Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu06g1488 | ATGCCGGATACACCAACATCGCCGAAGAGCGGTGGCCGTCTGGTGCTAATGGAGAATCTGCTCGGACTTCTCCGTATTCGCATCATTCGTGGTGTTAATCTTGCTGTTCGTGATGTTCGCAGTAGTGATCCTTATGTTGTCATCAAGATGGGAAAGCAAAAACTGAAGACAAGGGTGATAAAGAAGGATGTTAATCCTGTATGGAATGAAGATCTAACTCTTTCTATCAGTGATCCGAATCTTCCAATTAAGCTGACCGTTTACGATCACGACACATTTAGCAAGGATGATAAAATGGGATATGCTGAGTTCGATATCAAAGCATTTATGGAAGCTCTGAAGATGAACTTGAAAAATCTTCCCAGTGGAACTACTATCTCACGAATGCTACCGGCCAGGCAAAACTGTCTCGCTGAAGAGAGCTGTGTCGTCTGGAAAGATGGTAAAGTAGTCCAAGATATCTACCTTAGATTGAAAAATGTCGAATGCGGAGAAGTCGAAATTCAGTTGCAGTGGATTGATCTTCCGAACCCCAAAGGCTGA | 543 | 43.46 | MPDTPTSPKSGGRLVLMENLLGLLRIRIIRGVNLAVRDVRSSDPYVVIKMGKQKLKTRVIKKDVNPVWNEDLTLSISDPNLPIKLTVYDHDTFSKDDKMGYAEFDIKAFMEALKMNLKNLPSGTTISRMLPARQNCLAEESCVVWKDGKVVQDIYLRLKNVECGEVEIQLQWIDLPNPKG | 180 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 26154725 | 26156994 | + | CmPI595203_06g014880.1 | Cmu06g1488 | 419148 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu06g1488 | 180 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 22 | 166 | IPR035892 | - | |
Cmu06g1488 | 180 | CDD | C2_ArfGAP | 21 | 164 | - | - | |
Cmu06g1488 | 180 | ProSiteProfiles | C2 domain profile. | 8 | 119 | IPR000008 | - | |
Cmu06g1488 | 180 | Pfam | C2 domain | 22 | 109 | IPR000008 | - | |
Cmu06g1488 | 180 | Gene3D | C2 domain | 18 | 179 | IPR035892 | - | |
Cmu06g1488 | 180 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 17 | 178 | IPR044562 | - | |
Cmu06g1488 | 180 | SMART | C2_3c | 23 | 118 | IPR000008 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu01g1077 | Cmu-Chr1:17200578 | Cmu06g1488 | Cmu-Chr6:26154725 | 2.20E-33 | dispersed | |
Cmu01g2459 | Cmu-Chr1:36550089 | Cmu06g1488 | Cmu-Chr6:26154725 | 1.10E-34 | dispersed | |
Cmu06g1488 | Cmu-Chr6:26154725 | Cmu08g1362 | Cmu-Chr8:25818043 | 1.70E-10 | dispersed | |
Cmu05g1214 | Cmu-Chr5:12500559 | Cmu06g1488 | Cmu-Chr6:26154725 | 1.40E-67 | transposed | |
Cmu07g0642 | Cmu-Chr7:9786660 | Cmu06g1488 | Cmu-Chr6:26154725 | 1.80E-49 | transposed | |
Cmu04g1098 | Cmu-Chr4:25582353 | Cmu06g1488 | Cmu-Chr6:26154725 | 2.00E-73 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu06g1488 | - | - | - | 0.0 |