Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu06g0697 ATGAAGACAGAGTGTTCCTCTTCTTCACTGCTGCTTCTTCTTCACCCGAAATCGCGGGCCGTACATTTCCTTACTCTCTTCTCTAGGGTTTCGCTTCGCTTCGCTCCGCTTCTCATTGCTTTCCTGCTGTTTTTTCTCGGACAAGTTGTACGAAAATCACATTATCTAACCTACTGGAGACATACTGCTCAGTATATGTATATTTGCCGTACTACAACAATGGAAGCTACTAGGTGTTGGTTTAATAAGTTTAGATCCAAAGACAAGCCAAAGCCCTCAACAAATAAGGAGAGTACAGGCAATGCAAGAGATGCATCAAGAGCACCAACTAGTGAAGATGTACCCTCAAATGTGACCAAGCAGAAGGTTGCAGCTGCCAAGCAGTACATAGAAAACCATTACAAGAAGCAAATGAAGAGCTTGGAAGAAAGGAGGGAGAGACGCCATGTACTGGAAAAGAAGTTGGCTGATGCTGAGGTCTCTCAGGAAGAGCAAAGCAACCTGCTCAAGCATCTAGAGAAGAAGGAAACAGAGTATATGCGTCTTCAAAGGCATAAAATGGGTGCTGATGATTTTGAGCCACTAACAATGATAGGGAGGGGTGCTTTTGGAGAGGTTAGAGTTTGTCGGGAGAAAGCAACTGGCCATGTATATGCCATGAAGAAGCTTAAGAAATCAGAGATGCTTCGAAGAGGCCAGGTTGAACACGTGAAAGCTGAAAGGAATCTATTGGCGGAGGTTGACAGTAATTGTATTGTAAAGCTGTACTGCTCTTTCCAAGATGAAGAGTATTTATATCTTATTATGGAATACTTACCTGGTGGAGATATGATGACTTTGCTGATGAGGAAAGATACTCTAACCGAAGACGAGGCTCGGTTTTATGTTGGTGAAACAGTTTTAGCTATCGAGTCAATCCATAAACATAATTATATTCATAGAGATATCAAGCCGGATAACTTACTTCTTGACAAGGACGGCCATATGAAATTATCAGATTTCGGATTATGTAAACCATTAGATTGTAGTAACCTCCAAGAAAAGGATTTTTCCCAGGGAAGTAACCTCAGTGGTGCTCTTCAAAGTGATGGGCGTCCTGTGGCATCAAAACGCACACAACAGGAACAACTGCAGCATTGGCAAAGGAATAGGCGGATGCTTGCTTATTCAACAGTTGGAACTCCTGATTATATTGCCCCGGAAGTTTTGTTGAAGAAAGGATATGGAATGGAATGTGATTGGTGGTCACTTGGTGCCATCATGTACGAAATGCTTGTGGGATTCCCACCGTTTTACTCAGATGAGCCAATGTCAACTTGCAGGAAGATAGTTAATTGGAGAACTCATTTGAAATTTCCAGAAGAAGCAAAGCTCTCTCCAGAAGCGAAGGATCTAATTAGTAAACTCTTATGCAATGTTGAACAAAGGCTTGGGACCAAGGGTGCAGATGAAATAAAGGCACACCCGTGGTTCAAGGGCATTGAGTGGGATAAGTTGTATCAAATGAAAGCTGCATTTATTCCTGAGGTCAATGATGAATTGGATACTCAAAACTTTGAGAAGTTTGAAGAGACTGAAAACGCAATTCAAACTTCATCAAAATCAGGTCCATGGAGAAAGATGTTGTCATCGAAGGATATCAATTTTGTTGGTTATACGTACAAAAACTTTGAAATCATTGATGATAATCAATTGCCTGGAATCGCTGAACTGAAGAAGAAGACCGCAAAATCTAAAAGACCTTCCATCAAATCACTTTTTGATAACGAATCTGCAATGGCTAATCAACCTGTTCAAGGAAGCTTTCTGAAACTCTTGCCTCCCCAACTAGAAGTCCCTGAGAAACTGATGAGCGCCAATGAGAAGCATTCATAA 1875 41.44 MKTECSSSSLLLLLHPKSRAVHFLTLFSRVSLRFAPLLIAFLLFFLGQVVRKSHYLTYWRHTAQYMYICRTTTMEATRCWFNKFRSKDKPKPSTNKESTGNARDASRAPTSEDVPSNVTKQKVAAAKQYIENHYKKQMKSLEERRERRHVLEKKLADAEVSQEEQSNLLKHLEKKETEYMRLQRHKMGADDFEPLTMIGRGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDEEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDKDGHMKLSDFGLCKPLDCSNLQEKDFSQGSNLSGALQSDGRPVASKRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGFPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKAHPWFKGIEWDKLYQMKAAFIPEVNDELDTQNFEKFEETENAIQTSSKSGPWRKMLSSKDINFVGYTYKNFEIIDDNQLPGIAELKKKTAKSKRPSIKSLFDNESAMANQPVQGSFLKLLPPQLEVPEKLMSANEKHS 624
