Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu06g0718 ATGGCCGGTGAGGTAGCGGTGGAGGGTGCTGTGGCGGCAGCCGCGGTGGCGACAGAACTAGCCGATTCCAGTCAGCAGTCCCATAAATTGGAGAGAAAATGGACCTTTTGGTTTGATAACCAGTCTAGGCCGAAGCAAGGTACTGCTTGGGGCACTTCTCTGCGCAAGGTCTATACCTTTGACACCGTCGAAGAATTCTGGTGTTTGTACGATCAGTTATTCAAGCCGAGCAAGTTGCCGGCTAATGCAGATTTTCACCTGTTCAAATCTGGAGTTGAACCGAAATGGGAAGATCCTGAGTGCGCTAATGGAGGAAAATGGACTGTCACGAGCAGTAGAAAGGCTAACCTCGATAACATGTGGTTGGAAACGTTGATGGCTTTGATTGGGGAACAATTTGAGGAGTCTGATGAGATCTGTGGCGTAGTTGCCAGTGTGCGTCAGAGGCAGGACAAACTTGCCCTGTGGACCAAGACAGCAACAAATGAGGCTGCTCAGATGAGCATTGGTAGAAAATGGAAGGAGATTATTGACGTGACCGACAAGATTTCCTTCAGCTTTCATGAGGACTTGAGAAGGGAGAAGTCAGCAAAAGCTCGATACAGTGTTTGA 612 49.02 MAGEVAVEGAVAAAAVATELADSSQQSHKLERKWTFWFDNQSRPKQGTAWGTSLRKVYTFDTVEEFWCLYDQLFKPSKLPANADFHLFKSGVEPKWEDPECANGGKWTVTSSRKANLDNMWLETLMALIGEQFEESDEICGVVASVRQRQDKLALWTKTATNEAAQMSIGRKWKEIIDVTDKISFSFHEDLRREKSAKARYSV 203
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8437201 8439456 - CmPI595203_06g007180.1 Cmu06g0718 418378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu06g0718 203 Gene3D RNA Cap, Translation Initiation Factor Eif4e 19 203 IPR023398 -
Cmu06g0718 203 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 21 195 IPR001040 GO:0000340(PANTHER)|GO:0003723(InterPro)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0006413(InterPro)|GO:0016281(PANTHER)
Cmu06g0718 203 FunFam Eukaryotic translation initiation factor 4E 19 203 - -
Cmu06g0718 203 SUPERFAMILY eIF4e-like 21 196 IPR023398 -
Cmu06g0718 203 Pfam Eukaryotic initiation factor 4E 29 185 IPR001040 GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0006413(InterPro)
Cmu06g0718 203 ProSitePatterns Eukaryotic initiation factor 4E signature. 84 107 IPR019770 GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0006413(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu06g0718 Cmu-Chr6:8437201 Cmu10g2106 Cmu-Chr10:26998623 1.40E-26 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu06g0718 K03259 - csv:101208495 385.185