Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu06g0631 ATGAGTGCCGGCACGGCGACGTTCCGGTCTATACTCGACAAACCCCTCAACCAGTTGACGGAGGATGACATTTCGCAGCTCACTCGAGAGGATTGTCGCAAATACCTAAAAGAAAAAGGAATGCGGCGGCCCTCATGGAACAAATCTCAGGCGATCCAGCAGGTTATTTCTCTCAAAGCATTGCTTGAACCTTGTGATGATTCCGGCGCCGGTGCTCTCAGGAAGGTCGTCGTTTCGCCTCGGGTGAATTCAAATCAAGGCGATTCACCCAAAGAACCGAGTGATGATGCTCAGGTTACAGTGTCAGTTGATGAATCTGCTTATAGCAATGTGGAGACTGCAAAATCTACTCCTGAGGATCCACCGGTTGAACCAGACAACTATGTCACTAGTCCCAGAGATCAATATGATACGAATGGAGTGGATGGTCAAATGACAATTTTCTATTGTGGCAAGGTGAATGTGTATGATGGAGTTCCACCAGATAAGGCATGGGCAATCATGCATCTTGCAGCTAGTCCAATTCATTTCCCTCAGAATCATCCCTTGGGTGGAACTGCTGTATGTCAGTCTCCACCATGTCTTTTGCAGACTTCCAGTGACAGAGATGACTTTTTTCCTCCTAGTGCTACCATCTATAGAAATGTGCACACAGAGAAGATGGTTGAACACTCTCAGCAGCAGCAGCAAGCAAAGGGAACCAGTACACGAGATTCTGATGTTGAGGGTCAGGCGAGTCGGCAAGTTTCATTACAGAGATATCGTGAAAAGCGAAAAGACAGGGGAAGGTTAAAGAACAAGAAAAATACAGGATTGTCTTCTTCTAGCCTGGAGGGATATATGAACCATCCAATGAGGACGCACATATCCAATAAGAATTTAGGTCAGATTGTGACAAGCTCTTTATCTCCAACTGGAGTAGCAAAAGCCTTCGTTGGAACAGCTGACAATCAGCCAAAACTTGCATGTTTTCCTGTCGACCTTAATGTCAAAGATATCCAGGAGTCCTGA 1011 45.99 MSAGTATFRSILDKPLNQLTEDDISQLTREDCRKYLKEKGMRRPSWNKSQAIQQVISLKALLEPCDDSGAGALRKVVVSPRVNSNQGDSPKEPSDDAQVTVSVDESAYSNVETAKSTPEDPPVEPDNYVTSPRDQYDTNGVDGQMTIFYCGKVNVYDGVPPDKAWAIMHLAASPIHFPQNHPLGGTAVCQSPPCLLQTSSDRDDFFPPSATIYRNVHTEKMVEHSQQQQQAKGTSTRDSDVEGQASRQVSLQRYREKRKDRGRLKNKKNTGLSSSSLEGYMNHPMRTHISNKNLGQIVTSSLSPTGVAKAFVGTADNQPKLACFPVDLNVKDIQES 336
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7100819 7105514 + CmPI595203_06g006310.1 Cmu06g0631 418291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu06g0631 336 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 20 261 IPR040390 GO:0005634(PANTHER)|GO:0009611(PANTHER)|GO:0031347(PANTHER)|GO:2000022(PANTHER)
Cmu06g0631 336 ProSiteProfiles Tify domain profile. 138 173 IPR010399 -
Cmu06g0631 336 MobiDBLite consensus disorder prediction 220 282 - -
Cmu06g0631 336 MobiDBLite consensus disorder prediction 268 282 - -
Cmu06g0631 336 MobiDBLite consensus disorder prediction 81 100 - -
Cmu06g0631 336 MobiDBLite consensus disorder prediction 107 126 - -
Cmu06g0631 336 Pfam tify domain 144 172 IPR010399 -
Cmu06g0631 336 Pfam Jas motif 245 261 IPR018467 -
Cmu06g0631 336 SMART tify_2 138 173 IPR010399 -
Cmu06g0631 336 MobiDBLite consensus disorder prediction 222 250 - -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
6364 PF06200 tify 3.00E-15 No_clan Cmu TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu06g0631 - - - 0.0