Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu06g0773 ATGGGTGGCGACGGAAAGCTCTTTACATTGGCTGAAGTCTCTCAGCACAATAACCGCAAAGACTGTTGGTTGATCATTAATGCCAAGGTTTACAATGTAACCGAGTTCTTGGAAGACCATCCCGGTGGCGACGAGGTGTTGTTGTCTGGCACAGGTAAGGATGCAACTGATGATTTTGAAGATGTGGGTCATAGTGAGAGTGCAAGAGAAATGATGAGCAAATACTACATTGGAGAGATGGACGTGTCGACGATCGCAGGACGGTCGGCATACACAACTCCAAAGCAGCCTCATTACAATGAGGATAAGACGACCGAGTTCATCATCAAGCTCCTCCAGTTCTTGGTTCCTCTCGCAATCTTGGGTTTGGCAGTGGGTATCCGCTTTTACACCAAATCAACCTGA 405 47.41 MGGDGKLFTLAEVSQHNNRKDCWLIINAKVYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEMDVSTIAGRSAYTTPKQPHYNEDKTTEFIIKLLQFLVPLAILGLAVGIRFYTKST 134
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 9444374 9447991 - CmPI595203_06g007730.1 Cmu06g0773 418433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu06g0773 134 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037(InterPro)
Cmu06g0773 134 PANTHER CYTOCHROME B5 6 127 IPR050668 GO:0005783(PANTHER)|GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
Cmu06g0773 134 FunFam Cytochrome b5 type B 3 85 - -
Cmu06g0773 134 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 80 IPR001199 -
Cmu06g0773 134 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 6 84 IPR036400 -
Cmu06g0773 134 Gene3D - 3 84 IPR036400 -
Cmu06g0773 134 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Cmu06g0773 134 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Cmu06g0773 134 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Cmu06g0773 134 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Cmu06g0773 134 SMART Cyt_b5_2 8 81 IPR001199 -
Cmu06g0773 134 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu06g0275 Cmu-Chr6:3151632 Cmu06g0773 Cmu-Chr6:9444374 1.90E-27 dispersed
Cmu06g0328 Cmu-Chr6:3836420 Cmu06g0773 Cmu-Chr6:9444374 1.50E-08 dispersed
Cmu06g0773 Cmu-Chr6:9444374 Cmu08g0990 Cmu-Chr8:22137338 4.30E-27 dispersed
Cmu05g0363 Cmu-Chr5:3084850 Cmu06g0773 Cmu-Chr6:9444374 8.00E-58 wgd
Cmu06g0773 Cmu-Chr6:9444374 Cmu07g0244 Cmu-Chr7:2439450 3.00E-49 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu06g0773 K23490 - csv:101213506 247.284