Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu06g0475 ATGGTGCTTTTCCCGGAAGTCATTGAAGAAATGGTAAGAAATATGTCGATAAAGAAAAAGAATAATGAAGATGATGGCGGTAAAGAAGGGGGTCGAGAAGTAATGAGTAAAGAGGGAAAAAGAAAAAAATCCATGATTTGTTTATCTGGAAGTGTTAAAACCACCAAGTTCGATGATATGGCTTCTGTTTGCTCCAAGAGAGGAAATAAAGGAATTAATCAGGATTCGCTCGTTGTTTGGGAGGATTATGGCAACCGAGGAGATGTAGTTTTATGTGGAATGTTTGATGGGCATGGGCCTTGGGGCCACATGATTAGCAAACAAGTCAGAAAGTCACTACCTTCTCAATTACTTACCAATTGGCAACAAAACCTTTCCATGCAAACCGACCAAAACCATCTCTTTCCTTTCAACCTATGGAAGCAATCTTGCTTAAAAACTTATGCCGCCATTGATGAAGAGCTCAAGCAACACCCTCGCATTGATTCTTTTTACAGTGGCACCACCGCTTTAACCCTCGTTAAACAGGGGCGACACCTTGTTGTTGCAAATGCTGGCGATTCACGGGCTGTGTTGGCGGTAACTTCTGGTGATGGCTGCTTGAAACCAATTCAACTCTCCGTTGATTTCCGACCTAATTTGCCTGAGGAAGCTGAAAGAATAAAACAATCGAAAGGGAGAGTGGTATGTTTAAAAGATGAACCTGGGGTTTATAGGGTGTGGACTCCCGATTCAGGGACTCCAGGATTGGCAATTTCTAGAGCTTTTGGCGATTATTGCACCAAACAGTATGGTCTCATTTCTGTGCCTGATGTAAGCCATCGAATCATCACTACTTCAGATCAATTTGTCATTGTCGCCACCGATGGGGTATGGGACGTCATGTCGAATCAAGAAGCGGTTCACATAGTTTCTTCAACACCAAATAGGGAAATGTCGGCCAAAAGGCTAGTGGATTGTGCTGCACGTGCATGGAAATCAAAGAAACGAGGATCATTTACGCCATTGTTTGAGCTTCTGATTCGCGCGGGCAGTGCCATATCGTTTCGCTCTCAAATTCGCTCATCTCTAAGCCATTCCCCTTCGCATCGCATCCTAATCCGAAGGAACTTCGAGATGAGTCCGATTTTGAATGAAGCAGAACCGAAGGAACTGCGAGATGAGTCTGATATTGAAGCAATCTTCTCCGACGGCGATTATATTTCTGTTTTTGGCGTTGAATCTCTCCTCTCAGAACCAAAGGAGCTGCGAGATGAGTCCGATTTTGAAGCAATCTTCTCCGACGGCGATTATATTTCCGTTTGTGGCTTTGGATCTCTCCTCTCTGAGAGGAGTGCGCGAAGTACTTTTCCTGATTTGATCAACTTTAGAGTTGCGAGATTGAACGATTTCAGACGCGTTTTCGGAATTATAGCCCCTATATTCTTTGACCACGGCATTGCTAAATCTGAAACCAAGGAGATTTCAAGCTTATTTGCGGAGCCTTGTGAAGGAGAAACTATCATCATTACAGTTTTCGAGATTAAGAAGTCTGAGATTCCAGCGTTCATACAGAGAGAGTTTGCGTTTCGATTTCTAGCTGTGCTTTGTTCTCGATCCACTAACGAGGAGTTTTTCCAAGTGAAATGCAAAGGAAACAAGGACATTTTTCTTCAGCATTATGGTCGTCATAATATTGATAAGATCTGGAGAGATGATATCTTACCTTGA 1710 43.04 MVLFPEVIEEMVRNMSIKKKNNEDDGGKEGGREVMSKEGKRKKSMICLSGSVKTTKFDDMASVCSKRGNKGINQDSLVVWEDYGNRGDVVLCGMFDGHGPWGHMISKQVRKSLPSQLLTNWQQNLSMQTDQNHLFPFNLWKQSCLKTYAAIDEELKQHPRIDSFYSGTTALTLVKQGRHLVVANAGDSRAVLAVTSGDGCLKPIQLSVDFRPNLPEEAERIKQSKGRVVCLKDEPGVYRVWTPDSGTPGLAISRAFGDYCTKQYGLISVPDVSHRIITTSDQFVIVATDGVWDVMSNQEAVHIVSSTPNREMSAKRLVDCAARAWKSKKRGSFTPLFELLIRAGSAISFRSQIRSSLSHSPSHRILIRRNFEMSPILNEAEPKELRDESDIEAIFSDGDYISVFGVESLLSEPKELRDESDFEAIFSDGDYISVCGFGSLLSERSARSTFPDLINFRVARLNDFRRVFGIIAPIFFDHGIAKSETKEISSLFAEPCEGETIIITVFEIKKSEIPAFIQREFAFRFLAVLCSRSTNEEFFQVKCKGNKDIFLQHYGRHNIDKIWRDDILP 569
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5320025 5329029 - CmPI595203_06g004750.1 Cmu06g0475 418135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu06g0475 569 PANTHER OS05G0358400 PROTEIN 414 569 - -
Cmu06g0475 569 MobiDBLite consensus disorder prediction 18 41 - -
Cmu06g0475 569 SMART PP2C_4 50 324 IPR001932 -
Cmu06g0475 569 Gene3D - 50 333 IPR036457 -
Cmu06g0475 569 ProSiteProfiles PPM-type phosphatase domain profile. 60 340 IPR001932 -
Cmu06g0475 569 Pfam Protein phosphatase 2C 86 322 IPR001932 -
Cmu06g0475 569 CDD PP2Cc 60 327 IPR001932 -
Cmu06g0475 569 SUPERFAMILY PP2C-like 60 325 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g2342 Cmu-Chr3:32051469 Cmu06g0475 Cmu-Chr6:5320025 7.00E-96 dispersed
Cmu06g0475 Cmu-Chr6:5320025 Cmu11g0993 Cmu-Chr11:15672333 3.60E-83 dispersed
Cmu06g0474 Cmu-Chr6:5308791 Cmu06g0475 Cmu-Chr6:5320025 1.20E-67 tandem
Cmu02g1517 Cmu-Chr2:28882863 Cmu06g0475 Cmu-Chr6:5320025 1.30E-113 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu06g0475 - - - 0.0