Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu06g1102 | ATGCCCTACATGCAAATGGAGCCAGAAGAGAAACATGTGATTCCATCTTCTCAAATGGCGTTGAAATCCCACCATGGATCAAATGATGGTGAGAAAACTAATTTATGGAAAAGGAAAGGAAGAAGGAGAGCAAAAGGACCTTCCATGGAAGGTTTGAAGCAAAAGGAACTTGATCGAAACCTGGAGTTTCCCTCTTCTTCTTGCAAAAGCGTAACATTTCCAAGAAGGCCAGACTTCGGCCAGCTGGGGACTAAATGCTTGGTTAAAGCCAACCACTTCCTAGCAAAAATACCTGAATCAGACATAAGCCATTATAATGTTAAGATAACCCCAGAAGTTACTTCTCGTAAAATGAAGAAGAATATAATGACCGAGTTGGTCAAACATTACAGAAGCACAGAGCTGGGGATGCGACTGCCAGTTTATGATGGAGGAAGCAACCTGTACACAGCCGGATTGCTGCCTTTCATATCAAAAGAGTTCACTGTCATTTTGGCTAATGAAGAAGAGGGGGCAGCCACTCCCAGGGAACGAGAATTTAAAGTGCAGATAAAGTTTGTAACTTTGGCTAGCATGCACCAGTTACGAGAATTACTCGATGGCAAACAAGTTAATAACCCTCAAGAAGCTTTGACCATAATTGACATCGTCTTGAGGGAGCTCCATGCTCAAAGATATATATCAGTTGGGCGATCCTTTTATTCTCCTTGTATTAAGAAGCCTCAGCAGATTGGGGGCGGTTTGCAAGCATGGCGTGGTTTCTATCAAAGCATCCGACCTACTCAAATGGGATTGTCACTAAATATTGACATGTCATCCACTGCATTCATTGAAGCAATCCCTGTCATTGATTTTGTCGCTCAAATTTTAAACAAAGACGTGTACTCAAGAACATTGTCTGATGCTGATCGTATTAAGGTCAAAAAAGTACTTAGAGGTGTAAAAGTTGAAGTTACACACCGAGGAAATGTACGAAGGAAATATCGAATTTCAGGGCTAACATCACAGCCTACAAGAGAGCTAATTTTCCCTCTTGATGAGCAGATGAACATGAAATCTGTAGTTGAATACTTCCAAGAGATGTATGGATATACCATTCAGTATACACATTTGCCTTGCCTTCAAGTAGGAAACCAGAAGAAGGTGAATTATCTACCTATGGAGGCGTGTAAGATACTCAAAGGACAGAGATACACAAAAGGATTGAATGAAAAGCAAATAACTTCCTTGTTGAAGGTTTCATGCCAAAGACCCTCTGATCAGGAAATGGACATTATTCAGACTGTTCATGAGAATGCATATGAGGCAGATCCATATGCAAAAGAATTTGGAATCAATATCGACAACAAGCTTACATCAGTTGAAGCACGAGTCCTTCCATCTCCATGGCTAAAATTTCATGACACTGGAAAAGAAAAGGAACATCAGCCTCAAGTTGGTCAGTGGAATATGATGAATAAGAAAGTAATAGATGGAAGTGTTGTAAGATACTGGGCTTGCATAAATTTCTCACGCAATGTCCAAGAGAACATCGCTCGTGGTTTCTGTCAACAGCTGGTCCAGATGTGCCAAATCTCTGGCATGGAATTTAACCCAGATCCTGCAACTCCTATATACTCAGCAAGACCAGAGCAAGTGAAGAAGGCCTTAAAATTTGTATGTGGTGCAGTTTATAACAAACATGAAGGGAAAGAGTTAGATTTGCTGATAGCTATTCTTCCTGACAACAACGGCTCATTATATGGTGATCTTAAAAGGATCTGTGAAACAGAGTTGGGATTGATATCCCAGTGTTGTCTAACAAAGCACGTCTTCAAGAAGAGCAGACAGTACCTGGCAAATGTGTCACTTAAGATCAACGTCAAGATGGGTGGAAGAAACACTGTTCTTTTAGATGCTTTGCGGTCAAGAATTCCACTAGTCAGTGACATACCAACGATAATCTTCGGAGCTGATGTCACCCATCCAGAATCTGGAGAGGATTCTCTTCCATCAATTGCGGCTGTTGTGGCTTCCCAAGATTGGCCAGAGGTTACAAAATATGCTGGATTGGTATGTGCTCAGCCACACCGGGAGGAACTGATTCAAGATTTATTCAAAACATGGAAAGATCCTCACCGGGGCACGGTTGCCGGGGGTATGATAAGGGAGCTCTTGCTTTCATTCAAGAAGGCCACTGGACAAAAACCATTAAGGATTATATTCTACAGGGATGGGGTCAGTGAGGGTCAGTTCTACCAGGTTCTACTGCACGAACTCGATGCCATACGCAAGGCTTGTGCTTCACTAGAACCCAGTTACCAACCTCCAGTAACTTTTATCATTGTCCAAAAGCGACACCATACCAGACTTTTTGCATCCAATCACAATGATAGGAGTAGCGCTGACAAGAGTGGTAATATTTTACCAGGTACTGTCGTGGATTCAAAGATATGTCATCCAACTGAGTTCGACTTTTATCTATGCAGTCACGCAGGAATCCAGGGAACAAGTCGTCCTGCACACTATCACGTTCTTTGGGATGAGAACAATTTCAGTGCAGATGAAATCCAATCTCTGACTAATAACCTCTGTTACACGTATGCTCGGTGCACAAGATCAGTCTCAGTAGTGCCTCCAGCATACTACGCTCATTTGGCCGCATACAGAGCTCGATTCTACGTAGACCCCGACGCACAGGAGAATGCCAAAAGATGCTGCACTCGAACCACAAATGGATCCTGCGTCCGGCCTCTGCCTGCGCTGAAAGAGAGAGTGAAAAATGTAATGTTCTATTGCTGA | 2781 | 42.65 | MPYMQMEPEEKHVIPSSQMALKSHHGSNDGEKTNLWKRKGRRRAKGPSMEGLKQKELDRNLEFPSSSCKSVTFPRRPDFGQLGTKCLVKANHFLAKIPESDISHYNVKITPEVTSRKMKKNIMTELVKHYRSTELGMRLPVYDGGSNLYTAGLLPFISKEFTVILANEEEGAATPREREFKVQIKFVTLASMHQLRELLDGKQVNNPQEALTIIDIVLRELHAQRYISVGRSFYSPCIKKPQQIGGGLQAWRGFYQSIRPTQMGLSLNIDMSSTAFIEAIPVIDFVAQILNKDVYSRTLSDADRIKVKKVLRGVKVEVTHRGNVRRKYRISGLTSQPTRELIFPLDEQMNMKSVVEYFQEMYGYTIQYTHLPCLQVGNQKKVNYLPMEACKILKGQRYTKGLNEKQITSLLKVSCQRPSDQEMDIIQTVHENAYEADPYAKEFGINIDNKLTSVEARVLPSPWLKFHDTGKEKEHQPQVGQWNMMNKKVIDGSVVRYWACINFSRNVQENIARGFCQQLVQMCQISGMEFNPDPATPIYSARPEQVKKALKFVCGAVYNKHEGKELDLLIAILPDNNGSLYGDLKRICETELGLISQCCLTKHVFKKSRQYLANVSLKINVKMGGRNTVLLDALRSRIPLVSDIPTIIFGADVTHPESGEDSLPSIAAVVASQDWPEVTKYAGLVCAQPHREELIQDLFKTWKDPHRGTVAGGMIRELLLSFKKATGQKPLRIIFYRDGVSEGQFYQVLLHELDAIRKACASLEPSYQPPVTFIIVQKRHHTRLFASNHNDRSSADKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADEIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAYRARFYVDPDAQENAKRCCTRTTNGSCVRPLPALKERVKNVMFYC | 926 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 21445322 | 21450579 | + | CmPI595203_06g011020.1 | Cmu06g1102 | 418762 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu06g1102 | 926 | Gene3D | - | 637 | 926 | IPR036397 | GO:0003676(InterPro) | |
Cmu06g1102 | 926 | Pfam | Piwi domain | 569 | 887 | IPR003165 | GO:0003676(InterPro) | |
Cmu06g1102 | 926 | FunFam | Argonaute 10 | 458 | 631 | - | - | |
Cmu06g1102 | 926 | FunFam | protein argonaute 10-like | 637 | 926 | - | - | |
