Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu06g0571 ATGGACAATCGCCACCATTCCATTCACTCGGATTCTGAATCGATCAAATTCCACAAGAAACTCGTAAATTTTCCTGGGGTAGGAAAAGAACGAACTCATAGAACTTGGATTCTTCGGTTTTCTACTATGGAAATGGATCGTGATGATTTGAGCGTTCGATTATCTGCTCTATGGAACATCATTGGTCTAAAGAGAAGCCTTAAAGAGGACAGAATTCCTTGCCAAATTGAAGAGGGTCTGTTCTTAGGCTCTGTTGGAGCTGCCCATAACAAAGATCAATTGAAGAAATTGAATATCACTCACATCTTAACCATTGCTTGTTCTTTGCCACCTGCTGATCCAAATGATTTTGTATGTAAAGTAGTTGGTGTCTTGGACACTAGAGATGCAGATATTAAACAACACTTTGATGATTGTTTCAATTTTATCGATGAGGGAAGACAATCTGGTGGAGGGGTCTTGATTCATTGCTTTGCTGGAATATCCAGAAGTGTAACCATTACAGTTGCCTATCTGATGAAAAAGCGTGGTATGAATCTAACTCAAGCATTGGAACACGTCAAGAGTAGACGACCGCAGGCAGCTCCAAATGTTGGTTTCATGGTTCAACTCAAGGACTTTGAAACAGCCCTTCAAGCAGATGATCAGATGAAACTGTCAAATGTTTTGAGTTCTAAGCAGCTGCTGGTAACCTCCTTTAACAACAGAATCAGGGGGAGAAAGAGTGGACAATCAGACAACAATGGATAA 750 40.53 MDNRHHSIHSDSESIKFHKKLVNFPGVGKERTHRTWILRFSTMEMDRDDLSVRLSALWNIIGLKRSLKEDRIPCQIEEGLFLGSVGAAHNKDQLKKLNITHILTIACSLPPADPNDFVCKVVGVLDTRDADIKQHFDDCFNFIDEGRQSGGGVLIHCFAGISRSVTITVAYLMKKRGMNLTQALEHVKSRRPQAAPNVGFMVQLKDFETALQADDQMKLSNVLSSKQLLVTSFNNRIRGRKSGQSDNNG 249
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6364318 6368812 - CmPI595203_06g005710.1 Cmu06g0571 418231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu06g0571 249 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 134 192 IPR000387 GO:0016311(InterPro)
Cmu06g0571 249 SMART dsp_5 72 210 IPR020422 GO:0006470(InterPro)
Cmu06g0571 249 Gene3D Protein tyrosine phosphatase superfamily 66 221 IPR029021 -
Cmu06g0571 249 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 60 214 - GO:0004721(PANTHER)|GO:0008330(PANTHER)|GO:0017017(PANTHER)|GO:0033550(PANTHER)|GO:0043409(PANTHER)
Cmu06g0571 249 Pfam Dual specificity phosphatase, catalytic domain 80 209 IPR000340 GO:0016311(InterPro)
Cmu06g0571 249 FunFam Dual specificity phosphatase 12 74 228 - -
Cmu06g0571 249 CDD DSP 73 206 - -
Cmu06g0571 249 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 73 214 IPR029021 -
Cmu06g0571 249 ProSiteProfiles Dual specificity protein phosphatase domain profile. 72 213 IPR020422 GO:0006470(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu06g0571 Cmu-Chr6:6364318 Cmu10g2125 Cmu-Chr10:27252569 3.50E-14 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu06g0571 - - - 0.0