Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu06g0647 ATGGCTCGGGACGGGCATGTAGTGCCAGTGGATCCACAGACGGTGCTGACTGTGAAGAAGAAGAAACAGTCTTCTCGGAATTGGATTCTACTGGATTGTACGGGCCAAGGGACCGTCCTCGATGTCGACAAGCATGCTATTATGCATCGAGTTCAAATTCATGCTCGAGACCTTCGGATTCTTGATCCTTTGCTTTCTTATCCCTCCACGATTTTAGGGCGTGAGAGGGCCATTGTTCTTAATCTCGAGCATATAAAGGCGATCATTACTGCTGAAGAGGTTTTGCTTAGAGATCCGACAGATGAACATGTCATCCCTGTGGTGGAGGAGCTGCAGAGGCGACTGCCTCCTTCTAATGCCTTCCAGTTTCAAGTTCAAGGAGATGGTAAAGAGTATCAGGGCCAACATGATGGTGAAGCTGAAGAAGATGACTCGCCATTTGAATTTCGTGCCCTTGAAGTTGCTTTGGAAGCCATATGTAGTTTTCTTGCTGCACGGACAACTGAACTGGAGACTGCTGCTTATCCTGCCCTGGATGAGCTTACTGCCAAGATTAGTAGCCGCAACTTGGACAGAGTTCGTAAATTGAAGAGTGCAATGACCAGGTTGACTGCGAGGGTTCAAAAGGTGAGAGATGAGCTTGAACAATTACTGGATGATGATGATGATATGGCAGACCTTTACTTGTCAAGAAAGATGAGTTCATCCTCTCCTGTAAGTGGTTCTGGTCCTGCCAATTGGTTTCCTGCCTCTCCTACAATTGGTTCAAAGATCTCAAGAGCAAGCAGAGCAAGTGTTGCGACTGTACGAGGGGATGAGGATGATATTGAGGAGCTTGAAATGTTACTGGAGGCTTACTTTATGCAGATTGATGGAACATTGAACAAATTAACCACACTGCGAGAATATATTGATGACACAGAAGATTATATTAATATCCAGCTTGACAATCACCGAAATCAACTCATTCAGTTGGAGCTCTTTTTAAGTTCTGGAACTGTTTGTTTGTCTATCTATTCTTTGGTGAGTGCAATATTCGGCATGAACATTCCATACACTTGGAATGACGATCACGGATACATGTTTAAATGGGTTGTCATTGTTTCTGGAGTAGCTTGTGCGGTGTTGTTTGTCACAATTATTTACTATGCTCGCTACAAAGGTTTGGTGGGATCTTGA 1179 44.36 MARDGHVVPVDPQTVLTVKKKKQSSRNWILLDCTGQGTVLDVDKHAIMHRVQIHARDLRILDPLLSYPSTILGRERAIVLNLEHIKAIITAEEVLLRDPTDEHVIPVVEELQRRLPPSNAFQFQVQGDGKEYQGQHDGEAEEDDSPFEFRALEVALEAICSFLAARTTELETAAYPALDELTAKISSRNLDRVRKLKSAMTRLTARVQKVRDELEQLLDDDDDMADLYLSRKMSSSSPVSGSGPANWFPASPTIGSKISRASRASVATVRGDEDDIEELEMLLEAYFMQIDGTLNKLTTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSIYSLVSAIFGMNIPYTWNDDHGYMFKWVVIVSGVACAVLFVTIIYYARYKGLVGS 392
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7360798 7365209 + CmPI595203_06g006470.1 Cmu06g0647 418307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu06g0647 392 Gene3D Magnesium transport protein CorA, transmembrane region 105 322 - -
Cmu06g0647 392 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 13 389 IPR039204 GO:0015095(PANTHER)|GO:0015693(PANTHER)
Cmu06g0647 392 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 328 380 IPR045863 -
Cmu06g0647 392 CDD Mrs2_Mfm1p-like 28 389 IPR039204 -
Cmu06g0647 392 FunFam Magnesium transporter MRS2-1 16 99 - -
Cmu06g0647 392 Coils Coil 193 220 - -
Cmu06g0647 392 Gene3D - 14 99 - -
Cmu06g0647 392 Pfam Magnesium transporter MRS2-like 272 319 - -
Cmu06g0647 392 Pfam Magnesium transporter MRS2-like 40 235 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu06g0647 Cmu-Chr6:7360798 Cmu10g2053 Cmu-Chr10:26325819 4.00E-89 dispersed
Cmu06g0647 Cmu-Chr6:7360798 Cmu07g0122 Cmu-Chr7:1073170 4.90E-148 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu06g0647 K16075 - csv:101203841 703.745