAGACAAGAGAGTCCAGTGTTACGAGCCTGCAACTATGAAATACCTGGGCTATTTTCCTGCATTGTCACGAGATGAGGTCAAGGAGCGTGTTGCTTCAGCCAGGAAAGCGCAGAAAGAATGGGCCAAAAGTAGCTTCAAGCAAAGGCGTTTGCTTTTACGGATACTTTTGAAGTACATTATTGAACATCAAGAGCTCATTTGCGAGATCTCCTCCCGTGAAACTGGAAAAACAATAGTGGATGCTAATATGGGAGAAGTAATGGCGACATGTGAAAAGATTACTTGGCTTCTTTCAGAGGGTGAGAAATGGCTGAAGCCTGAGAGCCGATCATGTGGAAGGGCAACACTTCACAAGAAAGCCCGAGTAGAATTTCATCCCCTTGGAGTTATTGGGGCGATAGTCCCATGGAACTATCCATTCCATAACATTTTCAATCCAGTGCTTGCAGCAGTCTTTGCAGGAAACGGCATTGTAGTTAAGGTTTCAGAACATGCAAGTTGGTCAGGATGCTTTTATATCAGGATTATCCAAGCTGCACTTGCTGCTGTTGGAGCTCCCGAGAGTTTGGTTGATGTGATAACAGGGTTTGCTGAAACAGGTGAAGCGCTAGTGTCTTCAGTAGACAAAATGATATTCGTTGGATCTACTGGTGTGGGTAGGATGATAATGAAAACTGCTGCTGAGACACTTATTCCAGTTACTCTTGAGTTGGGTGGAAAGGACGCATTTATCGTGTGTGAGGATGTAGATCTGGATCATGTGGTAAACGTTGCTCTCAGGGCTTCTATTACATCAAGTGGACATAATTGTACTGGAGCTGAGAGATTTTATGTCCACAAGAACATTTATTCTTCGTTTGTGGATAAAATATCAGAACGTGTAAAGGCTATTACAGTTGGTCCACCGTTAGCTGGGAAATATGATATGGGTGCCATCTGTACGCAAGAGCAGTCTGAGAAACTTCAAAGCCTTGTAAATGATGCCTTAGACAGAGGGGCTAAAATTGTTGCTCGTGGAACTTTTGGACATTTACCTGAAGGTGCCGTTGATCAATATTTCCCGCCTACCGTTATTGTTGATGTCAACCATACAATGAAGTTAATGCAAGAGGAGGCATTTGGACCAATCCTGCCTATAATGAAATTCACCACAGATGATGAGGCCGTGAATCTTGCAAATGATTCAAGGTTTGGGCTTGGTTGTGCTGTCTTCTCTGGCAGTCAGCGGCGTGCCAAGAACATTGCTTCGCAGATACGTACTGGAAGTGTTGCAATTAATGACTTTGCCACAAATTATTTGTGCCAGTCCTTGCCATTTGGTGGTGTAAAAGAGAGTGGATTCGGTCGATTTGCGGGCGTTGAAGGATTACGAGCTTGTTGTCTTGTTAAAGCAGTTGTTGAGGATAGGTGGTGGCCATACATTCAGACCAAGCATCCGAAGCCTCTTACGTATCCTGTTGCAGACAACGCCTTTGAGTTTCAGATGTCACTTGTCGAAGCAACGTATGGGCTGAACATATGGGATCGATTAAGAGCATTGGTCAATGTTCTGAAGATGCTGTCCGAGCAGAACACTCCGTCCAAAGACAACTCTACCATTGATGATGAAAGTAAGAGAGCTGATTGA 1812 44.32 MAFWWTLLVLGFAYAICRLLLMLIPPNVPSIEVDASDVMDDGNQTQENSYIYIPPRVKTQQQDKRVQCYEPATMKYLGYFPALSRDEVKERVASARKAQKEWAKSSFKQRRLLLRILLKYIIEHQELICEISSRETGKTIVDANMGEVMATCEKITWLLSEGEKWLKPESRSCGRATLHKKARVEFHPLGVIGAIVPWNYPFHNIFNPVLAAVFAGNGIVVKVSEHASWSGCFYIRIIQAALAAVGAPESLVDVITGFAETGEALVSSVDKMIFVGSTGVGRMIMKTAAETLIPVTLELGGKDAFIVCEDVDLDHVVNVALRASITSSGHNCTGAERFYVHKNIYSSFVDKISERVKAITVGPPLAGKYDMGAICTQEQSEKLQSLVNDALDRGAKIVARGTFGHLPEGAVDQYFPPTVIVDVNHTMKLMQEEAFGPILPIMKFTTDDEAVNLANDSRFGLGCAVFSGSQRRAKNIASQIRTGSVAINDFATNYLCQSLPFGGVKESGFGRFAGVEGLRACCLVKAVVEDRWWPYIQTKHPKPLTYPVADNAFEFQMSLVEATYGLNIWDRLRALVNVLKMLSEQNTPSKDNSTIDDESKRAD 603
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5032240 5040864 + CmPI595203_06g004450.1 Cmu06g0445 418105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu06g0445 603 FunFam aldehyde dehydrogenase 22A1 65 317 - -
Cmu06g0445 603 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 55 528 - -
Cmu06g0445 603 SUPERFAMILY ALDH-like 50 529 IPR016161 GO:0016491(InterPro)
Cmu06g0445 603 Pfam Aldehyde dehydrogenase family 61 527 IPR015590 GO:0016491(InterPro)
Cmu06g0445 603 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 297 304 IPR029510 GO:0016491(InterPro)
Cmu06g0445 603 CDD ALDH_F15-22 69 531 - -
Cmu06g0445 603 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 65 525 IPR016162 GO:0016491(InterPro)
Cmu06g0445 603 FunFam Aldehyde dehydrogenase A 301 495 - -
Cmu06g0445 603 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 500 IPR016163 GO:0016620(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g1700 Cmu-Chr2:30883595 Cmu06g0445 Cmu-Chr6:5032240 7.00E-46 dispersed
Cmu06g0445 Cmu-Chr6:5032240 Cmu06g1717 Cmu-Chr6:28187964 3.60E-57 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu06g0445 - - - 0.0