Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu06g1511 ATGATCTTCAACGATGGCAATGAAGAGACTCCCACAATTCGTTCAACAGTCGCACGAAATTCTCGAAGAAAGCTGTACAATACAATGACCGATAGCGCTAAATCAATTCTCGAAGAGGAGACTTCGAAGCTCGAAACCAAGTCCAAGCGCGGCTCAGATGTCGAAGATGCTGATGTTACTGTGAAGAAGTTTAAAACGGAAGCTTCTGCCAATGAAACTGGACTCTGTACCGCTAGAAACTTGGAAGCTGTTAATGGTGAAGAAGAACTTAAGGTCATCAGGAGGGGACTCGAGTTTGAAATTGAAGCGGATGCGGCCGAGGATAAAGGGTCTAGGCATACAATGGAAGATGCCTGGGTTTTGCTCTTGGATGCCAGCTTGGACTTTCCTGGGAAATTGAGATGTGCACATTTTGCTATCTATGATGGACACGGGGGTCGGTTAGCTGCCGAGCACGCTCAAAAGCATTTGCACAAGAATGTTCTCTCGGCCGGGTTACCACGTGAGTTGTTGGATGTAAAAGCAACTAAAAAGGCAATACTTGATGGGTTCCGGAAAACGGACGAGGCTCTTCTTCAAGAAAGTTCTGCAGGGGGATGGCAGGATGGTGCTACTGCTGTTTGCGTTTGGGTCTTAGGTCAAACAGTGTTTGTTGCTAATGTTGGTGATGCTAAAGCAGTTGTAGCCCGATCTTTGACTACTGATAAATCGACGAATAATCCTAATGGTGGAAGCTCTTTAAAGGCTATTGTTTTGACAAGGGAACATAAGGCAATCTACCCACAGGAGAGAGCTCGCATTCAAAAGGCTGGTGGCGTTGTTGGTTCAAATGGTCGATTGCAGGGTCGTCTTGAAGTTTCTCGGGCATTCGGAGATCGCCAATTTAAAAAGTTGGGCGTTATCGCAACTCCAGACATTCATTCTTTTGAATTGACTGATAGGGAGCATTTTATCATTCTTGGATGCGATGGACTTTGGGGGGTTTTTGGACCAAGTGATGCCGTTGATTTTGTCCAGAAATTATTGAAGGATGGCCTGCCCATAGCATCAATAAGTCGACGTCTCGTGAGGGAAGCAATTCGTGAACGGCGCTGCAAAGATAACTGTACCGCAATTGTCATTGTCTTCAGGCCCAAATGA 1140 45.88 MIFNDGNEETPTIRSTVARNSRRKLYNTMTDSAKSILEEETSKLETKSKRGSDVEDADVTVKKFKTEASANETGLCTARNLEAVNGEEELKVIRRGLEFEIEADAAEDKGSRHTMEDAWVLLLDASLDFPGKLRCAHFAIYDGHGGRLAAEHAQKHLHKNVLSAGLPRELLDVKATKKAILDGFRKTDEALLQESSAGGWQDGATAVCVWVLGQTVFVANVGDAKAVVARSLTTDKSTNNPNGGSSLKAIVLTREHKAIYPQERARIQKAGGVVGSNGRLQGRLEVSRAFGDRQFKKLGVIATPDIHSFELTDREHFIILGCDGLWGVFGPSDAVDFVQKLLKDGLPIASISRRLVREAIRERRCKDNCTAIVIVFRPK 379
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 26379242 26389728 + CmPI595203_06g015110.1 Cmu06g1511 419171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu06g1511 379 SMART PP2C_4 98 374 IPR001932 -
Cmu06g1511 379 SUPERFAMILY PP2C-like 100 377 IPR036457 -
Cmu06g1511 379 FunFam Probable protein phosphatase 2C 67 90 378 - -
Cmu06g1511 379 CDD PP2Cc 106 376 IPR001932 -
Cmu06g1511 379 Gene3D - 87 377 IPR036457 -
Cmu06g1511 379 ProSiteProfiles PPM-type phosphatase domain profile. 102 376 IPR001932 -
Cmu06g1511 379 PANTHER PROTEIN PHOSPHATASE 2C 70 376 IPR015655 GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0006470(PANTHER)
Cmu06g1511 379 Pfam Protein phosphatase 2C 107 364 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu06g1511 Cmu-Chr6:26379242 Cmu11g1415 Cmu-Chr11:26375805 1.50E-24 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu06g1511 K17500 - csv:101216467 637.106