Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu06g1458 ATGAAGAACTTACCTCTCTACATCCTCCGATCTCCTCCGCGTTCTCTTCTCCGGTTGCCGCTACCGGTCGCCAGCCCCTTCTTGTCTCACCTCTCCTATTTCATAACCATCTCTCTCTTAGGCTTTGGAGCTCTAAAGCTCACCAAAACTAGAAACTCCTCCTCCCCAAATGACCTCAACATTTTCTTCACCTCCGTCTCTGCCGTCTCCGTTTCAAGCATGTCTGTCATTGAAATGGAAGTTTTTTCCAATTTCCAACTCCTCATCATCACCACCCTCATGTTCCTCGGCGGCGAAGTCTTCGTCTCTGCCGTCGGGTTCCAACTCTCTCGCCGGTTCAAATACTTGAACGAGAAAAACCAAGTCGATTCGGCTCGGTCCATTGAGATGGAAAGTGGGACGTCGTCATCAACGACGGCCACCATTGATGAGTTGAGTATCTCAAAATCATGTTCAAAGCTTTTGGGTCGTACGATAATTGGATATCTTTTGACGACAAATGGTGTTGGTTCTTGTTTAATCTTCATTTACATCATCACGATCCCCCATGCAAAGCAAGTGCTTGAAAGCAAAGGCATCAACTTCCTTACTTTTTCAATTTTTAGTACAGTTTCTACTTTTACCAACTGTGGCTTCATACCTACTAATGAAAATATGATCGCTTTCAAGAACAACTCTGGCCTTTTGCTCATACTCATCTCGCAGGTGTTGTTGGGAGGTTGTTTATATCCGGTGGGTCTCCGGTTGGCAATAATGGCGGCGGCGAAGGTGACGGGGAAGAAGGAATGGAGATACATATTGAAGAACTACTCAGAGATGGGGTATTCTCATCTCTTGTCGGGGCTCCGGTGTGGATTTCTGGCCGTGACGGCGGTGGGATTCATAATTTTGCAATTGATTATCTTTTGCTCATTGGAATGGAACAACTCCGCCGGAATTTGGGATGGCCTGAATCCCTACCAGAAGTTTGTGGGATCACTTTTTCAGGTGACAAACTCAAGACATGCCGGAGAGTCGGTGGTGGATATCTCGGTCATCTCGCCCGCGATCTTGGTAGTTTTTGTTGTCATGATGTATCTCCCACCATACACAACCTTTTTACCCATAAGGAACAAAGAGATAGCTTCAATGTCACATGGGAAGGACAAAAGACAACACTTAGTGGAATTATTCACATTCTCACAGCTCTCCTATTTGGCCATTTTTATCATTCTCATATGCATCACAGAGAAAGAAAAGCTAAGAGATGATCCCCTTAACTTTACCGTTCTCAACATCACCCTTGAAGTGATCAGTGCATATGGAAATGTTGGGTTCTCAAGTGGGTATAGCTGCAAAAGACAAGTAAAAGTTGATAGCTCTTGCAAAGATGCATGGTATGGATTTGCTGGAAGATGGAGTCCAAAGGGAAAATTCATTCTAATTCTTGTCATGATCTTTGGAAGAATGAAAAGTTTTAGTATGCATAGTGGTAGAGCTTGGAAATTATCATGA 1494 44.11 MKNLPLYILRSPPRSLLRLPLPVASPFLSHLSYFITISLLGFGALKLTKTRNSSSPNDLNIFFTSVSAVSVSSMSVIEMEVFSNFQLLIITTLMFLGGEVFVSAVGFQLSRRFKYLNEKNQVDSARSIEMESGTSSSTTATIDELSISKSCSKLLGRTIIGYLLTTNGVGSCLIFIYIITIPHAKQVLESKGINFLTFSIFSTVSTFTNCGFIPTNENMIAFKNNSGLLLILISQVLLGGCLYPVGLRLAIMAAAKVTGKKEWRYILKNYSEMGYSHLLSGLRCGFLAVTAVGFIILQLIIFCSLEWNNSAGIWDGLNPYQKFVGSLFQVTNSRHAGESVVDISVISPAILVVFVVMMYLPPYTTFLPIRNKEIASMSHGKDKRQHLVELFTFSQLSYLAIFIILICITEKEKLRDDPLNFTVLNITLEVISAYGNVGFSSGYSCKRQVKVDSSCKDAWYGFAGRWSPKGKFILILVMIFGRMKSFSMHSGRAWKLS 497
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 25836920 25842256 + CmPI595203_06g014580.1 Cmu06g1458 419118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu06g1458 497 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 21 494 IPR051143 GO:0005886(PANTHER)|GO:0008324(PANTHER)
Cmu06g1458 497 Pfam Cation transport protein 46 488 IPR003445 GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu06g1456 Cmu-Chr6:25797116 Cmu06g1458 Cmu-Chr6:25836920 2.10E-109 dispersed
Cmu06g1457 Cmu-Chr6:25805342 Cmu06g1458 Cmu-Chr6:25836920 1.90E-60 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu06g1458 K24976 - csv:101206239 817.764