Cmu06g1102 | 926 | Pfam | Argonaute linker 2 domain | 423 | 466 | IPR032472 | - | |
Cmu06g1102 | 926 | SMART | Piwi_a_2 | 568 | 889 | IPR003165 | GO:0003676(InterPro) | |
Cmu06g1102 | 926 | Pfam | N-terminal domain of argonaute | 85 | 218 | IPR032474 | - | |
Cmu06g1102 | 926 | Pfam | PAZ domain | 284 | 410 | IPR003100 | GO:0003723(InterPro)|GO:0005515(InterPro) | |
Cmu06g1102 | 926 | ProSiteProfiles | Piwi domain profile. | 568 | 889 | IPR003165 | GO:0003676(InterPro) | |
Cmu06g1102 | 926 | Pfam | Mid domain of argonaute | 477 | 552 | IPR032473 | - | |
Cmu06g1102 | 926 | FunFam | Protein argonaute-2 | 273 | 399 | - | - | |
Cmu06g1102 | 926 | Pfam | Argonaute linker 1 domain | 228 | 278 | IPR014811 | - | |
Cmu06g1102 | 926 | CDD | Piwi_ago-like | 438 | 887 | IPR045246 | - | |
Cmu06g1102 | 926 | MobiDBLite | consensus disorder prediction | 1 | 51 | - | - | |
Cmu06g1102 | 926 | SUPERFAMILY | Ribonuclease H-like | 560 | 889 | IPR012337 | - | |
Cmu06g1102 | 926 | Gene3D | paz domain | 273 | 398 | - | - | |
Cmu06g1102 | 926 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 2C | 76 | 895 | - | GO:0003723(PANTHER)|GO:0004521(PANTHER)|GO:0005737(PANTHER)|GO:0035194(PANTHER) | |
Cmu06g1102 | 926 | CDD | PAZ_argonaute_like | 279 | 393 | - | - | |
Cmu06g1102 | 926 | SMART | PAZ_2_a_3 | 284 | 416 | IPR003100 | GO:0003723(InterPro)|GO:0005515(InterPro) | |
Cmu06g1102 | 926 | Gene3D | - | 458 | 631 | - | - | |
Cmu06g1102 | 926 | ProSiteProfiles | PAZ domain profile. | 281 | 394 | IPR003100 | GO:0003723(InterPro)|GO:0005515(InterPro) | |
Cmu06g1102 | 926 | SMART | DUF1785_2 | 227 | 279 | IPR014811 | - | |
Cmu06g1102 | 926 | SUPERFAMILY | PAZ domain | 274 | 433 | IPR036085 | GO:0005515(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu05g0521 | Cmu-Chr5:4438214 | Cmu06g1102 | Cmu-Chr6:21445322 | 0.00E+00 | dispersed | |
Cmu05g2452 | Cmu-Chr5:33539421 | Cmu06g1102 | Cmu-Chr6:21445322 | 1.10E-167 | dispersed | |
Cmu06g1102 | Cmu-Chr6:21445322 | Cmu09g1063 | Cmu-Chr9:10841563 | 1.20E-133 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu06g1102 | K11593 | - | csv:101213206 | 1806.57 |