Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu06g1382 ATGCAGCAGAGGCAAACGAGGTATATGGAGAGGACGAACTCTATGAGGGAAAAAAGGGGCTTGGAGGGTGGAGAAGATGAGCTGCCAGAGAGAAAACGACCAGCTCTAGCTAGTGTGATAGTAGAAGCTCTGAAGGTGGATAGTTTACAAAAGCTGTGCTCGTCATTGGAACCAATACTCCGTAGAGTGGTTAGTGAGGAAGTGGAACGTGCTTTGGCCAAGATAGGTCCTGCTAGAATTTCTGGAAGGTCTTCTCCTAAAAGGATTGAAGGTCCCGATGGAAGAAACTTGCAACTGCACTTTAGGTCTAGATTGTCTCTTCCCCTGTTCACTGGAGGGAAAGTAGAAGGTGAACAGGGTGCAGCAATCCATGTTGTTCTGGTTGATGCCAACACAGGCCATGTAGTAACATCTGGACAGGAAGCCTTGTCTAAATTGGACATTGTGGTACTTGAAGGTGATTTTAACAATGAAGATGATGAAGATTGGACGGAGGAAGAATTTGAAAGTCATGTTGTTAAAGAGCGTGAAGGAAAGAGGCCTCTATTGACTGGTGACCTGCAGGTTACCCTCAAGGAAGGCGTTGGAACACTAGGGGATTTGACCTTCACTGATAATTCAAGTTGGATTAGGAGCAGAAAATTCAGACTTGGGTTAAAGGTGGCTTCTGGGTTTTGTGAAGGTGTACGTATTCGTGAAGCAAAAACTGAAGCTTTTACAGTTAAAGATCACCGAGGAGAATTGTATAAAAAGCATTACCCACCTGCATTAAATGATGAGGTGTGGAGATTGGAGAAGATTGGAAAGGATGGTTCATTTCACAAGCGGCTTAACAAAAATGGAATATTCTCTGTTGAAGACTTTCTCCGAATGGTCGTTCGTGATTCTCAAAAGTTGCGGAGTATCCTTGGAAGTGGTATGTCAAATAAGATGTGGGAGGCTCTCCTAGAACATGCTAAGACCTGTGTCCTGAGCGGGAAGCTGTATATTTATTATCCAGAGGAAACAAGAAATGTTGGTGTTGTTTTTAACAATATCTATGAGCTCAATGGACTGATTACAGGGGAACAATACTTTTCTGCTGATTCTCTGTCTGATAGCCAGAAGGTTTATGTAGATACACTAGTGAATAAAGCATATGAAAATTGGAATCAAGTTGTAGAGTACGATGGCAAGTCACTTTTGAGCTCTAAGCAGCCTAAGAAGTCCAATGCATCCCGAAACGACTTTCAAGGTGGTCATCTTGATATTTCTAGTACTCTAGATCACGGACCACTGCCCCGCATGCCAGTGTCAGTTCAGCATCAGCAGCCTGTAGTGGATTCAGGACTCTCAGTTGCAGGGTATAATGATAATACAGCCACAAGATATTCAACCCAGCCTCAGTTTGTGAATTCAACTTCTCGACCACAGTTTGACAACTCTCCATTTACTTCTAATGACTTGATCGGCAATTCTAACCAAGTTCATATCACAAGAAATGACAATAGTGCTTTTGGTTTGGCTCTTGGTCCTCCACAAGCATCATCTTCAGGGTTTCAGGCGCTCGGTTCCTCTATTCAGGAATCTAATCTGAATCCATTTGACTGGTCAAACAATAGGGACAAGGGAGTTGACGACTTCTTTTCGGAGGATGAGATTCGTATGAGAAGTCATGAAATGCTTGAAAATGAAGATATGCAACAATTGTTGCGAATGTTTAGCATGGGAGGGCATGCATCTGTTAACGTCCATGATGAGGGCTTTTCATTCCCATCATTCATGCCTTCACCAATGCCAAATTTTGATGATCGTAACCGTTCTGGTAAAGCTGTGGTGGGTTGGCTGAAGATCAAAGCTGCAATGAGGTGGGGCTTCTTCATCAGAAAGAAAGCAGCTGAGAGACGTGCGCAGATTGTTGAGTTGGACGAGGAATAG 1917 43.4 MQQRQTRYMERTNSMREKRGLEGGEDELPERKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKIGPARISGRSSPKRIEGPDGRNLQLHFRSRLSLPLFTGGKVEGEQGAAIHVVLVDANTGHVVTSGQEALSKLDIVVLEGDFNNEDDEDWTEEEFESHVVKEREGKRPLLTGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGFCEGVRIREAKTEAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKNGIFSVEDFLRMVVRDSQKLRSILGSGMSNKMWEALLEHAKTCVLSGKLYIYYPEETRNVGVVFNNIYELNGLITGEQYFSADSLSDSQKVYVDTLVNKAYENWNQVVEYDGKSLLSSKQPKKSNASRNDFQGGHLDISSTLDHGPLPRMPVSVQHQQPVVDSGLSVAGYNDNTATRYSTQPQFVNSTSRPQFDNSPFTSNDLIGNSNQVHITRNDNSAFGLALGPPQASSSGFQALGSSIQESNLNPFDWSNNRDKGVDDFFSEDEIRMRSHEMLENEDMQQLLRMFSMGGHASVNVHDEGFSFPSFMPSPMPNFDDRNRSGKAVVGWLKIKAAMRWGFFIRKKAAERRAQIVELDEE 638
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 24992872 24998958 + CmPI595203_06g013820.1 Cmu06g1382 419042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu06g1382 638 PANTHER OS02G0177800 PROTEIN 16 629 IPR012416 GO:0003700(PANTHER)|GO:0005516(InterPro)|GO:0005634(PANTHER)|GO:0043565(PANTHER)|GO:0080142(PANTHER)
Cmu06g1382 638 Pfam Calmodulin binding protein-like N-terminal domain 97 244 IPR046831 -
Cmu06g1382 638 MobiDBLite consensus disorder prediction 394 421 - -
Cmu06g1382 638 Pfam Calmodulin binding protein C-terminal domain 327 389 IPR046829 -
Cmu06g1382 638 MobiDBLite consensus disorder prediction 1 29 - -
Cmu06g1382 638 MobiDBLite consensus disorder prediction 394 415 - -
Cmu06g1382 638 MobiDBLite consensus disorder prediction 10 29 - -
Cmu06g1382 638 Pfam Calmodulin binding protein central domain 256 322 IPR046830 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu04g1138 Cmu-Chr4:25914070 Cmu06g1382 Cmu-Chr6:24992872 9.30E-84 dispersed
Cmu04g1139 Cmu-Chr4:25945562 Cmu06g1382 Cmu-Chr6:24992872 6.40E-88 dispersed
Cmu06g1382 Cmu-Chr6:24992872 Cmu06g1723 Cmu-Chr6:28236858 1.90E-93 dispersed
Cmu06g1382 Cmu-Chr6:24992872 Cmu02g1510 Cmu-Chr2:28801728 2.10E-63 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu06g1382 - - - 0.0