Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu06g0582 ATGGAAAATTTTGATTTAGAGCAATGTGGGAGTTGCGACCATTTCAAAGCGACCTTCTCGCGAAAACCCCAGGGCCAGGCAAATCTGTTTCCTCACAGGGGAGAGAGAGCGATGACGATGGCGATACCAGGGAGCATTGTCGTTGTTCTTCTCCTTATGTTGCTTCTCATCATCCTCCTCCTCCTCATTGCCTGCAAACCATGGCGTTTCTTTTCCTATTCCCGTTCTCGCACAATCAAGGTTCCTGACCTTGAGAGACCCCTTGTCTCTGATGCTGCAGATGTCACTCAAAACCAATTCAGTGAGGTTCCCAGAGATTATGATCTGGAGGGTGCACTTCAAACTGATGGACATTTTCGGTCCCCGAGATTACATGGACTGATTCATAAACAAAGACTGCCACCTTTGTCTCCCCATTCAAGTGATAGATTGGTTCCAGATGTAGTTCCCGATCCTTTGGAAGTTATTTCAGTTGGTCAAACCCTTAAACGTACTTACTTTGCTAACCAGATTCCAGAAGTTCAAAAGCATGCAAAACTGAGCCTAGGAAGTGATCAACTCCACGAAATTGCAAGTCAAGATATCTCACATGGAAGAAGTTACCTCACTTTGGAGGTCACCTCCGGTCCTTCTCGTGGAGTGCGTTATTCAATTCATTCTGCAAACACGTCTAGGCTTCCTTTGACTCTTGGAAGAGTACCTCCTAGTGATTTACAGTTGAAGGATTCCGAAGTCTCAGGGAAGCATGCCTTGATAAAATGGAATCTAAATAATATGAAATGGGAGCTTGTGGACCTGGGTAGCTTAAATGGGACCTTATTAAATTCTCAACCAATCAACAATCCTGATTCTGGAAGTAGACATTGGGGTGACCCAGTTGAGCTTACGAGTGGAGATGTTATAACTCTTGGTACAACCTCCAAAGTGTATGTTCATATTACATCTCAGATTGAGAACCATATTCCCTTTGGAGTTGGTTTGGCTTCAGATCCAATGGCTTTACGTCGTGGTGGAAAGAAGCTTGCCATGGAAGATGTTTGCTATTATCATTGGCCTCTTCCTGGGGTTGCTCAGTTTGGACTCTTTGGTATCTGCGATGGGCATAGTGGAGTAGGGGCTGCCAAATCTGCTAGCGAGATTCTTCCGGAGAAGGTTGCCAAAATTCTATCTGATCCACTGAAAAGGGAGACGGTAGTATCTCTTCGTGATGCTTCAGATGTTCTTAGAGAAGCATTTTCTCAGACTGAGGCTTGCATGAATCACTATTATGAGGGTTGTACTGCCACGGTGCTTTTAGTATGGGCTGATAGTGAGGAAAATTACTTTGTGCAATGTGCGAACGTTGGGGACTCTGCTTGTGTTCTCAATGTTCATGGGAAGCAGATGAAGATGACAGAAGATCACAGAATAACTAGCTATTCAGAGAGACTCCGAATAGAACAAGCAGGAGAACCATTGAAAGATGGAGAGACACGTTTGTGTGGCTTGAACCTTGCAAGGATGCTTGGTGACAAGTTTCTTAAACAACAAGACCATCGTTTCAGTTCAGAACCTTATATAAGTGAAGTTGTCCATGTAGATCAAGGAAGCAAAGCTTTTGCAGTGATGGCAAGTGATGGCTTTTGGGATGTGATTGGTGTGAAGAAGGCAATTCAGCTGGTTCTTCAGGCTAGGGAGAAATACTCCACAAGTGCAGAAAATTCAGCCGAAAAGGTTGCGAATTTTTTGTTGGGGGAGGCTAGAACACTGCGTACAAAAGATAATACATCCATAATTTTCTTAGATTTTGAGGTTTCTCATAGAATCACTTGTAAAGTTGAACCATAA 1827 43.68 MENFDLEQCGSCDHFKATFSRKPQGQANLFPHRGERAMTMAIPGSIVVVLLLMLLLIILLLLIACKPWRFFSYSRSRTIKVPDLERPLVSDAADVTQNQFSEVPRDYDLEGALQTDGHFRSPRLHGLIHKQRLPPLSPHSSDRLVPDVVPDPLEVISVGQTLKRTYFANQIPEVQKHAKLSLGSDQLHEIASQDISHGRSYLTLEVTSGPSRGVRYSIHSANTSRLPLTLGRVPPSDLQLKDSEVSGKHALIKWNLNNMKWELVDLGSLNGTLLNSQPINNPDSGSRHWGDPVELTSGDVITLGTTSKVYVHITSQIENHIPFGVGLASDPMALRRGGKKLAMEDVCYYHWPLPGVAQFGLFGICDGHSGVGAAKSASEILPEKVAKILSDPLKRETVVSLRDASDVLREAFSQTEACMNHYYEGCTATVLLVWADSEENYFVQCANVGDSACVLNVHGKQMKMTEDHRITSYSERLRIEQAGEPLKDGETRLCGLNLARMLGDKFLKQQDHRFSSEPYISEVVHVDQGSKAFAVMASDGFWDVIGVKKAIQLVLQAREKYSTSAENSAEKVANFLLGEARTLRTKDNTSIIFLDFEVSHRITCKVEP 608
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6517946 6524007 + CmPI595203_06g005820.1 Cmu06g0582 418242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu06g0582 608 CDD FHA_PP2C70-like 202 312 - -
Cmu06g0582 608 SUPERFAMILY SMAD/FHA domain 201 312 IPR008984 GO:0005515(InterPro)
Cmu06g0582 608 Pfam Protein phosphatase 2C 335 589 IPR001932 -
Cmu06g0582 608 ProSiteProfiles PPM-type phosphatase domain profile. 324 596 IPR001932 -
Cmu06g0582 608 Gene3D - 331 599 IPR036457 -
Cmu06g0582 608 Gene3D - 196 330 - -
Cmu06g0582 608 SMART FHA_2 227 279 IPR000253 GO:0005515(InterPro)
Cmu06g0582 608 SMART PP2C_4 318 594 IPR001932 -
Cmu06g0582 608 CDD PP2Cc 336 596 IPR001932 -
Cmu06g0582 608 FunFam Protein phosphatase 2C 70 197 331 - -
Cmu06g0582 608 FunFam Protein phosphatase 2C 70 332 603 - -
Cmu06g0582 608 ProSiteProfiles Forkhead-associated (FHA) domain profile. 228 279 IPR000253 GO:0005515(InterPro)
Cmu06g0582 608 PANTHER PROTEIN PHOSPHATASE 2C 337 596 IPR015655 GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro)
Cmu06g0582 608 Pfam FHA domain 229 304 IPR000253 GO:0005515(InterPro)
Cmu06g0582 608 SUPERFAMILY PP2C-like 337 596 IPR036457 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu06g0582 K01090 - csv:101217195 1027.7