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8115155 8122650 + CmPI595203_06g006970.1 Cmu06g0697 418357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu06g0697 624 Coils Coil 141 175 - -
Cmu06g0697 624 Pfam Protein kinase C terminal domain 510 554 IPR017892 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu06g0697 624 FunFam Non-specific serine/threonine protein kinase 390 509 - -
Cmu06g0697 624 ProSiteProfiles AGC-kinase C-terminal domain profile. 492 564 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu06g0697 624 Gene3D Phosphorylase Kinase; domain 1 510 520 - -
Cmu06g0697 624 CDD MobB_NDR_LATS-like 126 187 - -
Cmu06g0697 624 MobiDBLite consensus disorder prediction 95 119 - -
Cmu06g0697 624 SMART serkin_6 192 491 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu06g0697 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 311 323 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu06g0697 624 ProSitePatterns Protein kinases ATP-binding region signature. 198 221 IPR017441 GO:0005524(InterPro)
Cmu06g0697 624 Gene3D Transferase(Phosphotransferase) domain 1 276 342 - -
Cmu06g0697 624 SMART pkinase_C_6 492 556 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu06g0697 624 FunFam Non-specific serine/threonine protein kinase 276 343 - -
Cmu06g0697 624 PANTHER SERINE/THREONINE-PROTEIN KINASE 97 558 IPR050236 GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER)
Cmu06g0697 624 Gene3D Phosphorylase Kinase; domain 1 190 275 - -
Cmu06g0697 624 MobiDBLite consensus disorder prediction 88 119 - -
Cmu06g0697 624 FunFam Non-specific serine/threonine protein kinase 163 275 - -
Cmu06g0697 624 SUPERFAMILY Protein kinase-like (PK-like) 167 544 IPR011009 -
Cmu06g0697 624 ProSiteProfiles Protein kinase domain profile. 192 491 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu06g0697 624 CDD STKc_NDR_like 190 555 - -
Cmu06g0697 624 Gene3D Transferase(Phosphotransferase) domain 1 390 509 - -
Cmu06g0697 624 Pfam Protein kinase domain 194 343 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu06g0697 624 Pfam Protein kinase domain 388 491 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g2485 Cmu-Chr1:36712838 Cmu06g0697 Cmu-Chr6:8115155 4.20E-222 dispersed
Cmu04g1323 Cmu-Chr4:27549152 Cmu06g0697 Cmu-Chr6:8115155 1.10E-43 dispersed
Cmu05g1848 Cmu-Chr5:28534477 Cmu06g0697 Cmu-Chr6:8115155 2.10E-183 dispersed
Cmu06g0697 Cmu-Chr6:8115155 Cmu09g0765 Cmu-Chr9:7271030 4.00E-245 dispersed
Cmu06g0697 Cmu-Chr6:8115155 Cmu03g2134 Cmu-Chr3:29754325 2.10E-185 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75602 PF00069 Pkinase 1.40E-65 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu06g0697 K08790 - csv:101205120 1098.96