Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu06g1068 ATGGATCACAATCACTGCAATGGAAACTCTGATTCTCATATCAAAATACCAAAAATCAAGTTCACAAAGCTCTTCATCAATGGACAATTCGTTGACTCAATTTCAGGGAAAACTTTTGAGACCATAGATCCGAGAACCGAGGAGGTTATAACGACGGTCGCCGCTGGGGACAAACAAGACGTTGATTTGGCCGTGAAAGCCGCCCGTGAAGCCTTCGATCATGGCCCTTGGCCCCGCATGTCCGGCGCCGAGAGGGGCAGGATAATGATGAAACTAGCGGAATTGATAGATGAACACATGGAGGAATTAGCAGCGTTGGATACGATCGACGCTGGAAAATCGTTTCTAATGGGAAAGATCGTAGATATACCGGGGGCTGCAAATACGCTACGGTACTACGCAGGAGCAGCGGATAAATTCCACGGCGAAGTATTGAAAATGGCTAAACCGCTTCACGGTTACACGTTACTTGAGCCTATTGGAGTGGTGGGTCACATCATACCGTGGAATTTTCCGACGACCATGTTCTGGTTGAAAGTCAGCCCAGCGTTAGCTGCCGGCTGCACCATGATCGTCAAACCGGCCGAACAAACCCCTCTCTCCGCCCTCTTCTACGCCCATCTCGCCAAATTGGCTGGTATACCAGATGGAGTTCTGAACGTGGTGACTGGATATGGACCGACGGCAGGGTCAGGCATTGCGTCCCACATGGACATTGACAAGGTGAGCTTCACGGGATCAACTAAGGTGGGAAGGCTGGTAATGCAGGCAGCAAGTGGCAGTAATCTGAAGCAAGTGTCCTTGGAATTAGGAGGCAAATCACCCCTTCTAGTCTTTGATGATGCAGATCTGGACAAAGCAGTTGATCTTGCTCTCCTAGCTATTTTTTATAACAAGGGGGAAATTTGCGTGGCTGGCTCCCGGGTTTTGGTTCAAGAAGGGATATACGACGAATTCGTGAAAAAGATTACTGAAAAGGTCAAATCTTGGGTTGTGGGAGACCCTTTTGATCCTAAAGTTAAATATGGACCCCAGGTGGACAAAAAGCAAATGGATAAAATTCTGAAATACATAGAACACGGTAAAAAGGAAGGGGCAACATTGGTTACTGGCGGCAAGCGTATAGGCGACGTGGGGTATTACGTTGAGCCCACAATCTTCACAAATGTCAAGGAAGACTCACTAATTGCCCAGGACGAAATATTCGGCCCCGTCCTCTCAGTCATAAAATTCAAGACAATTGAAGACGGAATAAGGAGTGCAAACAACACCAAGTACGGGCTAGCAGCTGGGATAGTGACGAACAGCTTAGACATAGCGAACACAGTGTCGAGGTCGATTCGAGCTGGTACGATTTGGATAAATTGTTACTTCGCTTTTGACCCTAGTTGCCCATTTGGCGGGTACAAGGCCAGTGGATTCGGAAGAGACTCTGGAATGCACGCTATCCAAAAGTATCTTCAAACTAAATCTGTTGTCATTCCTTTGGTTAACACTCCTTGGCTTTGA 1509 47.45 MDHNHCNGNSDSHIKIPKIKFTKLFINGQFVDSISGKTFETIDPRTEEVITTVAAGDKQDVDLAVKAAREAFDHGPWPRMSGAERGRIMMKLAELIDEHMEELAALDTIDAGKSFLMGKIVDIPGAANTLRYYAGAADKFHGEVLKMAKPLHGYTLLEPIGVVGHIIPWNFPTTMFWLKVSPALAAGCTMIVKPAEQTPLSALFYAHLAKLAGIPDGVLNVVTGYGPTAGSGIASHMDIDKVSFTGSTKVGRLVMQAASGSNLKQVSLELGGKSPLLVFDDADLDKAVDLALLAIFYNKGEICVAGSRVLVQEGIYDEFVKKITEKVKSWVVGDPFDPKVKYGPQVDKKQMDKILKYIEHGKKEGATLVTGGKRIGDVGYYVEPTIFTNVKEDSLIAQDEIFGPVLSVIKFKTIEDGIRSANNTKYGLAAGIVTNSLDIANTVSRSIRAGTIWINCYFAFDPSCPFGGYKASGFGRDSGMHAIQKYLQTKSVVIPLVNTPWL 502
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 20402083 20405724 + CmPI595203_06g010680.1 Cmu06g1068 418728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu06g1068 502 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 22 494 - GO:0004029(PANTHER)
Cmu06g1068 502 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 272 461 IPR016163 GO:0016620(InterPro)
Cmu06g1068 502 SUPERFAMILY ALDH-like 16 498 IPR016161 GO:0016491(InterPro)
Cmu06g1068 502 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 26 490 IPR016162 GO:0016491(InterPro)
Cmu06g1068 502 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 26 294 - -
Cmu06g1068 502 FunFam Aldehyde dehydrogenase, putative 464 490 - -
Cmu06g1068 502 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 296 307 IPR016160 GO:0016491(InterPro)
Cmu06g1068 502 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 268 275 IPR029510 GO:0016491(InterPro)
Cmu06g1068 502 Pfam Aldehyde dehydrogenase family 30 492 IPR015590 GO:0016491(InterPro)
Cmu06g1068 502 FunFam Aldehyde dehydrogenase3 272 461 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu06g1068 Cmu-Chr6:20402083 Cmu06g1740 Cmu-Chr6:28374396 1.10E-160 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu06g1068 K12355 - csv:101219029 919.457